Optimal-Transport Analysis of Single-Cell Gene Expression Identifies Developmental Trajectories in Reprogramming
Schiebinger, Geoffrey, Shu, Jian, Tabaka, Marcin, Cleary, Brian, Subramanian, Vidya, Solomon, Aryeh, Gould, Joshua, Liu, Siyan, Lin, Stacie, Berube, Peter, Lee, Lia, Chen, Jenny, Brumbaugh, Justin, Rigollet, Philippe, Hochedlinger, Konrad, Jaenisch, Rudolf, Regev, Aviv, Lander, Eric S.
Published in Cell (07.02.2019)
Published in Cell (07.02.2019)
Get full text
Journal Article
Optimal-Transport Analysis of Single-Cell Gene Expression Identifies Developmental Trajectories in Reprogramming
Schiebinger, Geoffrey, Shu, Jian, Tabaka, Marcin, Cleary, Brian, Subramanian, Vidya, Solomon, Aryeh, Gould, Joshua, Liu, Siyan, Lin, Stacie, Berube, Peter, Lee, Lia, Chen, Jenny, Brumbaugh, Justin, Rigollet, Philippe, Hochedlinger, Konrad, Jaenisch, Rudolf, Regev, Aviv, Lander, Eric S.
Published in Cell (07.03.2019)
Published in Cell (07.03.2019)
Get full text
Journal Article
Human iPSC-derived microglia assume a primary microglia-like state after transplantation into the neonatal mouse brain
Svoboda, Devon S., Barrasa, M. Inmaculada, Shu, Jian, Rietjens, Rosalie, Zhang, Shupei, Mitalipova, Maya, Berube, Peter, Fu, Dongdong, Shultz, Leonard D., Bell, George W., Jaenisch, Rudolf
Published in Proceedings of the National Academy of Sciences - PNAS (10.12.2019)
Published in Proceedings of the National Academy of Sciences - PNAS (10.12.2019)
Get full text
Journal Article
Single-cell DNA methylome and 3D multi-omic atlas of the adult mouse brain
Liu, Hanqing, Zeng, Qiurui, Zhou, Jingtian, Bartlett, Anna, Wang, Bang-An, Berube, Peter, Tian, Wei, Kenworthy, Mia, Altshul, Jordan, Nery, Joseph R., Chen, Huaming, Castanon, Rosa G., Zu, Songpeng, Li, Yang Eric, Lucero, Jacinta, Osteen, Julia K., Pinto-Duarte, Antonio, Lee, Jasper, Rink, Jon, Cho, Silvia, Emerson, Nora, Nunn, Michael, O’Connor, Carolyn, Wu, Zhanghao, Stoica, Ion, Yao, Zizhen, Smith, Kimberly A., Tasic, Bosiljka, Luo, Chongyuan, Dixon, Jesse R., Zeng, Hongkui, Ren, Bing, Behrens, M. Margarita, Ecker, Joseph R.
Published in Nature (London) (14.12.2023)
Published in Nature (London) (14.12.2023)
Get full text
Journal Article
Reconstruction of developmental landscapes by optimal-transport analysis of single-cell gene expression sheds light on cellular reprogramming
Schiebinger, Geoffrey, Shu, Jian, Tabaka, Marcin, Cleary, Brian, Subramanian, Vidya, Solomon, Aryeh, Liu, Siyan, Lin, Stacie, Berube, Peter, Lee, Lia, Chen, Jenny, Brumbaugh, Justin, Rigollet, Philippe, Hochedlinger, Konrad, Jaenisch, Rudolf, Regev, Aviv, Lander, Eric
Published in bioRxiv (27.09.2017)
Published in bioRxiv (27.09.2017)
Get full text
Paper
Single-cell DNA Methylome and 3D Multi-omic Atlas of the Adult Mouse Brain
Liu, Hanqing, Zeng, Qiurui, Zhou, Jingtian, Bartlett, Anna, Wang, Bang-An, Berube, Peter, Tian, Wei, Kenworthy, Mia, Altshul, Jordan, Nery, Joseph R, Chen, Huaming, Castanon, Rosa G, Zu, Songpeng, Li, Yang Eric, Lucero, Jacinta, Osteen, Julia K, Pinto-Duarte, Antonio, Lee, Jasper, Rink, Jon, Cho, Silvia, Emerson, Nora, Nunn, Michael, O'Connor, Carolyn, Yao, Zizhen, Smith, Kimberly A, Tasic, Bosiljka, Zeng, Hongkui, Luo, Chongyuan, Dixon, Jesse R, Ren, Bing, Behrens, M Margarita, Ecker, Joseph R
Published in bioRxiv (18.04.2023)
Published in bioRxiv (18.04.2023)
Get full text
Journal Article