Identification of Genetically Intact HIV-1 Proviruses in Specific CD4+ T Cells from Effectively Treated Participants
Hiener, Bonnie, Horsburgh, Bethany A., Eden, John-Sebastian, Barton, Kirston, Schlub, Timothy E., Lee, Eunok, von Stockenstrom, Susanne, Odevall, Lina, Milush, Jeffrey M., Liegler, Teri, Sinclair, Elizabeth, Hoh, Rebecca, Boritz, Eli A., Douek, Daniel, Fromentin, Rémi, Chomont, Nicolas, Deeks, Steven G., Hecht, Frederick M., Palmer, Sarah
Published in Cell reports (Cambridge) (17.10.2017)
Published in Cell reports (Cambridge) (17.10.2017)
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Identification of astrocyte regulators by nucleic acid cytometry
Clark, Iain C, Wheeler, Michael A, Lee, Hong-Gyun, Li, Zhaorong, Sanmarco, Liliana M, Thaploo, Shravan, Polonio, Carolina M, Shin, Seung Won, Scalisi, Giulia, Henry, Amy R, Rone, Joseph M, Giovannoni, Federico, Charabati, Marc, Akl, Camilo Faust, Aleman, Dulce M, Zandee, Stephanie E J, Prat, Alexandre, Douek, Daniel C, Boritz, Eli A, Quintana, Francisco J, Abate, Adam R
Published in Nature (London) (09.02.2023)
Published in Nature (London) (09.02.2023)
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Multiple Origins of Virus Persistence during Natural Control of HIV Infection
Boritz, Eli A., Darko, Samuel, Swaszek, Luke, Wolf, Gideon, Wells, David, Wu, Xiaolin, Henry, Amy R., Laboune, Farida, Hu, Jianfei, Ambrozak, David, Hughes, Marybeth S., Hoh, Rebecca, Casazza, Joseph P., Vostal, Alexander, Bunis, Daniel, Nganou-Makamdop, Krystelle, Lee, James S., Migueles, Stephen A., Koup, Richard A., Connors, Mark, Moir, Susan, Schacker, Timothy, Maldarelli, Frank, Hughes, Stephen H., Deeks, Steven G., Douek, Daniel C.
Published in Cell (11.08.2016)
Published in Cell (11.08.2016)
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Fc-mediated effector function contributes to the in vivo antiviral effect of an HIV neutralizing antibody
Asokan, Mangaiarkarasi, Dias, Joana, Liu, Cuiping, Maximova, Anna, Ernste, Keenan, Pegu, Amarendra, McKee, Krisha, Shi, Wei, Chen, Xuejun, Almasri, Cassandra, Promsote, Wanwisa, Ambrozak, David R., Gama, Lucio, Hu, Jianfei, Douek, Daniel C., Todd, John-Paul, Lifson, Jeffrey D., Fourati, Slim, Sekaly, Rafick P., Crowley, Andrew R., Ackerman, Margaret E., Ko, Sung Hee, Kilam, Divya, Boritz, Eli A., Liao, Laura E., Best, Katharine, Perelson, Alan S., Mascola, John R., Koup, Richard A.
Published in Proceedings of the National Academy of Sciences - PNAS (04.08.2020)
Published in Proceedings of the National Academy of Sciences - PNAS (04.08.2020)
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High-throughput, single-copy sequencing reveals SARS-CoV-2 spike variants coincident with mounting humoral immunity during acute COVID-19
Ko, Sung Hee, Bayat Mokhtari, Elham, Mudvari, Prakriti, Stein, Sydney, Stringham, Christopher D, Wagner, Danielle, Ramelli, Sabrina, Ramos-Benitez, Marcos J, Strich, Jeffrey R, Davey, Jr, Richard T, Zhou, Tongqing, Misasi, John, Kwong, Peter D, Chertow, Daniel S, Sullivan, Nancy J, Boritz, Eli A
Published in PLoS pathogens (08.04.2021)
Published in PLoS pathogens (08.04.2021)
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The role of CD101-expressing CD4 T cells in HIV/SIV pathogenesis and persistence
Strongin, Zachary, Hoang, Timothy N, Tharp, Gregory K, Rahmberg, Andrew R, Harper, Justin L, Nguyen, Kevin, Franchitti, Lavinia, Cervasi, Barbara, Lee, Max, Zhang, Zhan, Boritz, Eli A, Silvestri, Guido, Marconi, Vincent C, Bosinger, Steven E, Brenchley, Jason M, Kulpa, Deanna A, Paiardini, Mirko
Published in PLoS pathogens (01.07.2022)
Published in PLoS pathogens (01.07.2022)
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AP-1/c-Fos supports SIV and HIV-1 latency in CD4 T cells infected in vivo
Cobos Jiménez, Viviana, Geretz, Aviva, Tokarev, Andrey, Ehrenberg, Philip K., Deletsu, Selase, Machmach, Kawthar, Mudvari, Prakriti, Howard, J. Natalie, Zelkoski, Amanda, Paquin-Proulx, Dominic, Del Prete, Gregory Q., Subra, Caroline, Boritz, Eli A., Bosque, Alberto, Thomas, Rasmi, Bolton, Diane L.
Published in iScience (20.10.2023)
Published in iScience (20.10.2023)
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HIV silencing and cell survival signatures in infected T cell reservoirs
Clark, Iain C, Mudvari, Prakriti, Thaploo, Shravan, Smith, Samuel, Abu-Laban, Mohammad, Hamouda, Mehdi, Theberge, Marc, Shah, Sakshi, Ko, Sung Hee, Pérez, Liliana, Bunis, Daniel G, Lee, James S, Kilam, Divya, Zakaria, Saami, Choi, Sally, Darko, Samuel, Henry, Amy R, Wheeler, Michael A, Hoh, Rebecca, Butrus, Salwan, Deeks, Steven G, Quintana, Francisco J, Douek, Daniel C, Abate, Adam R, Boritz, Eli A
Published in Nature (London) (09.02.2023)
Published in Nature (London) (09.02.2023)
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FIND-seq: high-throughput nucleic acid cytometry for rare single-cell transcriptomics
Shin, Seung Won, Mudvari, Prakriti, Thaploo, Shravan, Wheeler, Michael A., Douek, Daniel C., Quintana, Francisco J., Boritz, Eli A., Abate, Adam R., Clark, Iain C.
Published in Nature protocols (22.07.2024)
Published in Nature protocols (22.07.2024)
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Conflicting evidence for HIV enrichment in CD32 + CD4 T cells
Pérez, Liliana, Anderson, Jodi, Chipman, Jeffrey, Thorkelson, Ann, Chun, Tae-Wook, Moir, Susan, Haase, Ashley T, Douek, Daniel C, Schacker, Timothy W, Boritz, Eli A
Published in Nature (London) (01.09.2018)
Published in Nature (London) (01.09.2018)
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Rapid intra-host diversification and evolution of SARS-CoV-2 in advanced HIV infection
Ko, Sung Hee, Radecki, Pierce, Belinky, Frida, Bhiman, Jinal N, Meiring, Susan, Kleynhans, Jackie, Amoako, Daniel, Guerra Canedo, Vanessa, Lucas, Margaret, Kekana, Dikeledi, Martinson, Neil, Lebina, Limakatso, Everatt, Josie, Tempia, Stefano, Bylund, Tatsiana, Rawi, Reda, Kwong, Peter D, Wolter, Nicole, von Gottberg, Anne, Cohen, Cheryl, Boritz, Eli A
Published in Nature communications (22.08.2024)
Published in Nature communications (22.08.2024)
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High levels of genetically intact HIV in HLA-DR+ memory T cells indicates their value for reservoir studies
Horsburgh, Bethany A, Lee, Eunok, Hiener, Bonnie, Eden, John-Sebastian, Schlub, Timothy E, von Stockenstrom, Susanne, Odevall, Lina, Milush, Jeffrey M, Liegler, Teri, Sinclair, Elizabeth, Hoh, Rebecca, Boritz, Eli A, Douek, Daniel C, Fromentin, Remi, Chomont, Nicolas, Deeks, Steven G, Hecht, Frederick M, Palmer, Sarah
Published in AIDS (London) (01.04.2020)
Published in AIDS (London) (01.04.2020)
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Droplet-microfluidics-assisted sequencing of HIV proviruses and their integration sites in cells from people on antiretroviral therapy
Sun, Chen, Liu, Leqian, Pérez, Liliana, Li, Xiangpeng, Liu, Yifan, Xu, Peng, Boritz, Eli A, Mullins, James I, Abate, Adam R
Published in Nature biomedical engineering (01.08.2022)
Published in Nature biomedical engineering (01.08.2022)
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VRC34-Antibody Lineage Development Reveals How a Required Rare Mutation Shapes the Maturation of a Broad HIV-Neutralizing Lineage
Shen, Chen-Hsiang, DeKosky, Brandon J., Guo, Yicheng, Xu, Kai, Gu, Ying, Kilam, Divya, Ko, Sung Hee, Kong, Rui, Liu, Kevin, Louder, Mark K., Ou, Li, Zhang, Baoshan, Chao, Cara W., Corcoran, Martin M., Feng, Eric, Huang, Jesse, Normandin, Erica, O’Dell, Sijy, Ransier, Amy, Rawi, Reda, Sastry, Mallika, Schmidt, Stephen D., Wang, Shuishu, Wang, Yiran, Chuang, Gwo-Yu, Doria-Rose, Nicole A., Lin, Bob, Zhou, Tongqing, Boritz, Eli A., Connors, Mark, Douek, Daniel C., Karlsson Hedestam, Gunilla B., Sheng, Zizhang, Shapiro, Lawrence, Mascola, John R., Kwong, Peter D.
Published in Cell host & microbe (08.04.2020)
Published in Cell host & microbe (08.04.2020)
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High-Throughput, Single-Copy Sequencing Reveals SARS-CoV-2 Spike Variants Coincident with Mounting Humoral Immunity during Acute COVID-19
Ko, Sung Hee, Mokhtari, Elham Bayat, Mudvari, Prakriti, Stein, Sydney, Stringham, Christopher D, Wagner, Danielle, Ramelli, Sabrina, Ramos-Benitez, Marcos J, Strich, Jeffrey R, Davey, Jr, Richard T, Zhou, Tongqing, Misasi, John, Kwong, Peter D, Chertow, Daniel S, Sullivan, Nancy J, Boritz, Eli A
Published in bioRxiv (22.02.2021)
Published in bioRxiv (22.02.2021)
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Protection from SARS-CoV-2 Delta one year after mRNA-1273 vaccination in rhesus macaques coincides with anamnestic antibody response in the lung
Gagne, Matthew, Corbett, Kizzmekia S., Flynn, Barbara J., Foulds, Kathryn E., Wagner, Danielle A., Andrew, Shayne F., Todd, John-Paul M., Honeycutt, Christopher Cole, McCormick, Lauren, Nurmukhambetova, Saule T., Davis-Gardner, Meredith E., Pessaint, Laurent, Bock, Kevin W., Nagata, Bianca M., Minai, Mahnaz, Werner, Anne P., Moliva, Juan I., Tucker, Courtney, Lorang, Cynthia G., Zhao, Bingchun, McCarthy, Elizabeth, Cook, Anthony, Dodson, Alan, Teng, I-Ting, Mudvari, Prakriti, Roberts-Torres, Jesmine, Laboune, Farida, Wang, Lingshu, Goode, Adrienne, Kar, Swagata, Boyoglu-Barnum, Seyhan, Yang, Eun Sung, Shi, Wei, Ploquin, Aurélie, Doria-Rose, Nicole, Carfi, Andrea, Mascola, John R., Boritz, Eli A., Edwards, Darin K., Andersen, Hanne, Lewis, Mark G., Suthar, Mehul S., Graham, Barney S., Roederer, Mario, Moore, Ian N., Nason, Martha C., Sullivan, Nancy J., Douek, Daniel C., Seder, Robert A.
Published in Cell (06.01.2022)
Published in Cell (06.01.2022)
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Safety and tolerability of AAV8 delivery of a broadly neutralizing antibody in adults living with HIV: a phase 1, dose-escalation trial
Casazza, Joseph P, Cale, Evan M, Narpala, Sandeep, Yamshchikov, Galina V, Coates, Emily E, Hendel, Cynthia S, Novik, Laura, Holman, LaSonji A, Widge, Alicia T, Apte, Preeti, Gordon, Ingelise, Gaudinski, Martin R, Conan-Cibotti, Michelle, Lin, Bob C, Nason, Martha C, Trofymenko, Olga, Telscher, Shinyi, Plummer, Sarah H, Wycuff, Diane, Adams, William C, Pandey, Janardan P, McDermott, Adrian, Roederer, Mario, Sukienik, Avery N, O'Dell, Sijy, Gall, Jason G, Flach, Britta, Terry, Travis L, Choe, Misook, Shi, Wei, Chen, Xuejun, Kaltovich, Florence, Saunders, Kevin O, Stein, Judy A, Doria-Rose, Nicole A, Schwartz, Richard M, Balazs, Alejandro B, Baltimore, David, Nabel, Gary J, Koup, Richard A, Graham, Barney S, Ledgerwood, Julie E, Mascola, John R
Published in Nature medicine (01.05.2022)
Published in Nature medicine (01.05.2022)
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Conflicting evidence for HIV enrichment in CD32+ CD4 T cells
Pérez, Liliana, Anderson, Jodi, Chipman, Jeffrey, Thorkelson, Ann, Chun, Tae-Wook, Moir, Susan, Haase, Ashley T, Douek, Daniel C, Schacker, Timothy W, Boritz, Eli A
Published in Nature (London) (20.09.2018)
Published in Nature (London) (20.09.2018)
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Administration of anti-HIV-1 broadly neutralizing monoclonal antibodies with increased affinity to Fcγ receptors during acute SHIVAD8-EO infection
Dias, Joana, Fabozzi, Giulia, Fourati, Slim, Chen, Xuejun, Liu, Cuiping, Ambrozak, David R, Ransier, Amy, Laboune, Farida, Hu, Jianfei, Shi, Wei, March, Kylie, Maximova, Anna A, Schmidt, Stephen D, Samsel, Jakob, Talana, Chloe A, Ernste, Keenan, Ko, Sung Hee, Lucas, Margaret E, Radecki, Pierce E, Boswell, Kristin L, Nishimura, Yoshiaki, Todd, John-Paul, Martin, Malcolm A, Petrovas, Constantinos, Boritz, Eli A, Doria-Rose, Nicole A, Douek, Daniel C, Sékaly, Rafick-Pierre, Lifson, Jeffrey D, Asokan, Mangaiarkarasi, Gama, Lucio, Mascola, John R, Pegu, Amarendra, Koup, Richard A
Published in Nature communications (29.08.2024)
Published in Nature communications (29.08.2024)
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