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circlize implements and enhances circular visualization in R
Gu, Zuguang, Gu, Lei, Eils, Roland, Schlesner, Matthias, Brors, Benedikt
Published in Bioinformatics (Oxford, England) (01.10.2014)
Published in Bioinformatics (Oxford, England) (01.10.2014)
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ASTRAL-III: polynomial time species tree reconstruction from partially resolved gene trees
Zhang, Chao, Rabiee, Maryam, Sayyari, Erfan, Mirarab, Siavash
Published in BMC bioinformatics (08.05.2018)
Published in BMC bioinformatics (08.05.2018)
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Opportunities and challenges for ChatGPT and large language models in biomedicine and health
Tian, Shubo, Jin, Qiao, Yeganova, Lana, Lai, Po-Ting, Zhu, Qingqing, Chen, Xiuying, Yang, Yifan, Chen, Qingyu, Kim, Won, Comeau, Donald C, Islamaj, Rezarta, Kapoor, Aadit, Gao, Xin, Lu, Zhiyong
Published in Briefings in bioinformatics (01.01.2024)
Published in Briefings in bioinformatics (01.01.2024)
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InterProScan 5: genome-scale protein function classification
Jones, Philip, Binns, David, Chang, Hsin-Yu, Fraser, Matthew, Li, Weizhong, McAnulla, Craig, McWilliam, Hamish, Maslen, John, Mitchell, Alex, Nuka, Gift, Pesseat, Sebastien, Quinn, Antony F., Sangrador-Vegas, Amaia, Scheremetjew, Maxim, Yong, Siew-Yit, Lopez, Rodrigo, Hunter, Sarah
Published in Bioinformatics (01.05.2014)
Published in Bioinformatics (01.05.2014)
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FoldX 5.0: working with RNA, small molecules and a new graphical interface
Delgado, Javier, Radusky, Leandro G, Cianferoni, Damiano, Serrano, Luis
Published in Bioinformatics (15.10.2019)
Published in Bioinformatics (15.10.2019)
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UniRef clusters: a comprehensive and scalable alternative for improving sequence similarity searches
Suzek, Baris E., Wang, Yuqi, Huang, Hongzhan, McGarvey, Peter B., Wu, Cathy H.
Published in Bioinformatics (15.03.2015)
Published in Bioinformatics (15.03.2015)
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ExpansionHunter: a sequence-graph-based tool to analyze variation in short tandem repeat regions
Dolzhenko, Egor, Deshpande, Viraj, Schlesinger, Felix, Krusche, Peter, Petrovski, Roman, Chen, Sai, Emig-Agius, Dorothea, Gross, Andrew, Narzisi, Giuseppe, Bowman, Brett, Scheffler, Konrad, van Vugt, Joke J F A, French, Courtney, Sanchis-Juan, Alba, Ibáñez, Kristina, Tucci, Arianna, Lajoie, Bryan R, Veldink, Jan H, Raymond, F Lucy, Taft, Ryan J, Bentley, David R, Eberle, Michael A
Published in Bioinformatics (01.11.2019)
Published in Bioinformatics (01.11.2019)
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Bayesian weighted Mendelian randomization for causal inference based on summary statistics
Zhao, Jia, Ming, Jingsi, Hu, Xianghong, Chen, Gang, Liu, Jin, Yang, Can
Published in Bioinformatics (01.03.2020)
Published in Bioinformatics (01.03.2020)
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Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays
Aryee, Martin J., Jaffe, Andrew E., Corrada-Bravo, Hector, Ladd-Acosta, Christine, Feinberg, Andrew P., Hansen, Kasper D., Irizarry, Rafael A.
Published in Bioinformatics (15.05.2014)
Published in Bioinformatics (15.05.2014)
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MOLI: multi-omics late integration with deep neural networks for drug response prediction
Sharifi-Noghabi, Hossein, Zolotareva, Olga, Collins, Colin C, Ester, Martin
Published in Bioinformatics (15.07.2019)
Published in Bioinformatics (15.07.2019)
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Causal analysis approaches in Ingenuity Pathway Analysis
Krämer, Andreas, Green, Jeff, Pollard, Jack, Tugendreich, Stuart
Published in Bioinformatics (15.02.2014)
Published in Bioinformatics (15.02.2014)
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UCSC Cell Browser: visualize your single-cell data
Speir, Matthew L, Bhaduri, Aparna, Markov, Nikolay S, Moreno, Pablo, Nowakowski, Tomasz J, Papatheodorou, Irene, Pollen, Alex A, Raney, Brian J, Seninge, Lucas, Kent, W James, Haeussler, Maximilian
Published in Bioinformatics (07.12.2021)
Published in Bioinformatics (07.12.2021)
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