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Parkin, Isobel A P, Koh, Chushin, Tang, Haibao, Robinson, Stephen J, Kagale, Sateesh, Clarke, Wayne E, Town, Chris D, Nixon, John, Krishnakumar, Vivek, Bidwell, Shelby L, Denoeud, France, Belcram, Harry, Links, Matthew G, Just, Jérémy, Clarke, Carling, Bender, Tricia, Huebert, Terry, Mason, Annaliese S, Pires, J Chris, Barker, Guy, Moore, Jonathan, Walley, Peter G, Manoli, Sahana, Batley, Jacqueline, Edwards, David, Nelson, Matthew N, Wang, Xiyin, Paterson, Andrew H, King, Graham, Bancroft, Ian, Chalhoub, Boulos, Sharpe, Andrew G
Published in Genome Biology (10.06.2014)
Published in Genome Biology (10.06.2014)
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Hidden genomic evolution in a morphospecies-The landscape of rapidly evolving genes in Tetrahymena
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Published in PLoS biology (03.06.2019)
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Rapid and sensitive detection of genome contamination at scale with FCS-GX
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Published in Genome Biology (26.02.2024)
Published in Genome Biology (26.02.2024)
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Protein interaction data curation: the International Molecular Exchange (IMEx) consortium
Orchard, Sandra, Kerrien, Samuel, Abbani, Sara, Aranda, Bruno, Bhate, Jignesh, Bidwell, Shelby, Bridge, Alan, Briganti, Leonardo, Brinkman, Fiona S L, Brinkman, Fiona, Cesareni, Gianni, Chatr-aryamontri, Andrew, Chautard, Emilie, Chen, Carol, Dumousseau, Marine, Goll, Johannes, Hancock, Robert E W, Hancock, Robert, Hannick, Linda I, Jurisica, Igor, Khadake, Jyoti, Lynn, David J, Mahadevan, Usha, Perfetto, Livia, Raghunath, Arathi, Ricard-Blum, Sylvie, Roechert, Bernd, Salwinski, Lukasz, Stümpflen, Volker, Tyers, Mike, Uetz, Peter, Xenarios, Ioannis, Hermjakob, Henning
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Published in Nature methods (01.04.2012)
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MTGD: The Medicago truncatula genome database
Krishnakumar, Vivek, Kim, Maria, Rosen, Benjamin D, Karamycheva, Svetlana, Bidwell, Shelby L, Tang, Haibao, Town, Christopher D
Published in Plant and cell physiology (01.01.2015)
Published in Plant and cell physiology (01.01.2015)
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Comprehensive Survey of the Plasmodium Life Cycle by Genomic, Transcriptomic, and Proteomic Analyses
Hall, Neil, Karras, Marianna, Raine, J. Dale, Carlton, Jane M, Kooij, Taco W. A, Berriman, Matthew, Florens, Laurence, Janssen, Christoph S, Pain, Arnab, Christophides, Georges K, James, Keith, Rutherford, Kim, Harris, Barbara, Harris, David, Churcher, Carol, Quail, Michael A, Ormond, Doug, Doggett, Jon, Trueman, Holly E, Mendoza, Jacqui, Bidwell, Shelby L, Rajandream, Marie-Adele, Carucci, Daniel J, Yates, John R, Kafatos, Fotis C, Janse, Chris J, Barrell, Bart, Turner, C. Michael R, Waters, Andrew P, Sinden, Robert E
Published in Science (American Association for the Advancement of Science) (07.01.2005)
Published in Science (American Association for the Advancement of Science) (07.01.2005)
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Reassociation kinetics-based approach for partial genome sequencing of the cattle tick, Rhipicephalus (Boophilus) microplus
Guerrero, Felix D, Moolhuijzen, Paula, Peterson, Daniel G, Bidwell, Shelby, Caler, Elisabet, Bellgard, Matthew, Nene, Vishvanath M, Djikeng, Appolinaire
Published in BMC genomics (11.06.2010)
Published in BMC genomics (11.06.2010)
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Structure of the germline genome of Tetrahymena thermophila and relationship to the massively rearranged somatic genome
Hamilton, Eileen P, Kapusta, Aurélie, Huvos, Piroska E, Bidwell, Shelby L, Zafar, Nikhat, Tang, Haibao, Hadjithomas, Michalis, Krishnakumar, Vivek, Badger, Jonathan H, Caler, Elisabet V, Russ, Carsten, Zeng, Qiandong, Fan, Lin, Levin, Joshua Z, Shea, Terrance, Young, Sarah K, Hegarty, Ryan, Daza, Riza, Gujja, Sharvari, Wortman, Jennifer R, Birren, Bruce W, Nusbaum, Chad, Thomas, Jainy, Carey, Clayton M, Pritham, Ellen J, Feschotte, Cédric, Noto, Tomoko, Mochizuki, Kazufumi, Papazyan, Romeo, Taverna, Sean D, Dear, Paul H, Cassidy-Hanley, Donna M, Xiong, Jie, Miao, Wei, Orias, Eduardo, Coyne, Robert S
Published in eLife (28.11.2016)
Published in eLife (28.11.2016)
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Genome sequence of Babesia bovis and comparative analysis of apicomplexan hemoprotozoa
Brayton, Kelly A, Lau, Audrey O T, Herndon, David R, Hannick, Linda, Kappmeyer, Lowell S, Berens, Shawn J, Bidwell, Shelby L, Brown, Wendy C, Crabtree, Jonathan, Fadrosh, Doug, Feldblum, Tamara, Forberger, Heather A, Haas, Brian J, Howell, Jeanne M, Khouri, Hoda, Koo, Hean, Mann, David J, Norimine, Junzo, Paulsen, Ian T, Radune, Diana, Ren, Qinghu, Smith, Jr, Roger K, Suarez, Carlos E, White, Owen, Wortman, Jennifer R, Knowles, Jr, Donald P, McElwain, Terry F, Nene, Vishvanath M
Published in PLoS pathogens (01.10.2007)
Published in PLoS pathogens (01.10.2007)
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Immune responses to Plasmodium vivax pre‐erythrocytic stage antigens in naturally exposed Duffy‐negative humans: a potential model for identification of liver‐stage antigens
Wang, Ruobing, Arevalo‐Herrera, Myriam, Gardner, Malcolm J., Bonelo, Anilza, Carlton, Jane M., Gomez, Andres, Vera, Omaira, Soto, Liliana, Vergara, Juana, Bidwell, Shelby L., Domingo, Alexander, Fraser, Claire M., Herrera, Socrates
Published in European journal of immunology (01.06.2005)
Published in European journal of immunology (01.06.2005)
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An improved genome release (version Mt4.0) for the model legume Medicago truncatula
Tang, Haibao, Krishnakumar, Vivek, Bidwell, Shelby, Rosen, Benjamin, Chan, Agnes, Zhou, Shiguo, Gentzbittel, Laurent, Childs, Kevin L, Yandell, Mark, Gundlach, Heidrun, Mayer, Klaus F X, Schwartz, David C, Town, Christopher D
Published in BMC genomics (27.04.2014)
Published in BMC genomics (27.04.2014)
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Reassociation kinetics-based approach for partial genome sequencing of the cattle tick, Rhipicephalus
Guerrero, Felix D, Moolhuijzen, Paula, Peterson, Daniel G, Bidwell, Shelby, Caler, Elisabet, Bellgard, Matthew, Nene, Vishvanath M, Djikeng, Appolinaire
Published in BMC genomics (11.06.2010)
Published in BMC genomics (11.06.2010)
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Corrigendum: Protein interaction data curation: the International Molecular Exchange (IMEx) consortium
Orchard, Sandra, Kerrien, Samuel, Abbani, Sara, Aranda, Bruno, Bhate, Jignesh, Bidwell, Shelby, Bridge, Alan, Briganti, Leonardo, Brinkman, Fiona, Cesareni, Gianni, Chatr-aryamontri, Andrew, Chautard, Emilie, Chen, Carol, Dumousseau, Marine, Goll, Johannes, Hancock, Robert, Hannick, Linda I, Jurisica, Igor, Khadake, Jyoti, Lynn, David J, Mahadevan, Usha, Perfetto, Livia, Raghunath, Arathi, Ricard-blum, Sylvie, Roechert, Bernd, Salwinski, Lukasz, Stümpflen, Volker, Tyers, Mike, Uetz, Peter, Xenarios, Ioannis, Hermjakob, Henning
Published in Nature methods (01.06.2012)
Published in Nature methods (01.06.2012)
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Erratum: Corrigendum: Protein interaction data curation: the International Molecular Exchange (IMEx) consortium
Orchard, Sandra, Kerrien, Samuel, Abbani, Sara, Aranda, Bruno, Bhate, Jignesh, Bidwell, Shelby, Bridge, Alan, Briganti, Leonardo, Brinkman, Fiona, Cesareni, Gianni, Chatr-aryamontri, Andrew, Chautard, Emilie, Chen, Carol, Dumousseau, Marine, Goll, Johannes, Hancock, Robert, Hannick, Linda I, Jurisica, Igor, Khadake, Jyoti, Lynn, David J, Mahadevan, Usha, Perfetto, Livia, Raghunath, Arathi, Ricard-Blum, Sylvie, Roechert, Bernd, Salwinski, Lukasz, Stümpflen, Volker, Tyers, Mike, Uetz, Peter, Xenarios, Ioannis, Hermjakob, Henning
Published in Nature methods (30.05.2012)
Published in Nature methods (30.05.2012)
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Protein interaction data curation: the International Molecular Exchange consortium
Published in Nature methods
(01.06.2012)
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Sequencing of Culex quinquefasciatus Establishes a Platform for Mosquito Comparative Genomics
ARENSBURGER, Peter, MEGY, Karine, CAMPBELL, Corey L, CAMPBELL, Kathryn S, CASOLA, Claudio, CASTRO, Marta T, CHANDRAMOULISWARAN, Ishwar, CHAPMAN, Sinéad B, CHRISTLEY, Scott, COSTAS, Javier, EISENSTADT, Eric, FESCHOTTE, Cedric, WATERHOUSE, Robert M, FRASER-LIGGETT, Claire, GUIGO, Roderic, HAAS, Brian, HAMMOND, Martin, HANSSON, Bill S, HEMINGWAY, Janet, HILL, Sharon R, HOWARTH, Clint, IGNELL, Rickard, KENNEDY, Ryan C, ABRUDAN, Jenica, KODIRA, Chinnappa D, LOBO, Neil F, CHUNHONG MAO, MAYHEW, George, MICHEL, Kristin, MORI, Akio, NANNAN LIU, NAVEIRA, Horacio, NENE, Vishvanath, NGUYEN, Nam, AMEDEO, Paolo, PEARSON, Matthew D, PRITHAM, Ellen J, PUIU, Daniela, YUMIN QI, RANSON, Hilary, RIBEIRO, Jose M. C, ROBERSTON, Hugh M, SEVERSON, David W, SHUMWAY, Martin, STANKE, Mario, ANTELO, Beatriz, STRAUSBERG, Robert L, CHENG SUN, SUTTON, Granger, ZHIJIAN TU, TUBIO, Jose Manuel C, UNGER, Maria F, VANLANDINGHAM, Dana L, VILELLA, Albert J, WHITE, Owen, WHITE, Jared R, BARTHOLOMAY, Lyric, BIDWELL, Shelby, CALER, Elisabet, CAMARA, Francisco
Published in Science (American Association for the Advancement of Science) (2010)
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Published in Science (American Association for the Advancement of Science) (2010)
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Rapid and sensitive detection of genome contamination at scale with FCS-GX
Astashyn, Alexander, Tvedte, Eric S, Sweeney, Deacon, Sapojnikov, Victor, Bouk, Nathan, Joukov, Victor, Mozes, Eyal, Strope, Pooja K, Sylla, Pape M, Wagner, Lukas, Bidwell, Shelby L, Clark, Karen, Davis, Emily W, Smith-White, Brian, Hlavina, Wratko, Pruitt, Kim D, Schneider, Valerie A, Murphy, Terence D
Published in bioRxiv : the preprint server for biology (06.06.2023)
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Published in bioRxiv : the preprint server for biology (06.06.2023)
Journal Article
Rapid and sensitive detection of genome contamination at scale with FCS-GX
Astashyn, Alexander, Tvedte, Eric S, Sweeney, Deacon, Sapojnikov, Victor, Bouk, Nathan, Joukov, Victor, Mozes, Eyal, Strope, Pooja K, Sylla, Pape M, Wagner, Lukas, Bidwell, Shelby L, Clark, Karen, Davis, Emily W, Smith-White, Brian, Hlavina, Wratko, Pruitt, Kim D, Schneider, Valerie A, Murphy, Terence D
Published in bioRxiv (06.06.2023)
Published in bioRxiv (06.06.2023)
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