Improving breast cancer survival analysis through competition-based multidimensional modeling
Bilal, Erhan, Dutkowski, Janusz, Guinney, Justin, Jang, In Sock, Logsdon, Benjamin A, Pandey, Gaurav, Sauerwine, Benjamin A, Shimoni, Yishai, Moen Vollan, Hans Kristian, Mecham, Brigham H, Rueda, Oscar M, Tost, Jorg, Curtis, Christina, Alvarez, Mariano J, Kristensen, Vessela N, Aparicio, Samuel, Børresen-Dale, Anne-Lise, Caldas, Carlos, Califano, Andrea, Friend, Stephen H, Ideker, Trey, Schadt, Eric E, Stolovitzky, Gustavo A, Margolin, Adam A
Published in PLoS computational biology (01.05.2013)
Published in PLoS computational biology (01.05.2013)
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A statin-dependent QTL for GATM expression is associated with statin-induced myopathy
Mangravite, Lara M., Engelhardt, Barbara E., Medina, Marisa W., Smith, Joshua D., Brown, Christopher D., Chasman, Daniel I., Mecham, Brigham H., Howie, Bryan, Shim, Heejung, Naidoo, Devesh, Feng, QiPing, Rieder, Mark J., Chen, Yii.-Der I., Rotter, Jerome I., Ridker, Paul M., Hopewell, Jemma C., Parish, Sarah, Armitage, Jane, Collins, Rory, Wilke, Russell A., Nickerson, Deborah A., Stephens, Matthew, Krauss, Ronald M.
Published in Nature (London) (17.10.2013)
Published in Nature (London) (17.10.2013)
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Journal Article
Systematic analysis of challenge-driven improvements in molecular prognostic models for breast cancer
Margolin, Adam A, Bilal, Erhan, Huang, Erich, Norman, Thea C, Ottestad, Lars, Mecham, Brigham H, Sauerwine, Ben, Kellen, Michael R, Mangravite, Lara M, Furia, Matthew D, Vollan, Hans Kristian Moen, Rueda, Oscar M, Guinney, Justin, Deflaux, Nicole A, Hoff, Bruce, Schildwachter, Xavier, Russnes, Hege G, Park, Daehoon, Vang, Veronica O, Pirtle, Tyler, Youseff, Lamia, Citro, Craig, Curtis, Christina, Kristensen, Vessela N, Hellerstein, Joseph, Friend, Stephen H, Stolovitzky, Gustavo, Aparicio, Samuel, Caldas, Carlos, Børresen-Dale, Anne-Lise
Published in Science translational medicine (17.04.2013)
Published in Science translational medicine (17.04.2013)
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Pharmacological Silencing of MicroRNA-152 Prevents Pressure Overload-Induced Heart Failure
LaRocca, Thomas J, Seeger, Timon, Prado, Maricela, Perea-Gil, Isaac, Neofytou, Evgenios, Mecham, Brigham H, Ameen, Mohamed, Chang, Alex Chia Yu, Pandey, Gaurav, Wu, Joseph C, Karakikes, Ioannis
Published in Circulation. Heart failure (01.03.2020)
Published in Circulation. Heart failure (01.03.2020)
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Journal Article
Histone Deacetylase Inhibition Elicits an Evolutionarily Conserved Self-Renewal Program in Embryonic Stem Cells
Ware, Carol B., Wang, Linlin, Mecham, Brigham H., Shen, Lanlan, Nelson, Angelique M., Bar, Merav, Lamba, Deepak A., Dauphin, Derek S., Buckingham, Brian, Askari, Bardia, Lim, Raymond, Tewari, Muneesh, Gartler, Stanley M., Issa, Jean-Pierre, Pavlidis, Paul, Duan, Zhijun, Blau, C. Anthony
Published in Cell stem cell (03.04.2009)
Published in Cell stem cell (03.04.2009)
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Journal Article
Osteoblast differentiation profiles define sex specific gene expression patterns in craniosynostosis
Park, Sarah S, Beyer, Richard P, Smyth, Matthew D, Clarke, Christine M, Timms, Andrew E, Bammler, Theo K, Stamper, Brendan D, Mecham, Brigham H, Gustafson, Jennifer A, Cunningham, Michael L
Published in Bone (New York, N.Y.) (01.07.2015)
Published in Bone (New York, N.Y.) (01.07.2015)
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Journal Article
Individual Matrix Metalloproteinases Control Distinct Transcriptional Responses in Airway Epithelial Cells Infected with Pseudomonas aeruginosa
Kassim, Sean Y, Gharib, Sina A, Mecham, Brigham H, Birkland, Timothy P, Parks, William C, McGuire, John K
Published in Infection and Immunity (01.12.2007)
Published in Infection and Immunity (01.12.2007)
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Journal Article
Redefinition of Affymetrix probe sets by sequence overlap with cDNA microarray probes reduces cross-platform inconsistencies in cancer-associated gene expression measurements
Carter, Scott L, Eklund, Aron C, Mecham, Brigham H, Kohane, Isaac S, Szallasi, Zoltan
Published in BMC bioinformatics (25.04.2005)
Published in BMC bioinformatics (25.04.2005)
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Transcriptional analysis of human cranial compartments with different embryonic origins
Homayounfar, Negar, Park, Sarah S, Afsharinejad, Zahra, Bammler, Theodor K, MacDonald, James W, Farin, Federico M, Mecham, Brigham H, Cunningham, Michael L
Published in Archives of oral biology (01.09.2015)
Published in Archives of oral biology (01.09.2015)
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Journal Article
Induction of the Plasminogen Activator System by Mechanical Stimulation of Human Bronchial Epithelial Cells
Chu, Eric K, Cheng, Jason, Foley, John S, Mecham, Brigham H, Owen, Caroline A, Haley, Kathleen J, Mariani, Thomas J, Kohane, Isaac S, Tschumperlin, Daniel J, Drazen, Jeffrey M
Published in American journal of respiratory cell and molecular biology (01.12.2006)
Published in American journal of respiratory cell and molecular biology (01.12.2006)
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Expression Profiles of the Mouse Lung Identify a Molecular Signature of Time-to-Birth
Kho, Alvin T, Bhattacharya, Soumyaroop, Mecham, Brigham H, Hong, Jungha, Kohane, Isaac S, Mariani, Thomas J
Published in American journal of respiratory cell and molecular biology (01.01.2009)
Published in American journal of respiratory cell and molecular biology (01.01.2009)
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Journal Article
Sequence‐matched probes produce increased cross‐platform consistency and more reproducible biological results in microarray‐based gene expression measurements
Mecham, Brigham H., Klus, Gregory T., Strovel, Jeffrey, Augustus, Meena, Byrne, David, Bozso, Peter, Wetmore, Daniel Z., Mariani, Thomas J., Kohane, Isaac S., Szallasi, Zoltan
Published in Nucleic acids research (2004)
Published in Nucleic acids research (2004)
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Journal Article
The SERPINE2 Gene Is Associated with Chronic Obstructive Pulmonary Disease
DeMeo, Dawn L., Mariani, Thomas J., Lange, Christoph, Srisuma, Sorachai, Litonjua, Augusto A., Celedón, Juan C., Lake, Stephen L., Reilly, John J., Chapman, Harold A., Mecham, Brigham H., Haley, Kathleen J., Sylvia, Jody S., Sparrow, David, Spira, Avrum E., Beane, Jennifer, Pinto-Plata, Victor, Speizer, Frank E., Shapiro, Steven D., Weiss, Scott T., Silverman, Edwin K.
Published in American journal of human genetics (01.02.2006)
Published in American journal of human genetics (01.02.2006)
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Journal Article
A Distributed Network for Intensive Longitudinal Monitoring in Metastatic Triple-Negative Breast Cancer
Blau, C Anthony, Ramirez, Arturo B, Blau, Sibel, Pritchard, Colin C, Dorschner, Michael O, Schmechel, Stephen C, Martins, Timothy J, Mahen, Elisabeth M, Burton, Kimberly A, Komashko, Vitalina M, Radenbaugh, Amie J, Dougherty, Katy, Thomas, Anju, Miller, Christopher P, Annis, James, Fromm, Jonathan R, Song, Chaozhong, Chang, Elizabeth, Howard, Kellie, Austin, Sharon, Schmidt, Rodney A, Linenberger, Michael L, Becker, Pamela S, Senecal, Francis M, Mecham, Brigham H, Lee, Su-In, Madan, Anup, Ronen, Roy, Dutkowski, Janusz, Heimfeld, Shelly, Wood, Brent L, Stilwell, Jackie L, Kaldjian, Eric P, Haussler, David, Zhu, Jingchun
Published in Journal of the National Comprehensive Cancer Network (01.01.2016)
Published in Journal of the National Comprehensive Cancer Network (01.01.2016)
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Safety, Feasibility, and Merits of Longitudinal Molecular Testing of Multiple Metastatic Sites to Inform mTNBC Patient Treatment in the Intensive Trial of Omics in Cancer
Burton, Kimberly A, Mahen, Elisabeth, Konnick, Eric Quentin, Blau, Sibel, Dorschner, Michael O, Ramirez, Arturo B, Schmechel, Stephen C, Song, Chaozhong, Parulkar, Rahul, Parker, Stephanie, Senecal, Francis Mark, Pritchard, Colin C, Mecham, Brigham H, Szeto, Christopher, Spilman, Patricia, Zhu, Jingchun, Gadi, Vijayakrishna K, Ronen, Roy, Stilwell, Jackie, Kaldjian, Eric, Dutkowski, Janusz, Benz, Stephen Charles, Rabizadeh, Shahrooz, Soon-Shiong, Patrick, Blau, C Anthony
Published in JCO precision oncology (01.03.2022)
Published in JCO precision oncology (01.03.2022)
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