Illuminating the dark side of the human transcriptome with long read transcript sequencing
Kuo, Richard I, Cheng, Yuanyuan, Zhang, Runxuan, Brown, John W S, Smith, Jacqueline, Archibald, Alan L, Burt, David W
Published in BMC genomics (30.10.2020)
Published in BMC genomics (30.10.2020)
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A high quality Arabidopsis transcriptome for accurate transcript-level analysis of alternative splicing
Zhang, Runxuan, Calixto, Cristiane P G, Marquez, Yamile, Venhuizen, Peter, Tzioutziou, Nikoleta A, Guo, Wenbin, Spensley, Mark, Entizne, Juan Carlos, Lewandowska, Dominika, Ten Have, Sara, Frei Dit Frey, Nicolas, Hirt, Heribert, James, Allan B, Nimmo, Hugh G, Barta, Andrea, Kalyna, Maria, Brown, John W S
Published in Nucleic acids research (19.05.2017)
Published in Nucleic acids research (19.05.2017)
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Alternative splicing and nonsense-mediated decay modulate expression of important regulatory genes in Arabidopsis
Kalyna, Maria, Simpson, Craig G, Syed, Naeem H, Lewandowska, Dominika, Marquez, Yamile, Kusenda, Branislav, Marshall, Jacqueline, Fuller, John, Cardle, Linda, McNicol, Jim, Dinh, Huy Q, Barta, Andrea, Brown, John W S
Published in Nucleic acids research (01.03.2012)
Published in Nucleic acids research (01.03.2012)
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Alternative splicing in plants – coming of age
Syed, Naeem H, Kalyna, Maria, Marquez, Yamile, Barta, Andrea, Brown, John W.S
Published in Trends in plant science (01.10.2012)
Published in Trends in plant science (01.10.2012)
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Transcriptome survey reveals increased complexity of the alternative splicing landscape in Arabidopsis
Marquez, Yamile, Brown, John W S, Simpson, Craig, Barta, Andrea, Kalyna, Maria
Published in Genome research (01.06.2012)
Published in Genome research (01.06.2012)
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A methyl transferase links the circadian clock to the regulation of alternative splicing
Yanovsky, Marcelo J, Sanchez, Sabrina E, Petrillo, Ezequiel, Beckwith, Esteban J, Zhang, Xu, Rugnone, Matias L, Hernando, C. Esteban, Cuevas, Juan C, Godoy Herz, Micaela A, Depetris-Chauvin, Ana, Simpson, Craig G, Brown, John W. S, Cerdán, Pablo D, Borevitz, Justin O, Mas, Paloma, Ceriani, M. Fernanda, Kornblihtt, Alberto R
Published in Nature (London) (04.11.2010)
Published in Nature (London) (04.11.2010)
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Minimalist revision and description of 403 new species in 11 subfamilies of Costa Rican braconid parasitoid wasps, including host records for 219 species
Sharkey, Michael J, Janzen, Daniel H, Hallwachs, Winnie, Chapman, Eric G, Smith, M Alex, Dapkey, Tanya, Brown, Allison, Ratnasingham, Sujeevan, Naik, Suresh, Manjunath, Ramya, Perez, Kate, Milton, Megan, Hebert, Paul, Shaw, Scott R, Kittel, Rebecca N, Solis, M Alma, Metz, Mark A, Goldstein, Paul Z, Brown, John W, Quicke, Donald L J, van Achterberg, C, Brown, Brian V, Burns, John M
Published in ZooKeys (02.02.2021)
Published in ZooKeys (02.02.2021)
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Using DNA barcoding to improve invasive pest identification at U.S. ports-of-entry
Madden, Mary J L, Young, Robert G, Brown, John W, Miller, Scott E, Frewin, Andrew J, Hanner, Robert H
Published in PloS one (17.09.2019)
Published in PloS one (17.09.2019)
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BaRTv1.0: an improved barley reference transcript dataset to determine accurate changes in the barley transcriptome using RNA-seq
Rapazote-Flores, Paulo, Bayer, Micha, Milne, Linda, Mayer, Claus-Dieter, Fuller, John, Guo, Wenbin, Hedley, Pete E, Morris, Jenny, Halpin, Claire, Kam, Jason, McKim, Sarah M, Zwirek, Monika, Casao, M Cristina, Barakate, Abdellah, Schreiber, Miriam, Stephen, Gordon, Zhang, Runxuan, Brown, John W S, Waugh, Robbie, Simpson, Craig G
Published in BMC genomics (11.12.2019)
Published in BMC genomics (11.12.2019)
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Performance of SynerGraft Decellularized Pulmonary Allografts Compared With Standard Cryopreserved Allografts: Results From Multiinstitutional Data
Bibevski, Steve, MD, PhD, Ruzmetov, Mark, MD, PhD, Fortuna, Randall S., MD, Turrentine, Mark W., MD, Brown, John W., MD, Ohye, Richard G., MD
Published in The Annals of thoracic surgery (01.03.2017)
Published in The Annals of thoracic surgery (01.03.2017)
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Alternative Splicing of Barley Clock Genes in Response to Low Temperature
Calixto, Cristiane P G, Simpson, Craig G, Waugh, Robbie, Brown, John W S
Published in PloS one (13.12.2016)
Published in PloS one (13.12.2016)
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Rapid and Dynamic Alternative Splicing Impacts the Arabidopsis Cold Response Transcriptome
Calixto, Cristiane P.G., Guo, Wenbin, James, Allan B., Tzioutziou, Nikoleta A., Entizne, Juan Carlos, Panter, Paige E., Knight, Heather, Nimmo, Hugh G., Zhang, Runxuan, Brown, John W.S.
Published in The Plant cell (01.07.2018)
Published in The Plant cell (01.07.2018)
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spliceosome assembly factor GEMIN2 attenuates the effects of temperature on alternative splicing and circadian rhythms
Schlaen, RubeÌn Gustavo, EstefaneÌiÌa Mancini, Sabrina Elena Sanchez, Soledad Perez-SanteÌiÌaÌngelo, MateÌiÌaÌiÌas L. Rugnone, Craig G. Simpson, John W. S. Brown, Xu Zhang, Ariel Chernomoretz, Marcelo J. Yanovsky
Published in Proceedings of the National Academy of Sciences - PNAS (28.07.2015)
Published in Proceedings of the National Academy of Sciences - PNAS (28.07.2015)
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Cavopulmonary assist for the univentricular Fontan circulation: von Kármán viscous impeller pump
Rodefeld, Mark D., MD, Coats, Brandon, MS, Fisher, Travis, MS, Giridharan, Guruprasad A., PhD, Chen, Jun, PhD, Brown, John W., MD, Frankel, Steven H., PhD
Published in The Journal of thoracic and cardiovascular surgery (01.09.2010)
Published in The Journal of thoracic and cardiovascular surgery (01.09.2010)
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A highly resolved food web for insect seed predators in a species‐rich tropical forest
Gripenberg, Sofia, Basset, Yves, Lewis, Owen T., Terry, J. Christopher D., Wright, S. Joseph, Simón, Indira, Fernández, D. Catalina, Cedeño‐Sanchez, Marjorie, Rivera, Marleny, Barrios, Héctor, Brown, John W., Calderón, Osvaldo, Cognato, Anthony I., Kim, Jorma, Miller, Scott E., Morse, Geoffrey E., Pinzón‐Navarro, Sara, Quicke, Donald L. J., Robbins, Robert K., Salminen, Juha‐Pekka, Vesterinen, Eero, Jordan, Ferenc
Published in Ecology letters (01.10.2019)
Published in Ecology letters (01.10.2019)
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Two Decades Using Stentless Porcine Aortic Root in Right Ventricular Outflow Tract Reconstruction
Kasten, Michael W., Herrmann, Jeremy L., Cox, Morgan, McCurdy, Chelsea, Tragesser, Cody, Turrentine, Mark W., Rodefeld, Mark, Brown, John W.
Published in The Annals of thoracic surgery (01.09.2021)
Published in The Annals of thoracic surgery (01.09.2021)
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A Chloroplast Retrograde Signal Regulates Nuclear Alternative Splicing
Petrillo, Ezequiel, Herz, Micaela A. Godoy, Fuchs, Armin, Reifer, Dominik, Fuller, John, Yanovsky, Marcelo J., Simpson, Craig, Brown, John W. S., Barta, Andrea, Kalyna, Maria, Kornblihtt, Alberto R.
Published in Science (American Association for the Advancement of Science) (25.04.2014)
Published in Science (American Association for the Advancement of Science) (25.04.2014)
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Toward reconstructing the evolution of advanced moths and butterflies (Lepidoptera: Ditrysia): an initial molecular study
Regier, Jerome C, Zwick, Andreas, Cummings, Michael P, Kawahara, Akito Y, Cho, Soowon, Weller, Susan, Roe, Amanda, Baixeras, Joaquin, Brown, John W, Parr, Cynthia, Davis, Donald R, Epstein, Marc, Hallwachs, Winifred, Hausmann, Axel, Janzen, Daniel H, Solis, M. Alma
Published in BMC evolutionary biology (02.12.2009)
Published in BMC evolutionary biology (02.12.2009)
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