Technical advance in targeted NGS analysis enables identification of lung cancer risk-associated low frequency TP53, PIK3CA, and BRAF mutations in airway epithelial cells
Craig, Daniel J, Morrison, Thomas, Khuder, Sadik A, Crawford, Erin L, Wu, Leihong, Xu, Joshua, Blomquist, Thomas M, Willey, James C
Published in BMC cancer (11.11.2019)
Published in BMC cancer (11.11.2019)
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Journal Article
Deep oncopanel sequencing reveals within block position-dependent quality degradation in FFPE processed samples
Zhang, Yifan, Blomquist, Thomas M, Kusko, Rebecca, Stetson, Daniel, Zhang, Zhihong, Yin, Lihui, Sebra, Robert, Gong, Binsheng, Lococo, Jennifer S, Mittal, Vinay K, Novoradovskaya, Natalia, Yeo, Ji-Youn, Dominiak, Nicole, Hipp, Jennifer, Raymond, Amelia, Qiu, Fujun, Arib, Hanane, Smith, Melissa L, Brock, Jay E, Farkas, Daniel H, Craig, Daniel J, Crawford, Erin L, Li, Dan, Morrison, Tom, Tom, Nikola, Xiao, Wenzhong, Yang, Mary, Mason, Christopher E, Richmond, Todd A, Jones, Wendell, Johann, Jr, Donald J, Shi, Leming, Tong, Weida, Willey, James C, Xu, Joshua
Published in Genome Biology (29.06.2022)
Published in Genome Biology (29.06.2022)
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Journal Article
Exposure to the Harmful Algal Bloom (HAB) Toxin Microcystin-LR (MC-LR) Prolongs and Increases Severity of Dextran Sulfate Sodium (DSS)-Induced Colitis
Su, Robin C, Blomquist, Thomas M, Kleinhenz, Andrew L, Khalaf, Fatimah K, Dube, Prabhatchandra, Lad, Apurva, Breidenbach, Joshua D, Mohammed, Chrysan J, Zhang, Shungang, Baum, Caitlin E, Malhotra, Deepak, Kennedy, David J, Haller, Steven T
Published in Toxins (25.06.2019)
Published in Toxins (25.06.2019)
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Journal Article
Targeted RNA-sequencing with competitive multiplex-PCR amplicon libraries
Blomquist, Thomas M, Crawford, Erin L, Lovett, Jennie L, Yeo, Jiyoun, Stanoszek, Lauren M, Levin, Albert, Li, Jia, Lu, Mei, Shi, Leming, Muldrew, Kenneth, Willey, James C
Published in PloS one (13.11.2013)
Published in PloS one (13.11.2013)
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Journal Article
Hyperglycemia induces key genetic and phenotypic changes in human liver epithelial HepG2 cells which parallel the Leprdb/J mouse model of non-alcoholic fatty liver disease (NAFLD)
Su, Robin C, Lad, Apurva, Breidenbach, Joshua D, Blomquist, Thomas M, Gunning, William T, Dube, Prabhatchandra, Kleinhenz, Andrew L, Malhotra, Deepak, Haller, Steven T, Kennedy, David J
Published in PloS one (2019)
Published in PloS one (2019)
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Journal Article
Amphibian Biomass Export from Geographically Isolated Wetlands: Temporal Variability, Species Composition, and Potential Implications for Terrestrial Ecosystems
Earl, Julia E., Blomquist, Sean M., Harper, Elizabeth B., Hocking, Daniel J., Hunter, Malcolm L., Johnson, Jarrett R., Osbourn, Michael S., Patrick, David A., Popescu, Viorel D., Rittenhouse, Tracy A. G., Rothermel, Betsie B.
Published in Diversity (Basel) (01.03.2022)
Published in Diversity (Basel) (01.03.2022)
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Journal Article
Antioxidant Therapy Significantly Attenuates Hepatotoxicity following Low Dose Exposure to Microcystin-LR in a Murine Model of Diet-Induced Non-Alcoholic Fatty Liver Disease
Lad, Apurva, Hunyadi, Jonathan, Connolly, Jacob, Breidenbach, Joshua D, Khalaf, Fatimah K, Dube, Prabhatchandra, Zhang, Shungang, Kleinhenz, Andrew L, Baliu-Rodriguez, David, Isailovic, Dragan, Hinds, Terry D, Gatto-Weis, Cara, Stanoszek, Lauren M, Blomquist, Thomas M, Malhotra, Deepak, Haller, Steven T, Kennedy, David J
Published in Antioxidants (01.08.2022)
Published in Antioxidants (01.08.2022)
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Journal Article
A lung cancer risk classifier comprising genome maintenance genes measured in normal bronchial epithelial cells
Yeo, Jiyoun, Crawford, Erin L, Zhang, Xiaolu, Khuder, Sadik, Chen, Tian, Levin, Albert, Blomquist, Thomas M, Willey, James C
Published in BMC cancer (02.05.2017)
Published in BMC cancer (02.05.2017)
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Journal Article
RNAseq analysis of bronchial epithelial cells to identify COPD-associated genes and SNPs
Yeo, Jiyoun, Morales, Diego A, Chen, Tian, Crawford, Erin L, Zhang, Xiaolu, Blomquist, Thomas M, Levin, Albert M, Massion, Pierre P, Arenberg, Douglas A, Midthun, David E, Mazzone, Peter J, Nathan, Steven D, Wainz, Ronald J, Nana-Sinkam, Patrick, Willey, Paige F S, Arend, Taylor J, Padda, Karanbir, Qiu, Shuhao, Federov, Alexei, Hernandez, Dawn-Alita R, Hammersley, Jeffrey R, Yoon, Youngsook, Safi, Fadi, Khuder, Sadik A, Willey, James C
Published in BMC pulmonary medicine (05.03.2018)
Published in BMC pulmonary medicine (05.03.2018)
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Journal Article
Advancing NGS quality control to enable measurement of actionable mutations in circulating tumor DNA
Willey, James C., Morrison, Tom B., Austermiller, Bradley, Crawford, Erin L., Craig, Daniel J., Blomquist, Thomas M., Jones, Wendell D., Wali, Aminah, Lococo, Jennifer S., Haseley, Nathan, Richmond, Todd A., Novoradovskaya, Natalia, Kusko, Rebecca, Chen, Guangchun, Li, Quan-Zhen, Johann, Donald J., Deveson, Ira W., Mercer, Timothy R., Wu, Leihong, Xu, Joshua
Published in Cell reports methods (22.11.2021)
Published in Cell reports methods (22.11.2021)
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Journal Article
CD40 Receptor Knockout Protects against Microcystin-LR (MC-LR) Prolongation and Exacerbation of Dextran Sulfate Sodium (DSS)-Induced Colitis
Su, Robin C., Warner, Emily A., Breidenbach, Joshua D., Lad, Apurva, Blomquist, Thomas M., Kleinhenz, Andrew L., Modyanov, Nikolai, Malhotra, Deepak, Kennedy, David J., Haller, Steven T.
Published in Biomedicines (02.06.2020)
Published in Biomedicines (02.06.2020)
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Journal Article
A multiplex two-color real-time PCR method for quality-controlled molecular diagnostic testing of FFPE samples
Yeo, Jiyoun, Crawford, Erin L, Blomquist, Thomas M, Stanoszek, Lauren M, Dannemiller, Rachel E, Zyrek, Jill, De Las Casas, Luis E, Khuder, Sadik A, Willey, James C
Published in PloS one (21.02.2014)
Published in PloS one (21.02.2014)
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Journal Article
Stimulator of interferon genes (STING) activation exacerbates experimental colitis in mice
Martin, Gary R., Blomquist, Charlene M., Henare, Kimiora L., Jirik, Frank R.
Published in Scientific reports (03.10.2019)
Published in Scientific reports (03.10.2019)
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Journal Article
Correction: Targeted RNA-Sequencing with Competitive Multiplex-PCR Amplicon Libraries
Blomquist, Thomas M., Crawford, Erin L., Lovett, Jennie L., Yeo, Jiyoun, Stanoszek, Lauren M., Levin, Albert, Li, Jia, Lu, Mei, Shi, Leming, Muldrew, Kenneth, Willey, James C.
Published in PloS one (03.12.2013)
Published in PloS one (03.12.2013)
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Journal Article
Effects of timber harvesting on terrestrial survival of pond-breeding amphibians
Todd, Brian D., Blomquist, Sean M., Harper, Elizabeth B., Osbourn, Michael S.
Published in Forest ecology and management (01.02.2014)
Published in Forest ecology and management (01.02.2014)
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Journal Article
RNA sequencing in human HepG2 hepatocytes reveals PPAR-α mediates transcriptome responsiveness of bilirubin
Gordon, Darren M, Blomquist, Thomas M, Miruzzi, Scott A, McCullumsmith, Robert, Stec, David E, Hinds, Jr, Terry D
Published in Physiological genomics (01.06.2019)
Published in Physiological genomics (01.06.2019)
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Journal Article
Polymer charge-transfer complexes for opto-electronic applications
Liu, Sanchao, Shi, Jianmin, Forsythe, Eric W., Blomquist, Steven M., Chiu, Dave
Published in Synthetic metals (01.07.2009)
Published in Synthetic metals (01.07.2009)
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Journal Article
CEBPG Exhibits Allele-Specific Expression in Human Bronchial Epithelial Cells
Blomquist, Thomas M., Brown, Ronald D., Crawford, Erin L., De La Serna, Ivana, Williams, Kandace, Yoon, Youngsook, Hernandez, Dawn-Alita, Willey, James C.
Published in Gene Regulation and Systems Biology (01.01.2013)
Published in Gene Regulation and Systems Biology (01.01.2013)
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Journal Article