Cervicovaginal microbiome and natural history of HPV in a longitudinal study
Usyk, Mykhaylo, Zolnik, Christine P, Castle, Philip E, Porras, Carolina, Herrero, Rolando, Gradissimo, Ana, Gonzalez, Paula, Safaeian, Mahboobeh, Schiffman, Mark, Burk, Robert D
Published in PLoS pathogens (26.03.2020)
Published in PLoS pathogens (26.03.2020)
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An Observational Study of Deep Learning and Automated Evaluation of Cervical Images for Cancer Screening
Hu, Liming, Bell, David, Antani, Sameer, Xue, Zhiyun, Yu, Kai, Horning, Matthew P, Gachuhi, Noni, Wilson, Benjamin, Jaiswal, Mayoore S, Befano, Brian, Long, L Rodney, Herrero, Rolando, Einstein, Mark H, Burk, Robert D, Demarco, Maria, Gage, Julia C, Rodriguez, Ana Cecilia, Wentzensen, Nicolas, Schiffman, Mark
Published in JNCI : Journal of the National Cancer Institute (01.09.2019)
Published in JNCI : Journal of the National Cancer Institute (01.09.2019)
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Journal Article
Classification of papillomaviruses (PVs) based on 189 PV types and proposal of taxonomic amendments
Bernard, Hans-Ulrich, Burk, Robert D, Chen, Zigui, van Doorslaer, Koenraad, Hausen, Harald zur, de Villiers, Ethel-Michele
Published in Virology (New York, N.Y.) (25.05.2010)
Published in Virology (New York, N.Y.) (25.05.2010)
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Journal Article
HPV16 E7 Genetic Conservation Is Critical to Carcinogenesis
Mirabello, Lisa, Yeager, Meredith, Yu, Kai, Clifford, Gary M., Xiao, Yanzi, Zhu, Bin, Cullen, Michael, Boland, Joseph F., Wentzensen, Nicolas, Nelson, Chase W., Raine-Bennett, Tina, Chen, Zigui, Bass, Sara, Song, Lei, Yang, Qi, Steinberg, Mia, Burdett, Laurie, Dean, Michael, Roberson, David, Mitchell, Jason, Lorey, Thomas, Franceschi, Silvia, Castle, Philip E., Walker, Joan, Zuna, Rosemary, Kreimer, Aimée R., Beachler, Daniel C., Hildesheim, Allan, Gonzalez, Paula, Porras, Carolina, Burk, Robert D., Schiffman, Mark
Published in Cell (07.09.2017)
Published in Cell (07.09.2017)
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Journal Article
Gut microbiome composition in the Hispanic Community Health Study/Study of Latinos is shaped by geographic relocation, environmental factors, and obesity
Kaplan, Robert C, Wang, Zheng, Usyk, Mykhaylo, Sotres-Alvarez, Daniela, Daviglus, Martha L, Schneiderman, Neil, Talavera, Gregory A, Gellman, Marc D, Thyagarajan, Bharat, Moon, Jee-Young, Vázquez-Baeza, Yoshiki, McDonald, Daniel, Williams-Nguyen, Jessica S, Wu, Michael C, North, Kari E, Shaffer, Justin, Sollecito, Christopher C, Qi, Qibin, Isasi, Carmen R, Wang, Tao, Knight, Rob, Burk, Robert D
Published in Genome Biology (01.11.2019)
Published in Genome Biology (01.11.2019)
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Journal Article
Niche adaptation and viral transmission of human papillomaviruses from archaic hominins to modern humans
Chen, Zigui, DeSalle, Rob, Schiffman, Mark, Herrero, Rolando, Wood, Charles E, Ruiz, Julio C, Clifford, Gary M, Chan, Paul K S, Burk, Robert D
Published in PLoS pathogens (01.11.2018)
Published in PLoS pathogens (01.11.2018)
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Journal Article
ICTV Virus Taxonomy Profile: Papillomaviridae
Van Doorslaer, Koenraad, Chen, Zigui, Bernard, Hans-Ulrich, Chan, Paul K S, DeSalle, Rob, Dillner, Joakim, Forslund, Ola, Haga, Takeshi, McBride, Alison A, Villa, Luisa L, Burk, Robert D, Ictv Report Consortium
Published in Journal of general virology (01.08.2018)
Published in Journal of general virology (01.08.2018)
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Journal Article
Human Papillomavirus DNA Methylation as a Biomarker for Cervical Precancer: Consistency across 12 Genotypes and Potential Impact on Management of HPV-Positive Women
Clarke, Megan A, Gradissimo, Ana, Schiffman, Mark, Lam, Jessica, Sollecito, Christopher C, Fetterman, Barbara, Lorey, Thomas, Poitras, Nancy, Raine-Bennett, Tina R, Castle, Philip E, Wentzensen, Nicolas, Burk, Robert D
Published in Clinical cancer research (01.05.2018)
Published in Clinical cancer research (01.05.2018)
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Journal Article
Evolution and taxonomic classification of human papillomavirus 16 (HPV16)-related variant genomes: HPV31, HPV33, HPV35, HPV52, HPV58 and HPV67
Chen, Zigui, Schiffman, Mark, Herrero, Rolando, Desalle, Rob, Anastos, Kathryn, Segondy, Michel, Sahasrabuddhe, Vikrant V, Gravitt, Patti E, Hsing, Ann W, Burk, Robert D
Published in PloS one (27.05.2011)
Published in PloS one (27.05.2011)
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Journal Article
Mutations in the HPV16 genome induced by APOBEC3 are associated with viral clearance
Zhu, Bin, Xiao, Yanzi, Yeager, Meredith, Clifford, Gary, Wentzensen, Nicolas, Cullen, Michael, Boland, Joseph F., Bass, Sara, Steinberg, Mia K., Raine-Bennett, Tina, Lee, DongHyuk, Burk, Robert D., Pinheiro, Maisa, Song, Lei, Dean, Michael, Nelson, Chase W., Burdett, Laurie, Yu, Kai, Roberson, David, Lorey, Thomas, Franceschi, Silvia, Castle, Philip E., Walker, Joan, Zuna, Rosemary, Schiffman, Mark, Mirabello, Lisa
Published in Nature communications (14.02.2020)
Published in Nature communications (14.02.2020)
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Journal Article
Comparison of Fecal Collection Methods for Microbiome and Metabolomics Studies
Wang, Zheng, Zolnik, Christine P, Qiu, Yunping, Usyk, Mykhaylo, Wang, Tao, Strickler, Howard D, Isasi, Carmen R, Kaplan, Robert C, Kurland, Irwin J, Qi, Qibin, Burk, Robert D
Published in Frontiers in cellular and infection microbiology (28.08.2018)
Published in Frontiers in cellular and infection microbiology (28.08.2018)
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Journal Article
Human Papillomavirus DNA Methylation as a Potential Biomarker for Cervical Cancer
CLARKE, Megan A, WENTZENSEN, Nicolas, MIRABELLO, Lisa, GHOSH, Arpita, WACHOLDER, Sholom, HARARI, Ariana, LORINCZ, Attila, SCHIFFMAN, Mark, BURK, Robert D
Published in Cancer epidemiology, biomarkers & prevention (01.12.2012)
Published in Cancer epidemiology, biomarkers & prevention (01.12.2012)
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Journal Article
Microbial co-occurrence complicates associations of gut microbiome with US immigration, dietary intake and obesity
Wang, Zheng, Usyk, Mykhaylo, Vázquez-Baeza, Yoshiki, Chen, Guo-Chong, Isasi, Carmen R, Williams-Nguyen, Jessica S, Hua, Simin, McDonald, Daniel, Thyagarajan, Bharat, Daviglus, Martha L, Cai, Jianwen, North, Kari E, Wang, Tao, Knight, Rob, Burk, Robert D, Kaplan, Robert C, Qi, Qibin
Published in Genome Biology (10.12.2021)
Published in Genome Biology (10.12.2021)
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Journal Article
The cervical microbiome over 7 years and a comparison of methodologies for its characterization
Smith, Benjamin C, McAndrew, Thomas, Chen, Zigui, Harari, Ariana, Barris, David M, Viswanathan, Shankar, Rodriguez, Ana Cecilia, Castle, Phillip, Herrero, Rolando, Schiffman, Mark, Burk, Robert D
Published in PloS one (09.07.2012)
Published in PloS one (09.07.2012)
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Journal Article
Methylation of HPV18, HPV31, and HPV45 Genomes and Cervical Intraepithelial Neoplasia Grade 3
WENTZENSEN, Nicolas, SUN, Chang, CASTLE, Philip E, SCHIFFMAN, Mark, BURK, Robert D, GHOSH, Arpita, KINNEY, Walter, MIRABELLO, Lisa, WACHOLDER, Sholom, SHABER, Ruth, LAMERE, Brandon, CLARKE, Megan, LORINCZ, Attila T
Published in JNCI : Journal of the National Cancer Institute (21.11.2012)
Published in JNCI : Journal of the National Cancer Institute (21.11.2012)
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Journal Article
Risk factors for acquisition and clearance of oral human papillomavirus infection among HIV-infected and HIV-uninfected adults
Beachler, Daniel C, Sugar, Elizabeth A, Margolick, Joseph B, Weber, Kathleen M, Strickler, Howard D, Wiley, Dorothy J, Cranston, Ross D, Burk, Robert D, Minkoff, Howard, Reddy, Susheel, Xiao, Weihong, Guo, Yingshi, Gillison, Maura L, D'Souza, Gypsyamber
Published in American journal of epidemiology (01.01.2015)
Published in American journal of epidemiology (01.01.2015)
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Journal Article
A comparison of clinically utilized human papillomavirus detection methods in head and neck cancer
Schlecht, Nicolas F, Brandwein-Gensler, Margaret, Nuovo, Gerard J, Li, Maomi, Dunne, Anne, Kawachi, Nicole, Smith, Richard V, Burk, Robert D, Prystowsky, Michael B
Published in Modern pathology (01.10.2011)
Published in Modern pathology (01.10.2011)
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Journal Article
The Oral Cavity Contains Abundant Known and Novel Human Papillomaviruses From the Betapapillomavirus and Gammapapillomavirus Genera
Bottalico, Danielle, Chen, Zigui, Dunne, Anne, Ostoloza, Janae, McKinney, Sharod, Sun, Chang, Schlecht, Nicolas F., Fatahzadeh, Mahnaz, Herrero, Rolando, Schiffman, Mark, Burk, Robert D.
Published in The Journal of infectious diseases (01.09.2011)
Published in The Journal of infectious diseases (01.09.2011)
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