Environmental DNA metabarcoding: Transforming how we survey animal and plant communities
Deiner, Kristy, Bik, Holly M., Mächler, Elvira, Seymour, Mathew, Lacoursière‐Roussel, Anaïs, Altermatt, Florian, Creer, Simon, Bista, Iliana, Lodge, David M., Vere, Natasha, Pfrender, Michael E., Bernatchez, Louis
Published in Molecular ecology (01.11.2017)
Published in Molecular ecology (01.11.2017)
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Journal Article
The ecologist's field guide to sequence‐based identification of biodiversity
Creer, Simon, Deiner, Kristy, Frey, Serita, Porazinska, Dorota, Taberlet, Pierre, Thomas, W. Kelley, Potter, Caitlin, Bik, Holly M., Freckleton, Robert
Published in Methods in ecology and evolution (01.09.2016)
Published in Methods in ecology and evolution (01.09.2016)
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Journal Article
Host-associated microbiomes drive structure and function of marine ecosystems
Wilkins, Laetitia G E, Leray, Matthieu, O'Dea, Aaron, Yuen, Benedict, Peixoto, Raquel S, Pereira, Tiago J, Bik, Holly M, Coil, David A, Duffy, J Emmett, Herre, Edward Allen, Lessios, Harilaos A, Lucey, Noelle M, Mejia, Luis C, Rasher, Douglas B, Sharp, Koty H, Sogin, Emilia M, Thacker, Robert W, Vega Thurber, Rebecca, Wcislo, William T, Wilbanks, Elizabeth G, Eisen, Jonathan A
Published in PLoS biology (11.11.2019)
Published in PLoS biology (11.11.2019)
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Journal Article
Microbiota of the indoor environment: a meta-analysis
Adams, Rachel I, Bateman, Ashley C, Bik, Holly M, Meadow, James F
Published in Microbiome (13.10.2015)
Published in Microbiome (13.10.2015)
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Journal Article
Dramatic shifts in benthic microbial eukaryote communities following the Deepwater Horizon oil spill
Bik, Holly M, Halanych, Kenneth M, Sharma, Jyotsna, Thomas, W Kelley
Published in PloS one (06.06.2012)
Published in PloS one (06.06.2012)
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Journal Article
PhyloSift: phylogenetic analysis of genomes and metagenomes
Darling, Aaron E, Jospin, Guillaume, Lowe, Eric, Matsen, 4th, Frederick A, Bik, Holly M, Eisen, Jonathan A
Published in PeerJ (San Francisco, CA) (09.01.2014)
Published in PeerJ (San Francisco, CA) (09.01.2014)
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Journal Article
Intra-genomic variation in the ribosomal repeats of nematodes
Bik, Holly M, Fournier, David, Sung, Way, Bergeron, R Daniel, Thomas, W Kelley
Published in PloS one (11.10.2013)
Published in PloS one (11.10.2013)
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Journal Article
Metagenetic community analysis of microbial eukaryotes illuminates biogeographic patterns in deep-sea and shallow water sediments
BIK, HOLLY M., SUNG, WAY, DE LEY, PAUL, BALDWIN, JAMES G., SHARMA, JYOTSNA, ROCHA-OLIVARES, AXAYÁCATL, THOMAS, W. KELLEY
Published in Molecular ecology (01.03.2012)
Published in Molecular ecology (01.03.2012)
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Journal Article
Acidity promotes degradation of multi-species environmental DNA in lotic mesocosms
Seymour, Mathew, Durance, Isabelle, Cosby, Bernard J, Ransom-Jones, Emma, Deiner, Kristy, Ormerod, Steve J, Colbourne, John K, Wilgar, Gregory, Carvalho, Gary R, de Bruyn, Mark, Edwards, François, Emmett, Bridget A, Bik, Holly M, Creer, Simon
Published in Communications biology (01.01.2018)
Published in Communications biology (01.01.2018)
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Journal Article
An integrated spatio-temporal view of riverine biodiversity using environmental DNA metabarcoding
Perry, William Bernard, Seymour, Mathew, Orsini, Luisa, Jâms, Ifan Bryn, Milner, Nigel, Edwards, François, Harvey, Rachel, de Bruyn, Mark, Bista, Iliana, Walsh, Kerry, Emmett, Bridget, Blackman, Rosetta, Altermatt, Florian, Lawson Handley, Lori, Mächler, Elvira, Deiner, Kristy, Bik, Holly M, Carvalho, Gary, Colbourne, John, Cosby, Bernard Jack, Durance, Isabelle, Creer, Simon
Published in Nature communications (23.05.2024)
Published in Nature communications (23.05.2024)
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Journal Article
Natural experiments and long-term monitoring are critical to understand and predict marine host–microbe ecology and evolution
Leray, Matthieu, Wilkins, Laetitia G. E., Apprill, Amy, Bik, Holly M., Clever, Friederike, Connolly, Sean R., De León, Marina E., Duffy, J. Emmett, Ezzat, Leïla, Gignoux-Wolfsohn, Sarah, Herre, Edward Allen, Kaye, Jonathan Z., Kline, David I., Kueneman, Jordan G., McCormick, Melissa K., McMillan, W. Owen, O’Dea, Aaron, Pereira, Tiago J., Petersen, Jillian M., Petticord, Daniel F., Torchin, Mark E., Vega Thurber, Rebecca, Videvall, Elin, Wcislo, William T., Yuen, Benedict, Eisen, Jonathan A.
Published in PLoS biology (19.08.2021)
Published in PLoS biology (19.08.2021)
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Journal Article
Ten simple rules for effective online outreach
Bik, Holly M, Dove, Alistair D M, Goldstein, Miriam C, Helm, Rebecca R, MacPherson, Rick, Martini, Kim, Warneke, Alexandria, McClain, Craig
Published in PLoS computational biology (01.04.2015)
Published in PLoS computational biology (01.04.2015)
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Journal Article