Taba: A Tool to Analyze the Binding Affinity
da Silva, Amauri Duarte, Bitencourt‐Ferreira, Gabriela, Azevedo, Walter Filgueira
Published in Journal of computational chemistry (05.01.2020)
Published in Journal of computational chemistry (05.01.2020)
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Journal Article
SAnDReS 2.0: Development of machine-learning models to explore the scoring function space
de Azevedo, Jr, Walter Filgueira, Quiroga, Rodrigo, Villarreal, Marcos Ariel, da Silveira, Nelson José Freitas, Bitencourt-Ferreira, Gabriela, da Silva, Amauri Duarte, Veit-Acosta, Martina, Oliveira, Patricia Rufino, Tutone, Marco, Biziukova, Nadezhda, Poroikov, Vladimir, Tarasova, Olga, Baud, Stéphaine
Published in Journal of computational chemistry (15.10.2024)
Published in Journal of computational chemistry (15.10.2024)
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Journal Article
Electrostatic Potential Energy in Protein-Drug Complexes
Bitencourt-Ferreira, Gabriela, de Azevedo Junior, Walter Filgueira
Published in Current medicinal chemistry (01.01.2021)
Published in Current medicinal chemistry (01.01.2021)
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Journal Article
Application of Machine Learning Techniques to Predict Binding Affinity for Drug Targets: A Study of Cyclin-Dependent Kinase 2
Bitencourt-Ferreira, Gabriela, Duarte da Silva, Amauri, Filgueira de Azevedo, Jr, Walter
Published in Current medicinal chemistry (01.01.2021)
Published in Current medicinal chemistry (01.01.2021)
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Journal Article
Exploring Scoring Function Space: Developing Computational Models for Drug Discovery
Bitencourt-Ferreira, Gabriela, Villarreal, Marcos A, Quiroga, Rodrigo, Biziukova, Nadezhda, Poroikov, Vladimir, Tarasova, Olga, de Azevedo Junior, Walter F
Published in Current medicinal chemistry (01.01.2024)
Published in Current medicinal chemistry (01.01.2024)
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Journal Article
Protein-Ligand Docking Simulations with AutoDock4 Focused on the Main Protease of SARS-CoV-2
de Azevedo Junior, Walter Filgueira, Bitencourt-Ferreira, Gabriela, Godoy, Joana Retzke, Adriano, Hilda Mayela Aran, Dos Santos Bezerra, Wallyson André, Dos Santos Soares, Alexandra Martins
Published in Current medicinal chemistry (01.01.2021)
Published in Current medicinal chemistry (01.01.2021)
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Journal Article
Molegro Virtual Docker for Docking
Bitencourt-Ferreira, Gabriela, de Azevedo, Jr, Walter Filgueira
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2019)
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2019)
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Journal Article
Docking with SwissDock
Bitencourt-Ferreira, Gabriela, de Azevedo, Jr, Walter Filgueira
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2019)
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2019)
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Journal Article
Docking with AutoDock4
Bitencourt-Ferreira, Gabriela, Pintro, Val Oliveira, de Azevedo, Jr, Walter Filgueira
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2019)
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2019)
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Journal Article
Hydrogen Bonds in Protein-Ligand Complexes
Bitencourt-Ferreira, Gabriela, Veit-Acosta, Martina, de Azevedo, Jr, Walter Filgueira
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2019)
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2019)
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Journal Article
Homology Modeling of Protein Targets with MODELLER
Bitencourt-Ferreira, Gabriela, de Azevedo, Jr, Walter Filgueira
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2019)
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2019)
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Journal Article
Molecular Docking Simulations with ArgusLab
Bitencourt-Ferreira, Gabriela, de Azevedo, Jr, Walter Filgueira
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2019)
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2019)
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Journal Article
Machine Learning to Predict Binding Affinity
Bitencourt-Ferreira, Gabriela, de Azevedo, Jr, Walter Filgueira
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2019)
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2019)
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Journal Article
Van der Waals Potential in Protein Complexes
Bitencourt-Ferreira, Gabriela, Veit-Acosta, Martina, de Azevedo, Jr, Walter Filgueira
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2019)
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2019)
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Journal Article
Exploring the Scoring Function Space
Bitencourt-Ferreira, Gabriela, de Azevedo, Jr, Walter Filgueira
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2019)
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2019)
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Journal Article
Development of CDK-targeted scoring functions for prediction of binding affinity
Levin, Nayara Maria Bernhardt, Pintro, Val Oliveira, Bitencourt-Ferreira, Gabriela, de Mattos, Bruna Boldrini, de Castro Silvério, Ariadne, de Azevedo, Walter Filgueira
Published in Biophysical chemistry (01.04.2018)
Published in Biophysical chemistry (01.04.2018)
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Journal Article