Spatial single cell metabolomics: Current challenges and future developments
Saunders, Kyle D.G., Lewis, Holly-May, Beste, Dany JV, Cexus, Olivier, Bailey, Melanie J.
Published in Current opinion in chemical biology (01.08.2023)
Published in Current opinion in chemical biology (01.08.2023)
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GSMN-TB: a web-based genome-scale network model of Mycobacterium tuberculosis metabolism
Beste, Dany J V, Hooper, Tracy, Stewart, Graham, Bonde, Bhushan, Avignone-Rossa, Claudio, Bushell, Michael E, Wheeler, Paul, Klamt, Steffen, Kierzek, Andrzej M, McFadden, Johnjoe
Published in Genome biology (01.01.2007)
Published in Genome biology (01.01.2007)
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Differential Producibility Analysis (DPA) of Transcriptomic Data with Metabolic Networks: Deconstructing the Metabolic Response of M. tuberculosis: e1002060
Bonde, Bhushan K, Beste, Dany JV, Laing, Emma, Kierzek, Andrzej M, McFadden, Johnjoe
Published in PLoS computational biology (01.06.2011)
Published in PLoS computational biology (01.06.2011)
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13C Metabolic Flux Analysis Identifies an Unusual Route for Pyruvate Dissimilation in Mycobacteria which Requires Isocitrate Lyase and Carbon Dioxide Fixation
Beste, Dany J. V., Bonde, Bhushan, Hawkins, Nathaniel, Ward, Jane L., Beale, Michael H., Noack, Stephan, Nöh, Katharina, Kruger, Nicholas J., Ratcliffe, R. George, McFadden, Johnjoe
Published in PLoS pathogens (21.07.2011)
Published in PLoS pathogens (21.07.2011)
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Systems-Based Approaches to Probing Metabolic Variation within the Mycobacterium tuberculosis Complex: e75913
Lofthouse, Emma K, Wheeler, Paul R, Beste, Dany JV, Khatri, Bhagwati L, Wu, Huihai, Mendum, Tom A, Kierzek, Andrzej M, McFadden, Johnjoe
Published in PloS one (01.09.2013)
Published in PloS one (01.09.2013)
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GSMN-TB: a web-based genome-scale network model of Mycobacterium tuberculosismetabolism
Beste, Dany JV, Hooper, Tracy, Stewart, Graham, Bonde, Bhushan, Avignone-Rossa, Claudio, Bushell, Michael E, Wheeler, Paul, Klamt, Steffen, Kierzek, Andrzej M, McFadden, Johnjoe
Published in Genome biology (23.05.2007)
Published in Genome biology (23.05.2007)
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Structural and molecular dynamics of Mycobacterium tuberculosis malic enzyme, a potential anti-TB drug target
Burley, Kalistyn H, Cuthbert, Bonnie J, Basu, Piyali, Newcombe, Jane, Irimpan, Ervin M, Quechol, Robert, Foik, Ilona P, Mobley, David L, Beste, Dany Jv, Goulding, Celia W
Published in bioRxiv (07.07.2020)
Published in bioRxiv (07.07.2020)
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Metabolic flux partitioning between the TCA cycle and glyoxylate shunt combined with a reversible methyl citrate cycle provide nutritional flexibility for Mycobacterium tuberculosis
Borah, Khushboo, Mendum, Tom A, Hawkins, Nathaniel D, Ward, Jane L, Beale, Michael H, Larrouy-Maumus, Gerald, Bhatt, Apoorva, Moulin, Martine, Haertlein, Michael, Strohmeier, Gernot, Pichler, Harald, syth, V Trevor, Noack, Stephen, Goulding, Celia W, Mcfadden, Johnjoe, Beste, Dany Jv
Published in bioRxiv (31.01.2021)
Published in bioRxiv (31.01.2021)
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13C-Flux Spectral Analysis of Host-Pathogen Metabolism Reveals a Mixed Diet for Intracellular Mycobacterium tuberculosis
Beste, Dany J.V., Nöh, Katharina, Niedenführ, Sebastian, Mendum, Tom A., Hawkins, Nathaniel D., Ward, Jane L., Beale, Michael H., Wiechert, Wolfgang, McFadden, Johnjoe
Published in Chemistry & biology (22.08.2013)
Published in Chemistry & biology (22.08.2013)
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