Virulence genes are a signature of the microbiome in the colorectal tumor microenvironment
Burns, Michael B, Lynch, Joshua, Starr, Timothy K, Knights, Dan, Blekhman, Ran
Published in Genome medicine (24.06.2015)
Published in Genome medicine (24.06.2015)
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Journal Article
Social networks predict gut microbiome composition in wild baboons
Tung, Jenny, Barreiro, Luis B, Burns, Michael B, Grenier, Jean-Christophe, Lynch, Josh, Grieneisen, Laura E, Altmann, Jeanne, Alberts, Susan C, Blekhman, Ran, Archie, Elizabeth A
Published in eLife (16.03.2015)
Published in eLife (16.03.2015)
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Journal Article
APOBEC3B is an enzymatic source of mutation in breast cancer
Burns, Michael B., Lackey, Lela, Carpenter, Michael A., Rathore, Anurag, Land, Allison M., Leonard, Brandon, Refsland, Eric W., Kotandeniya, Delshanee, Tretyakova, Natalia, Nikas, Jason B., Yee, Douglas, Temiz, Nuri A., Donohue, Duncan E., McDougle, Rebecca M., Brown, William L., Law, Emily K., Harris, Reuben S.
Published in Nature (London) (21.02.2013)
Published in Nature (London) (21.02.2013)
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Journal Article
APOBEC3A catalyzes mutation and drives carcinogenesis in vivo
Law, Emily K, Levin-Klein, Rena, Jarvis, Matthew C, Kim, Hyoung, Argyris, Prokopios P, Carpenter, Michael A, Starrett, Gabriel J, Temiz, Nuri A, Larson, Lindsay K, Durfee, Cameron, Burns, Michael B, Vogel, Rachel I, Stavrou, Spyridon, Aguilera, Alexya N, Wagner, Sandra, Largaespada, David A, Starr, Timothy K, Ross, Susan R, Harris, Reuben S
Published in The Journal of experimental medicine (07.12.2020)
Published in The Journal of experimental medicine (07.12.2020)
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Journal Article
APOBEC3 proteins mediate the clearance of foreign DNA from human cells
Harris, Reuben S, Stenglein, Mark D, Burns, Michael B, Li, Ming, Lengyel, Joy
Published in Nature structural & molecular biology (01.02.2010)
Published in Nature structural & molecular biology (01.02.2010)
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Journal Article
Colorectal cancer mutational profiles correlate with defined microbial communities in the tumor microenvironment
Burns, Michael B, Montassier, Emmanuel, Abrahante, Juan, Priya, Sambhawa, Niccum, David E, Khoruts, Alexander, Starr, Timothy K, Knights, Dan, Blekhman, Ran
Published in PLoS genetics (20.06.2018)
Published in PLoS genetics (20.06.2018)
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Journal Article
Extensive somatic L1 retrotransposition in colorectal tumors
Solyom, Szilvia, Ewing, Adam D, Rahrmann, Eric P, Doucet, Tara, Nelson, Heather H, Burns, Michael B, Harris, Reuben S, Sigmon, David F, Casella, Alex, Erlanger, Bracha, Wheelan, Sarah, Upton, Kyle R, Shukla, Ruchi, Faulkner, Geoffrey J, Largaespada, David A, Kazazian, Jr, Haig H
Published in Genome research (01.12.2012)
Published in Genome research (01.12.2012)
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Journal Article
Gut Microbiome of Coexisting BaAka Pygmies and Bantu Reflects Gradients of Traditional Subsistence Patterns
Gomez, Andres, Petrzelkova, Klara J., Burns, Michael B., Yeoman, Carl J., Amato, Katherine R., Vlckova, Klara, Modry, David, Todd, Angelique, Jost Robinson, Carolyn A., Remis, Melissa J., Torralba, Manolito G., Morton, Elise, Umaña, Juan D., Carbonero, Franck, Gaskins, H. Rex, Nelson, Karen E., Wilson, Brenda A., Stumpf, Rebecca M., White, Bryan A., Leigh, Steven R., Blekhman, Ran
Published in Cell reports (Cambridge) (08.03.2016)
Published in Cell reports (Cambridge) (08.03.2016)
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Journal Article
Narrowband ultraviolet B response in cutaneous T-cell lymphoma is characterized by increased bacterial diversity and reduced Staphylococcus aureus and Staphylococcus lugdunensis
Hooper, Madeline J, Enriquez, Gail L, Veon, Francesca L, LeWitt, Tessa M, Sweeney, Dagmar, Green, Stefan J, Seed, Patrick C, Choi, Jaehyuk, Guitart, Joan, Burns, Michael B, Zhou, Xiaolong A
Published in Frontiers in immunology (11.11.2022)
Published in Frontiers in immunology (11.11.2022)
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Journal Article
APOBEC3B upregulation and genomic mutation patterns in serous ovarian carcinoma
Leonard, Brandon, Hart, Steven N, Burns, Michael B, Carpenter, Michael A, Temiz, Nuri A, Rathore, Anurag, Vogel, Rachel I, Nikas, Jason B, Law, Emily K, Brown, William L, Li, Ying, Zhang, Yuji, Maurer, Matthew J, Oberg, Ann L, Cunningham, Julie M, Shridhar, Viji, Bell, Debra A, April, Craig, Bentley, David, Bibikova, Marina, Cheetham, R Keira, Fan, Jian-Bing, Grocock, Russell, Humphray, Sean, Kingsbury, Zoya, Peden, John, Chien, Jeremy, Swisher, Elizabeth M, Hartmann, Lynn C, Kalli, Kimberly R, Goode, Ellen L, Sicotte, Hugues, Kaufmann, Scott H, Harris, Reuben S
Published in Cancer research (Chicago, Ill.) (15.12.2013)
Published in Cancer research (Chicago, Ill.) (15.12.2013)
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Journal Article
Gut Microbiota Has a Widespread and Modifiable Effect on Host Gene Regulation
Richards, Allison L, Muehlbauer, Amanda L, Alazizi, Adnan, Burns, Michael B, Findley, Anthony, Messina, Francesco, Gould, Trevor J, Cascardo, Camilla, Pique-Regi, Roger, Blekhman, Ran, Luca, Francesca
Published in mSystems (03.09.2019)
Published in mSystems (03.09.2019)
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Journal Article
Transposon mutagenesis screen in mice identifies TM9SF2 as a novel colorectal cancer oncogene
Clark, Christopher R., Maile, Makayla, Blaney, Patrick, Hellweg, Stefano R., Strauss, Anna, Durose, Wilaiwan, Priya, Sambhawa, Habicht, Juri, Burns, Michael B., Blekhman, Ran, Abrahante, Juan E., Starr, Timothy K.
Published in Scientific reports (17.10.2018)
Published in Scientific reports (17.10.2018)
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Journal Article
Gut microbiota analyses of cutaneous T-cell lymphoma patients undergoing narrowband ultraviolet B therapy reveal alterations associated with disease treatment
Nguyen, William Q, Chrisman, Lauren P, Enriquez, Gail L, Hooper, Madeline J, Griffin, Teresa L, Ahmad, Merjaan, Rahman, Sophia, Green, Stefan J, Seed, Patrick C, Guitart, Joan, Burns, Michael B, Zhou, Xiaolong A
Published in Frontiers in immunology (11.01.2024)
Published in Frontiers in immunology (11.01.2024)
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Journal Article
Mapping gastrointestinal gene expression patterns in wild primates and humans via fecal RNA-seq
Sharma, Ashok Kumar, Pafčo, Barbora, Vlčková, Klára, Červená, Barbora, Kreisinger, Jakub, Davison, Samuel, Beeri, Karen, Fuh, Terence, Leigh, Steven R, Burns, Michael B, Blekhman, Ran, Petrželková, Klára J, Gomez, Andres
Published in BMC genomics (14.06.2019)
Published in BMC genomics (14.06.2019)
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Journal Article
R-Spondins 2 and 3 Are Overexpressed in a Subset of Human Colon and Breast Cancers
Conboy, Caitlin B, Vélez-Reyes, Germán L, Rathe, Susan K, Abrahante, Juan E, Temiz, Nuri A, Burns, Michael B, Harris, Reuben S, Starr, Timothy K, Largaespada, David A
Published in DNA and cell biology (01.01.2021)
Published in DNA and cell biology (01.01.2021)
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