A survey of the complex transcriptome from the highly polyploid sugarcane genome using full-length isoform sequencing and de novo assembly from short read sequencing
Hoang, Nam V, Furtado, Agnelo, Mason, Patrick J, Marquardt, Annelie, Kasirajan, Lakshmi, Thirugnanasambandam, Prathima P, Botha, Frederik C, Henry, Robert J
Published in BMC genomics (22.05.2017)
Published in BMC genomics (22.05.2017)
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Analysis of the diversity and tissue specificity of sucrose synthase genes in the long read transcriptome of sugarcane
Thirugnanasambandam, Prathima P, Mason, Patrick J, Hoang, Nam V, Furtado, Agnelo, Botha, Frederik C, Henry, Robert J
Published in BMC plant biology (25.04.2019)
Published in BMC plant biology (25.04.2019)
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Journal Article
Association of gene expression with biomass content and composition in sugarcane
Hoang, Nam V, Furtado, Agnelo, O'Keeffe, Angela J, Botha, Frederik C, Henry, Robert J
Published in PloS one (17.08.2017)
Published in PloS one (17.08.2017)
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Journal Article
Transcriptome and metabolome integration in sugarcane through culm development
Perlo, Virginie, Furtado, Agnelo, Botha, Frederik C., Margarido, Gabriel R. A., Hodgson‐Kratky, Katrina, Choudhary, Hemant, Gladden, John, Simmons, Blake, Henry, Robert J.
Published in Food and energy security (01.11.2022)
Published in Food and energy security (01.11.2022)
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Journal Article
The Impact of cDNA Normalization on Long-Read Sequencing of a Complex Transcriptome
Hoang, Nam V, Furtado, Agnelo, Perlo, Virginie, Botha, Frederik C, Henry, Robert J
Published in Frontiers in genetics (23.07.2019)
Published in Frontiers in genetics (23.07.2019)
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Journal Article
Downregulation of pyrophosphate: d-fructose-6-phosphate 1-phosphotransferase activity in sugarcane culms enhances sucrose accumulation due to elevated hexose-phosphate levels
van der Merwe, Margaretha J, Groenewald, Jan-Hendrik, Stitt, Mark, Kossmann, Jens, Botha, Frederik C
Published in Planta (01.02.2010)
Published in Planta (01.02.2010)
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Kinetic model of sucrose accumulation in maturing sugarcane culm tissue
Uys, Lafras, Botha, Frederik C., Hofmeyr, Jan-Hendrik S., Rohwer, Johann M.
Published in Phytochemistry (Oxford) (01.08.2007)
Published in Phytochemistry (Oxford) (01.08.2007)
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Field study reveals core plant microbiota and relative importance of their drivers
Hamonts, Kelly, Trivedi, Pankaj, Garg, Anshu, Janitz, Caroline, Grinyer, Jasmine, Holford, Paul, Botha, Frederik C., Anderson, Ian C., Singh, Brajesh K.
Published in Environmental microbiology (01.01.2018)
Published in Environmental microbiology (01.01.2018)
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De novo assembly and characterizing of the culm-derived meta-transcriptome from the polyploid sugarcane genome based on coding transcripts
Hoang, Nam V., Furtado, Agnelo, Thirugnanasambandam, Prathima P., Botha, Frederik C., Henry, Robert J.
Published in Heliyon (01.03.2018)
Published in Heliyon (01.03.2018)
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Transcriptome analysis highlights key differentially expressed genes involved in cellulose and lignin biosynthesis of sugarcane genotypes varying in fiber content
Kasirajan, Lakshmi, Hoang, Nam V, Furtado, Agnelo, Botha, Frederik C, Henry, Robert J
Published in Scientific reports (02.08.2018)
Published in Scientific reports (02.08.2018)
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Journal Article
Limited allele-specific gene expression in highly polyploid sugarcane
Margarido, Gabriel Rodrigues Alves, Correr, Fernando Henrique, Furtado, Agnelo, Botha, Frederik C, Henry, Robert James
Published in Genome research (01.02.2022)
Published in Genome research (01.02.2022)
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Journal Article
Purification and kinetic properties of UDP-glucose dehydrogenase from sugarcane
Turner, William, Botha, Frederik C
Published in Archives of biochemistry and biophysics (15.11.2002)
Published in Archives of biochemistry and biophysics (15.11.2002)
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Journal Article
Variation in sugarcane biomass composition and enzymatic saccharification of leaves, internodes and roots
Mason, Patrick J, Furtado, Agnelo, Marquardt, Annelie, Hodgson-Kratky, Katrina, Hoang, Nam V, Botha, Frederik C, Papa, Gabriella, Mortimer, Jenny C, Simmons, Blake, Henry, Robert J
Published in Biotechnology for biofuels (09.12.2020)
Published in Biotechnology for biofuels (09.12.2020)
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Journal Article
Transcriptome changes in the developing sugarcane culm associated with high yield and early-season high sugar content
Perlo, Virginie, Margarido, Gabriel R. A., Botha, Frederik C., Furtado, Agnelo, Hodgson-Kratky, Katrina, Correr, Fernando H., Henry, Robert J.
Published in Theoretical and applied genetics (01.05.2022)
Published in Theoretical and applied genetics (01.05.2022)
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