Preparation of cfMeDIP-seq libraries for methylome profiling of plasma cell-free DNA
Shen, Shu Yi, Burgener, Justin M, Bratman, Scott V, De Carvalho, Daniel D
Published in Nature protocols (01.10.2019)
Published in Nature protocols (01.10.2019)
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Journal Article
Circulating tumor DNA and liquid biopsy in oncology
Cescon, David W, Bratman, Scott V, Chan, Steven M, Siu, Lillian L
Published in Nature cancer (01.03.2020)
Published in Nature cancer (01.03.2020)
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Journal Article
The prognostic landscape of genes and infiltrating immune cells across human cancers
Gentles, Andrew J, Newman, Aaron M, Liu, Chih Long, Bratman, Scott V, Feng, Weiguo, Kim, Dongkyoon, Nair, Viswam S, Xu, Yue, Khuong, Amanda, Hoang, Chuong D, Diehn, Maximilian, West, Robert B, Plevritis, Sylvia K, Alizadeh, Ash A
Published in Nature medicine (01.08.2015)
Published in Nature medicine (01.08.2015)
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Journal Article
Senescence, Necrosis, and Apoptosis Govern Circulating Cell-free DNA Release Kinetics
Rostami, Ariana, Lambie, Meghan, Yu, Caberry W., Stambolic, Vuk, Waldron, John N., Bratman, Scott V.
Published in Cell reports (Cambridge) (30.06.2020)
Published in Cell reports (Cambridge) (30.06.2020)
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Journal Article
Nasopharyngeal Cancer: Molecular Landscape
Bruce, Jeff P, Yip, Kenneth, Bratman, Scott V, Ito, Emma, Liu, Fei-Fei
Published in Journal of clinical oncology (10.10.2015)
Published in Journal of clinical oncology (10.10.2015)
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Journal Article
Isolation of salivary cell-free DNA for cancer detection
Brooks, Patricia J, Malkin, Ethan Z, De Michino, Steven, Bratman, Scott V
Published in PloS one (02.05.2023)
Published in PloS one (02.05.2023)
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Journal Article
Plasma redox imbalance caused by albumin oxidation promotes lung-predominant NETosis and pulmonary cancer metastasis
Inoue, Minoru, Nakashima, Ryota, Enomoto, Masahiro, Koike, Yuhki, Zhao, Xiao, Yip, Kenneth, Huang, Shao Hui, Waldron, John N, Ikura, Mitsuhiko, Liu, Fei-Fei, Bratman, Scott V
Published in Nature communications (30.11.2018)
Published in Nature communications (30.11.2018)
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Journal Article
Noninvasive monitoring of diffuse large B-cell lymphoma by immunoglobulin high-throughput sequencing
Kurtz, David M., Green, Michael R., Bratman, Scott V., Scherer, Florian, Liu, Chih Long, Kunder, Christian A., Takahashi, Kazuhiro, Glover, Cynthia, Keane, Colm, Kihira, Shingo, Visser, Brendan, Callahan, Jason, Kong, Katherine A., Faham, Malek, Corbelli, Karen S., Miklos, David, Advani, Ranjana H., Levy, Ronald, Hicks, Rodney J., Hertzberg, Mark, Ohgami, Robert S., Gandhi, Maher K., Diehn, Maximilian, Alizadeh, Ash A.
Published in Blood (11.06.2015)
Published in Blood (11.06.2015)
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Journal Article
Human papillomavirus integration transforms chromatin to drive oncogenesis
Karimzadeh, Mehran, Arlidge, Christopher, Rostami, Ariana, Lupien, Mathieu, Bratman, Scott V, Hoffman, Michael M
Published in Genome Biology (27.06.2023)
Published in Genome Biology (27.06.2023)
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Journal Article
Circulating tumour DNA sequence analysis as an alternative to multiple myeloma bone marrow aspirates
Kis, Olena, Kaedbey, Rayan, Chow, Signy, Danesh, Arnavaz, Dowar, Mark, Li, Tiantian, Li, Zhihua, Liu, Jessica, Mansour, Mark, Masih-Khan, Esther, Zhang, Tong, Bratman, Scott V, Oza, Amit M, Kamel-Reid, Suzanne, Trudel, Suzanne, Pugh, Trevor J
Published in Nature communications (11.05.2017)
Published in Nature communications (11.05.2017)
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Journal Article
Tumor-Naïve Multimodal Profiling of Circulating Tumor DNA in Head and Neck Squamous Cell Carcinoma
Burgener, Justin M, Zou, Jinfeng, Zhao, Zhen, Zheng, Yangqiao, Shen, Shu Yi, Huang, Shao Hui, Keshavarzi, Sareh, Xu, Wei, Liu, Fei-Fei, Liu, Geoffrey, Waldron, John N, Weinreb, Ilan, Spreafico, Anna, Siu, Lillian L, de Almeida, John R, Goldstein, David P, Hoffman, Michael M, De Carvalho, Daniel D, Bratman, Scott V
Published in Clinical cancer research (01.08.2021)
Published in Clinical cancer research (01.08.2021)
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Journal Article
Pan-cancer analysis of longitudinal metastatic tumors reveals genomic alterations and immune landscape dynamics associated with pembrolizumab sensitivity
Cindy Yang, S Y, Lien, Scott C, Wang, Ben X, Clouthier, Derek L, Hanna, Youstina, Cirlan, Iulia, Zhu, Kelsey, Bruce, Jeffrey P, El Ghamrasni, Samah, Iafolla, Marco A J, Oliva, Marc, Hansen, Aaron R, Spreafico, Anna, Bedard, Philippe L, Lheureux, Stephanie, Razak, Albiruni, Speers, Vanessa, Berman, Hal K, Aleshin, Alexey, Haibe-Kains, Benjamin, Brooks, David G, McGaha, Tracy L, Butler, Marcus O, Bratman, Scott V, Ohashi, Pamela S, Siu, Lillian L, Pugh, Trevor J
Published in Nature communications (26.08.2021)
Published in Nature communications (26.08.2021)
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Journal Article
Circulating tumour DNA kinetics in recurrent/metastatic head and neck squamous cell cancer patients
Taylor, Kirsty, Zou, Jinfeng, Magalhaes, Marcos, Oliva, Marc, Spreafico, Anna, Hansen, Aaron R., McDade, Simon S., Coyle, Vicky M., Lawler, Mark, Elimova, Elena, Bratman, Scott V., Siu, Lillian L.
Published in European journal of cancer (1990) (01.07.2023)
Published in European journal of cancer (1990) (01.07.2023)
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Journal Article
Permanent Helical Undulators with Strong Fields
Bamberg, E., Magory, E., Balal, N., Bratman, V.L.
Published in Journal of physics. Conference series (01.01.2024)
Published in Journal of physics. Conference series (01.01.2024)
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Journal Article
Clinical Utility of Epstein-Barr Virus DNA Testing in the Treatment of Nasopharyngeal Carcinoma Patients
Kim, Kelly Y., Le, Quynh-Thu, Yom, Sue S., Ng, Raymond H.W., Chan, K.C. Allen, Bratman, Scott V., Welch, John J., Divi, Rao L., Petryshyn, Raymond A., Conley, Barbara A.
Published in International journal of radiation oncology, biology, physics (01.08.2017)
Published in International journal of radiation oncology, biology, physics (01.08.2017)
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Journal Article
Metabolic regulation of dermal fibroblasts contributes to skin extracellular matrix homeostasis and fibrosis
Zhao, Xiao, Psarianos, Pamela, Ghoraie, Laleh Soltan, Yip, Kenneth, Goldstein, David, Gilbert, Ralph, Witterick, Ian, Pang, Hilary, Hussain, Ali, Lee, Ju Hee, Williams, Justin, Bratman, Scott V, Ailles, Laurie, Haibe-Kains, Benjamin, Liu, Fei-Fei
Published in Nature metabolism (01.01.2019)
Published in Nature metabolism (01.01.2019)
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Journal Article
The cell-free DNA methylome captures distinctions between localized and metastatic prostate tumors
Chen, Sujun, Petricca, Jessica, Ye, Wenbin, Guan, Jiansheng, Zeng, Yong, Cheng, Nicholas, Gong, Linsey, Shen, Shu Yi, Hua, Junjie T, Crumbaker, Megan, Fraser, Michael, Liu, Stanley, Bratman, Scott V, van der Kwast, Theodorus, Pugh, Trevor, Joshua, Anthony M, De Carvalho, Daniel D, Chi, Kim N, Awadalla, Philip, Ji, Guoli, Feng, Felix, Wyatt, Alexander W, He, Housheng Hansen
Published in Nature communications (29.10.2022)
Published in Nature communications (29.10.2022)
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