Multi-modal generative modeling for joint analysis of single-cell T cell receptor and gene expression data
Drost, Felix, An, Yang, Bonafonte-Pardàs, Irene, Dratva, Lisa M., Lindeboom, Rik G. H., Haniffa, Muzlifah, Teichmann, Sarah A., Theis, Fabian, Lotfollahi, Mohammad, Schubert, Benjamin
Published in Nature communications (03.07.2024)
Published in Nature communications (03.07.2024)
Get full text
Journal Article
Targeting of the CD80/86 proinflammatory axis as a therapeutic strategy to prevent severe COVID-19
Julià, Antonio, Bonafonte-Pardàs, Irene, Gómez, Antonio, López-Lasanta, María, López-Corbeto, Mireia, Martínez-Mateu, Sergio H., Lladós, Jordi, Rodríguez-Nunez, Iván, Myers, Richard M., Marsal, Sara
Published in Scientific reports (01.06.2021)
Published in Scientific reports (01.06.2021)
Get full text
Journal Article
B cells orchestrate tolerance to the neuromyelitis optica autoantigen AQP4
Afzali, Ali Maisam, Nirschl, Lucy, Sie, Christopher, Pfaller, Monika, Ulianov, Oleksii, Hassler, Tobias, Federle, Christine, Petrozziello, Elisabetta, Kalluri, Sudhakar Reddy, Chen, Hsin Hsiang, Tyystjärvi, Sofia, Muschaweckh, Andreas, Lammens, Katja, Delbridge, Claire, Büttner, Andreas, Steiger, Katja, Seyhan, Gönül, Ottersen, Ole Petter, Öllinger, Rupert, Rad, Roland, Jarosch, Sebastian, Straub, Adrian, Mühlbauer, Anton, Grassmann, Simon, Hemmer, Bernhard, Böttcher, Jan P., Wagner, Ingrid, Kreutzfeldt, Mario, Merkler, Doron, Pardàs, Irene Bonafonte, Schmidt Supprian, Marc, Buchholz, Veit R., Heink, Sylvia, Busch, Dirk H., Klein, Ludger, Korn, Thomas
Published in Nature (London) (14.03.2024)
Published in Nature (London) (14.03.2024)
Get full text
Journal Article
Large-scale characterization of cell niches in spatial atlases using bio-inspired graph learning
Birk, Sebastian, Bonafonte-Pardàs, Irene, Feriz, Adib Miraki, Boxall, Adam, Agirre, Eneritz, Memi, Fani, Maguza, Anna, Fan, Rong, Castelo-Branco, Gonçalo, Bayraktar, Omer, Theis, Fabian J, Talavera-López, Carlos, Lotfollahi, Mohammad
Published in bioRxiv (28.02.2024)
Published in bioRxiv (28.02.2024)
Get full text
Paper