Genomic Markers for Quaternary Ammonium Compound Resistance as a Persistence Indicator for Listeria monocytogenes Contamination in Food Manufacturing Environments
Cooper, Ashley L, Carrillo, Catherine D, DeschÊnes, MylÈne, Blais, Burton W
Published in Journal of food protection (01.03.2021)
Published in Journal of food protection (01.03.2021)
Get full text
Journal Article
GeneSippr: a rapid whole-genome approach for the identification and characterization of foodborne pathogens such as priority Shiga toxigenic Escherichia coli
Lambert, Dominic, Carrillo, Catherine D, Koziol, Adam G, Manninger, Paul, Blais, Burton W
Published in PloS one (10.04.2015)
Published in PloS one (10.04.2015)
Get full text
Journal Article
Modeling the limits of detection for antimicrobial resistance genes in agri-food samples: a comparative analysis of bioinformatics tools
Cooper, Ashley L, Low, Andrew, Wong, Alex, Tamber, Sandeep, Blais, Burton W, Carrillo, Catherine D
Published in BMC microbiology (20.01.2024)
Published in BMC microbiology (20.01.2024)
Get full text
Journal Article
Overcoming Microbial Inhibition of S. Sonnei Through the Exploitation of Genomically Predicted Antibiotic Resistance Profiles for the Development of Food Enrichment Media
Yao, Lang, Cooper, Ashley L., Gill, Alex, Koziol, Adam, Wong, Alex, Blais, Burton W., Carrillo, Catherine D.
Published in Journal of food protection (01.07.2024)
Published in Journal of food protection (01.07.2024)
Get full text
Journal Article
Systematic Evaluation of Whole Genome Sequence-Based Predictions of Salmonella Serotype and Antimicrobial Resistance
Cooper, Ashley L, Low, Andrew J, Koziol, Adam G, Thomas, Matthew C, Leclair, Daniel, Tamber, Sandeep, Wong, Alex, Blais, Burton W, Carrillo, Catherine D
Published in Frontiers in microbiology (03.04.2020)
Published in Frontiers in microbiology (03.04.2020)
Get full text
Journal Article
Strain-specific Recovery of S. sonnei from Artificially Contaminated Baby Carrots: Enhancing Food-safety Investigations with a Customized Shigella Detection Method Based on Genomically predicted Antibiotic Resistance Traits
Yao, Lang, Cooper, Ashley, Lau, Calvin Ho-Fung, Wong, Alex, Blais, Burton W., Carrillo, Catherine D.
Published in Journal of food protection (01.07.2024)
Published in Journal of food protection (01.07.2024)
Get full text
Journal Article
Genomically Informed Custom Selective Enrichment of Shiga Toxigenic Escherichia coli (STEC) Outbreak Strains in Foods Using Antibiotics
Tapp, Kyle, Deschênes, Mylène, Cooper, Ashley, Carrillo, Catherine, Blais, Burton
Published in Journal of food protection (01.03.2023)
Published in Journal of food protection (01.03.2023)
Get full text
Journal Article
Centrifugal microfluidic lab-on-a-chip system with automated sample lysis, DNA amplification and microarray hybridization for identification of enterohemorrhagic Escherichia coli culture isolates
Geissler, Matthias, Brassard, Daniel, Clime, Liviu, Pilar, Ana Victoria C, Malic, Lidija, Daoud, Jamal, Barrère, Virginie, Luebbert, Christian, Blais, Burton W, Corneau, Nathalie, Veres, Teodor
Published in Analyst (London) (26.10.2020)
Published in Analyst (London) (26.10.2020)
Get full text
Journal Article
Genomic characterization of Listeria monocytogenes isolates reveals that their persistence in a pig slaughterhouse is linked to the presence of benzalkonium chloride resistance genes
Cherifi, Tamazight, Carrillo, Catherine, Lambert, Dominic, Miniaï, Ilhem, Quessy, Sylvain, Larivière-Gauthier, Guillaume, Blais, Burton, Fravalo, Philippe
Published in BMC microbiology (20.12.2018)
Published in BMC microbiology (20.12.2018)
Get full text
Journal Article
Systematic Evaluation of Whole-Genome Sequencing Based Prediction of Antimicrobial Resistance in Campylobacter jejuni and C. coli
Hodges, Lisa M., Taboada, Eduardo N., Koziol, Adam, Mutschall, Steven, Blais, Burton W., Inglis, G. Douglas, Leclair, Daniel, Carrillo, Catherine D.
Published in Frontiers in microbiology (16.11.2021)
Published in Frontiers in microbiology (16.11.2021)
Get full text
Journal Article
Polymer Micropillar Arrays for Colorimetric DNA Detection
Geissler, Matthias, Malic, Lidija, Morton, Keith J, Clime, Liviu, Daoud, Jamal, Hernández-Castro, Javier A, Corneau, Nathalie, Blais, Burton W, Veres, Teodor
Published in Analytical chemistry (Washington) (02.06.2020)
Published in Analytical chemistry (Washington) (02.06.2020)
Get full text
Journal Article
Multiplexed Single Intact Cell Droplet Digital PCR (MuSIC ddPCR) Method for Specific Detection of Enterohemorrhagic E. coli (EHEC) in Food Enrichment Cultures
McMahon, Tanis C, Blais, Burton W, Wong, Alex, Carrillo, Catherine D
Published in Frontiers in microbiology (02.03.2017)
Published in Frontiers in microbiology (02.03.2017)
Get full text
Journal Article
Microbial Antagonism in Food-Enrichment Culture: Inhibition of Shiga Toxin-Producing Escherichia coli and Shigella Species
McMahon, Tanis C., Kingombe, Cesar Bin, Mathews, Amit, Seyer, Karine, Wong, Alex, Blais, Burton W., Carrillo, Catherine D.
Published in Frontiers in microbiology (23.06.2022)
Published in Frontiers in microbiology (23.06.2022)
Get full text
Journal Article
Selection of Multidrug-Resistant Bacteria in Medicated Animal Feeds
Brown, Emily E F, Cooper, Ashley, Carrillo, Catherine, Blais, Burton
Published in Frontiers in microbiology (06.03.2019)
Published in Frontiers in microbiology (06.03.2019)
Get full text
Journal Article
Analysis of Antimicrobial Resistance in Bacterial Pathogens Recovered from Food and Human Sources: Insights from 639,087 Bacterial Whole-Genome Sequences in the NCBI Pathogen Detection Database
Cooper, Ashley L, Wong, Alex, Tamber, Sandeep, Blais, Burton W, Carrillo, Catherine D
Published in Microorganisms (Basel) (01.04.2024)
Published in Microorganisms (Basel) (01.04.2024)
Get full text
Journal Article