New insights from uncultivated genomes of the global human gut microbiome
Nayfach, Stephen, Shi, Zhou Jason, Seshadri, Rekha, Pollard, Katherine S., Kyrpides, Nikos C.
Published in Nature (London) (01.04.2019)
Published in Nature (London) (01.04.2019)
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Published in Nucleic acids research (08.01.2021)
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A unified catalog of 204,938 reference genomes from the human gut microbiome
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Published in Science (American Association for the Advancement of Science) (16.11.2018)
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Published in Science (American Association for the Advancement of Science) (20.01.2017)
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Published in Frontiers in microbiology (22.08.2018)
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Published in Nucleic acids research (08.01.2021)
Published in Nucleic acids research (08.01.2021)
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Published in Nucleic acids research (08.01.2021)
Published in Nucleic acids research (08.01.2021)
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Giant virus diversity and host interactions through global metagenomics
Schulz, Frederik, Roux, Simon, Paez-Espino, David, Jungbluth, Sean, Walsh, David A., Denef, Vincent J., McMahon, Katherine D., Konstantinidis, Konstantinos T., Eloe-Fadrosh, Emiley A., Kyrpides, Nikos C., Woyke, Tanja
Published in Nature (London) (20.02.2020)
Published in Nature (London) (20.02.2020)
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Analysis of 1,000+ Type-Strain Genomes Substantially Improves Taxonomic Classification of Alphaproteobacteria
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Published in Frontiers in microbiology (07.04.2020)
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Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes
García-López, Marina, Meier-Kolthoff, Jan P., Tindall, Brian J., Gronow, Sabine, Woyke, Tanja, Kyrpides, Nikos C., Hahnke, Richard L., Göker, Markus
Published in Frontiers in microbiology (23.09.2019)
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Published in Nucleic acids research (06.01.2023)
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IMG/VR v4: an expanded database of uncultivated virus genomes within a framework of extensive functional, taxonomic, and ecological metadata
Camargo, Antonio Pedro, Nayfach, Stephen, Chen, I-Min A, Palaniappan, Krishnaveni, Ratner, Anna, Chu, Ken, Ritter, Stephan J, Reddy, T B K, Mukherjee, Supratim, Schulz, Frederik, Call, Lee, Neches, Russell Y, Woyke, Tanja, Ivanova, Natalia N, Eloe-Fadrosh, Emiley A, Kyrpides, Nikos C, Roux, Simon
Published in Nucleic acids research (06.01.2023)
Published in Nucleic acids research (06.01.2023)
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A thermostable Cas9 with increased lifetime in human plasma
Harrington, Lucas B., Paez-Espino, David, Staahl, Brett T., Chen, Janice S., Ma, Enbo, Kyrpides, Nikos C., Doudna, Jennifer A.
Published in Nature communications (10.11.2017)
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Comparative metagenomic and metatranscriptomic analysis of hindgut paunch microbiota in wood- and dung-feeding higher termites
He, Shaomei, Ivanova, Natalia, Kirton, Edward, Allgaier, Martin, Bergin, Claudia, Scheffrahn, Rudolf H, Kyrpides, Nikos C, Warnecke, Falk, Tringe, Susannah G, Hugenholtz, Philip
Published in PloS one (12.04.2013)
Published in PloS one (12.04.2013)
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Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome
Nayfach, Stephen, Páez-Espino, David, Call, Lee, Low, Soo Jen, Sberro, Hila, Ivanova, Natalia N., Proal, Amy D., Fischbach, Michael A., Bhatt, Ami S., Hugenholtz, Philip, Kyrpides, Nikos C.
Published in Nature microbiology (01.07.2021)
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Published in Nature (London) (25.07.2013)
Published in Nature (London) (25.07.2013)
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IMG/VR v.2.0: an integrated data management and analysis system for cultivated and environmental viral genomes
Paez-Espino, David, Roux, Simon, Chen, I-Min A, Palaniappan, Krishna, Ratner, Anna, Chu, Ken, Huntemann, Marcel, Reddy, T B K, Pons, Joan Carles, Llabrés, Mercè, Eloe-Fadrosh, Emiley A, Ivanova, Natalia N, Kyrpides, Nikos C
Published in Nucleic acids research (08.01.2019)
Published in Nucleic acids research (08.01.2019)
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Markowitz, Victor M, Chen, I-Min A, Palaniappan, Krishna, Chu, Ken, Szeto, Ernest, Pillay, Manoj, Ratner, Anna, Huang, Jinghua, Woyke, Tanja, Huntemann, Marcel, Anderson, Iain, Billis, Konstantinos, Varghese, Neha, Mavromatis, Konstantinos, Pati, Amrita, Ivanova, Natalia N, Kyrpides, Nikos C
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Published in Nucleic acids research (01.01.2014)
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