Polar and brown bear genomes reveal ancient admixture and demographic footprints of past climate change
Miller, Webb, Schuster, Stephan C., Welch, Andreanna J., Ratan, Aakrosh, Bedoya-Reina, Oscar C., Zhao, Fangqing, Kim, Hie Lim, Burhans, Richard C., Drautz, Daniela I., Wittekindt, Nicola E., Tomsho, Lynn P., Ibarra-Laclette, Enrique, Herrera-Estrella, Luis, Peacock, Elizabeth, Farley, Sean, Sage, George K., Rode, Karyn, Obbard, Martyn, Montiel, Rafael, Bachmann, Lutz, Ingólfsson, Ólafur, Aars, Jon, Mailund, Thomas, Wiig, Øystein, Talbot, Sandra L., Lindqvist, Charlotte
Published in Proceedings of the National Academy of Sciences - PNAS (04.09.2012)
Published in Proceedings of the National Academy of Sciences - PNAS (04.09.2012)
Get full text
Journal Article
Reconstructing contiguous regions of an ancestral genome
Ma, Jian, Zhang, Louxin, Suh, Bernard B, Raney, Brian J, Burhans, Richard C, Kent, W James, Blanchette, Mathieu, Haussler, David, Miller, Webb
Published in Genome Research (01.12.2006)
Published in Genome Research (01.12.2006)
Get full text
Journal Article
Galaxy: a platform for interactive large-scale genome analysis
Giardine, Belinda, Riemer, Cathy, Hardison, Ross C, Burhans, Richard, Elnitski, Laura, Shah, Prachi, Zhang, Yi, Blankenberg, Daniel, Albert, Istvan, Taylor, James, Miller, Webb, Kent, W James, Nekrutenko, Anton
Published in Genome research (01.10.2005)
Published in Genome research (01.10.2005)
Get full text
Journal Article
28-way vertebrate alignment and conservation track in the UCSC Genome Browser
Miller, Webb, Rosenbloom, Kate, Hardison, Ross C, Hou, Minmei, Taylor, James, Raney, Brian, Burhans, Richard, King, David C, Baertsch, Robert, Blankenberg, Daniel, Kosakovsky Pond, Sergei L, Nekrutenko, Anton, Giardine, Belinda, Harris, Robert S, Tyekucheva, Svitlana, Diekhans, Mark, Pringle, Thomas H, Murphy, William J, Lesk, Arthur, Weinstock, George M, Lindblad-Toh, Kerstin, Gibbs, Richard A, Lander, Eric S, Siepel, Adam, Haussler, David, Kent, W James
Published in Genome Research (01.12.2007)
Published in Genome Research (01.12.2007)
Get full text
Journal Article
Genomic Variants Among Threatened Acropora Corals
Kitchen, Sheila A, Ratan, Aakrosh, Bedoya-Reina, Oscar C, Burhans, Richard, Fogarty, Nicole D, Miller, Webb, Baums, Iliana B
Published in G3 : genes - genomes - genetics (01.05.2019)
Published in G3 : genes - genomes - genetics (01.05.2019)
Get full text
Journal Article
Aye-aye population genomic analyses highlight an important center of endemism in northern Madagascar
Perry, George H., Louis, Edward E., Ratan, Aakrosh, Bedoya-Reina, Oscar C., Burhans, Richard C., Lei, Runhua, Johnson, Steig E., Schuster, Stephan C., Miller, Webb
Published in Proceedings of the National Academy of Sciences - PNAS (09.04.2013)
Published in Proceedings of the National Academy of Sciences - PNAS (09.04.2013)
Get full text
Journal Article
Sequencing and analysis of a South Asian-Indian personal genome
Gupta, Ravi, Ratan, Aakrosh, Rajesh, Changanamkandath, Chen, Rong, Kim, Hie Lim, Burhans, Richard, Miller, Webb, Santhosh, Sam, Davuluri, Ramana V, Butte, Atul J, Schuster, Stephan C, Seshagiri, Somasekar, Thomas, George
Published in BMC genomics (31.08.2012)
Published in BMC genomics (31.08.2012)
Get full text
Journal Article
Draft Genome Sequence of the Moderately Thermophilic Bacterium Schleiferia thermophila Strain Yellowstone (Bacteroidetes)
Thiel, Vera, Hamilton, Trinity L, Tomsho, Lynn P, Burhans, Richard, Gay, Scott E, Ramaley, Robert F, Schuster, Stephan C, Steinke, Laurey, Bryant, Donald A
Published in Genome announcements (Washington, DC) (28.08.2014)
Published in Genome announcements (Washington, DC) (28.08.2014)
Get full text
Journal Article
Draft Genome Sequence of Anoxybacillusayderensis Strain MT-Cab (Firmicutes)
Thiel, Vera, Tank, Marcus, Tomsho, Lynn P, Burhans, Richard, Gay, Scott E, Hamilton, Trinity L, Schuster, Stephan C, Bryant, Donald A
Published in Genome announcements (Washington, DC) (29.06.2017)
Published in Genome announcements (Washington, DC) (29.06.2017)
Get full text
Journal Article
Draft Genome Sequence of Anoxybacillus ayderensis Strain MT-Cab ( Firmicutes )
Thiel, Vera, Tank, Marcus, Tomsho, Lynn P, Burhans, Richard, Gay, Scott E, Hamilton, Trinity L, Schuster, Stephan C, Bryant, Donald A
Published in Genome announcements (Washington, DC) (29.06.2017)
Published in Genome announcements (Washington, DC) (29.06.2017)
Get full text
Journal Article
Draft Genome Sequence of a Sulfide-Oxidizing, Autotrophic Filamentous Anoxygenic Phototrophic Bacterium, Chloroflexus sp. Strain MS-G (Chloroflexi)
Thiel, Vera, Hamilton, Trinity L, Tomsho, Lynn P, Burhans, Richard, Gay, Scott E, Schuster, Stephan C, Ward, David M, Bryant, Donald A
Published in Genome announcements (Washington, DC) (04.09.2014)
Published in Genome announcements (Washington, DC) (04.09.2014)
Get full text
Journal Article
Galaxy tools to study genome diversity
Bedoya-Reina, Oscar C, Ratan, Aakrosh, Burhans, Richard, Kim, Hie Lim, Giardine, Belinda, Riemer, Cathy, Li, Qunhua, Olson, Thomas L, Loughran, Jr, Thomas P, Vonholdt, Bridgett M, Perry, George H, Schuster, Stephan C, Miller, Webb
Published in Gigascience (30.12.2013)
Published in Gigascience (30.12.2013)
Get full text
Journal Article
KegAlign: Optimizing pairwise alignments with diagonal partitioning
Gulhan, A Burak, Burhans, Richard, Harris, Robert, Kandemir, Mahmut, Haeussler, Maximilian, Nekrutenko, Anton
Published in bioRxiv (03.09.2024)
Published in bioRxiv (03.09.2024)
Get full text
Journal Article
MultiPipMaker: a comparative alignment server for multiple DNA sequences
Elnitski, Laura, Burhans, Richard, Riemer, Cathy, Hardison, Ross, Miller, Webb
Published in Current protocols in bioinformatics (01.06.2010)
Published in Current protocols in bioinformatics (01.06.2010)
Get more information
Journal Article
MultiPipMaker: comparative alignment server for multiple DNA sequences
Elnitski, Laura, Riemer, Cathy, Burhans, Richard, Hardison, Ross, Miller, Webb
Published in Current protocols in bioinformatics (01.04.2005)
Published in Current protocols in bioinformatics (01.04.2005)
Get more information
Journal Article
Improvements to GALA and dbERG IIE: databases featuring genomic sequence alignment, annotation and experimental results
Elnitski, Laura, Giardine, Belinda, Shah, Prachi, Zhang, Yi, Riemer, Cathy, Weirauch, Matthew, Burhans, Richard, Miller, Webb, Hardison, Ross C
Published in Nucleic acids research (01.01.2005)
Get full text
Published in Nucleic acids research (01.01.2005)
Journal Article
Improvements to GALA and dbERGE II: databases featuring genomic sequence alignment, annotation and experimental results
Elnitski, Laura, Giardine, Belinda, Shah, Prachi, Zhang, Yi, Riemer, Cathy, Weirauch, Matthew, Burhans, Richard, Miller, Webb, Hardison, Ross C.
Published in Nucleic acids research (01.01.2005)
Published in Nucleic acids research (01.01.2005)
Get full text
Journal Article