Iron fortification adversely affects the gut microbiome, increases pathogen abundance and induces intestinal inflammation in Kenyan infants
Jaeggi, Tanja, Kortman, Guus A M, Moretti, Diego, Chassard, Christophe, Holding, Penny, Dostal, Alexandra, Boekhorst, Jos, Timmerman, Harro M, Swinkels, Dorine W, Tjalsma, Harold, Njenga, Jane, Mwangi, Alice, Kvalsvig, Jane, Lacroix, Christophe, Zimmermann, Michael B
Published in Gut (01.05.2015)
Published in Gut (01.05.2015)
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Journal Article
Gut microbiome in ADHD and its relation to neural reward anticipation
Aarts, Esther, Ederveen, Thomas H A, Naaijen, Jilly, Zwiers, Marcel P, Boekhorst, Jos, Timmerman, Harro M, Smeekens, Sanne P, Netea, Mihai G, Buitelaar, Jan K, Franke, Barbara, van Hijum, Sacha A F T, Arias Vasquez, Alejandro
Published in PloS one (01.09.2017)
Published in PloS one (01.09.2017)
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Journal Article
The lactococcal ICE-ome encodes a repertoire of exchangeable traits with potential industrial relevance
van der Els, Simon, Boekhorst, Jos, Bron, Peter A, Kleerebezem, Michiel
Published in BMC genomics (30.07.2024)
Published in BMC genomics (30.07.2024)
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Journal Article
Degenerate target sites mediate rapid primed CRISPR adaptation
Fineran, Peter C., Gerritzen, Matthias J. H., Suárez-Diez, María, Künne, Tim, Boekhorst, Jos, van Hijum, Sacha A. F. T., Staals, Raymond H. J., Brouns, Stan J. J.
Published in Proceedings of the National Academy of Sciences - PNAS (22.04.2014)
Published in Proceedings of the National Academy of Sciences - PNAS (22.04.2014)
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Journal Article
Lactobacillus paracasei comparative genomics: towards species pan-genome definition and exploitation of diversity
Smokvina, Tamara, Wels, Michiel, Polka, Justyna, Chervaux, Christian, Brisse, Sylvain, Boekhorst, Jos, van Hylckama Vlieg, Johan E T, Siezen, Roland J
Published in PloS one (19.07.2013)
Published in PloS one (19.07.2013)
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Journal Article
Intestinal colonisation patterns in breastfed and formula-fed infants during the first 12 weeks of life reveal sequential microbiota signatures
Timmerman, Harro M., Rutten, Nicole B. M. M., Boekhorst, Jos, Saulnier, Delphine M., Kortman, Guus A. M., Contractor, Nikhat, Kullen, Martin, Floris, Esther, Harmsen, Hermie J. M., Vlieger, Arine M., Kleerebezem, Michiel, Rijkers, Ger T.
Published in Scientific reports (21.08.2017)
Published in Scientific reports (21.08.2017)
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Journal Article
Targeting the Cutaneous Microbiota in Atopic Dermatitis by Coal Tar via AHR-Dependent Induction of Antimicrobial Peptides
Smits, Jos P.H., Ederveen, Thomas H.A., Rikken, Gijs, van den Brink, Noa J.M., van Vlijmen-Willems, Ivonne M.J.J., Boekhorst, Jos, Kamsteeg, Marijke, Schalkwijk, Joost, van Hijum, Sacha A.F.T., Zeeuwen, Patrick L.J.M., van den Bogaard, Ellen H.
Published in Journal of investigative dermatology (01.02.2020)
Published in Journal of investigative dermatology (01.02.2020)
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Journal Article
Environmental and maternal factors shaping tonsillar microbiota development in piglets
Fredriksen, Simen, Guan, Xiaonan, Boekhorst, Jos, Molist, Francesc, van Baarlen, Peter, Wells, Jerry M
Published in BMC microbiology (26.09.2022)
Published in BMC microbiology (26.09.2022)
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Journal Article
Resistome expansion in disease-associated human gut microbiomes
Fredriksen, Simen, de Warle, Stef, van Baarlen, Peter, Boekhorst, Jos, Wells, Jerry M
Published in Microbiome (29.07.2023)
Published in Microbiome (29.07.2023)
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Journal Article
Effect of low-iron micronutrient powder (MNP) on the composition of gut microbiota of Bangladeshi children in a high-iron groundwater setting: a randomized controlled trial
Rahman, Sabuktagin, Kortman, Guus A. M., Boekhorst, Jos, Lee, Patricia, Khan, Moududur R., Ahmed, Faruk
Published in European journal of nutrition (01.09.2021)
Published in European journal of nutrition (01.09.2021)
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Journal Article
Charting host-microbe co-metabolism in skin aging and application to metagenomics data
Alkema, Wynand, Boekhorst, Jos, Eijlander, Robyn T, Schnittger, Steve, De Gruyter, Fini, Lukovac, Sabina, Schilling, Kurt, Kortman, Guus A M
Published in PloS one (10.11.2021)
Published in PloS one (10.11.2021)
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Journal Article
LocateP: genome-scale subcellular-location predictor for bacterial proteins
Zhou, Miaomiao, Boekhorst, Jos, Francke, Christof, Siezen, Roland J
Published in BMC bioinformatics (27.03.2008)
Published in BMC bioinformatics (27.03.2008)
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Journal Article
Collection of human and environmental data on pesticide use in Europe and Argentina: Field study protocol for the SPRINT project
Silva, Vera, Alaoui, Abdallah, Schlünssen, Vivi, Vested, Anne, Graumans, Martien, van Dael, Maurice, Trevisan, Marco, Suciu, Nicoleta, Mol, Hans, Beekmann, Karsten, Figueiredo, Daniel, Harkes, Paula, Hofman, Jakub, Kandeler, Ellen, Abrantes, Nelson, Campos, Isabel, Martínez, María Ángeles, Pereira, Joana Luísa, Goossens, Dirk, Gandrass, Juergen, Debler, Freya, Lwanga, Esperanza Huerta, Jonker, Marlot, van Langevelde, Frank, Sorensen, Martin T, Wells, Jerry M, Boekhorst, Jos, Huss, Anke, Mandrioli, Daniele, Sgargi, Daria, Nathanail, Paul, Nathanail, Judith, Tamm, Lucius, Fantke, Peter, Mark, Jennifer, Grovermann, Christian, Frelih-Larsen, Ana, Herb, Irina, Chivers, Charlotte-Anne, Mills, Jane, Alcon, Francisco, Contreras, Josefina, Baldi, Isabelle, Pasković, Igor, Matjaz, Glavan, Norgaard, Trine, Aparicio, Virginia, Ritsema, Coen J, Geissen, Violette, Scheepers, Paul T J
Published in PloS one (15.11.2021)
Published in PloS one (15.11.2021)
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Journal Article
Maternal Human Milk Oligosaccharide Profile Modulates the Impact of an Intervention with Iron and Galacto-Oligosaccharides in Kenyan Infants
Paganini, Daniela, Uyoga, Mary A, Kortman, Guus A M, Boekhorst, Jos, Schneeberger, Sacha, Karanja, Simon, Hennet, Thierry, Zimmermann, Michael B
Published in Nutrients (29.10.2019)
Published in Nutrients (29.10.2019)
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Journal Article
Microbiome dynamics of human epidermis following skin barrier disruption
Zeeuwen, Patrick LJM, Boekhorst, Jos, Bogaard, Ellen H van den, Koning, Heleen D de, Kerkhof, Peter MC van de, Saulnier, Delphine M, Swam, Iris I van, Hijum, Sacha AFT van, Kleerebezem, Michiel, Schalkwijk, Joost, Timmerman, Harro M
Published in Genome Biology (01.01.2012)
Published in Genome Biology (01.01.2012)
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Journal Article
Prebiotic utilisation provides Lactiplantibacillus plantarum a competitive advantage in vitro , but is not reflected by an increased intestinal fitness
Fuhren, Jori, Schwalbe, Markus, Boekhorst, Jos, Rösch, Christiane, Schols, Henk A, Kleerebezem, Michiel
Published in Gut microbes (2024)
Published in Gut microbes (2024)
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Journal Article
Stool energy density is positively correlated to intestinal transit time and related to microbial enterotypes
Boekhorst, Jos, Venlet, Naomi, Procházková, Nicola, Hansen, Mathias L, Lieberoth, Christian B, Bahl, Martin I, Lauritzen, Lotte, Pedersen, Oluf, Licht, Tine Rask, Kleerebezem, Michiel, Roager, Henrik M
Published in Microbiome (12.12.2022)
Published in Microbiome (12.12.2022)
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Journal Article