Crystal structure of the entire respiratory complex I
Baradaran, Rozbeh, Berrisford, John M, Minhas, Gurdeep S, Sazanov, Leonid A
Published in Nature (London) (28.02.2013)
Published in Nature (London) (28.02.2013)
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Structural Basis for the Mechanism of Respiratory Complex I
Berrisford, John M., Sazanov, Leonid A.
Published in The Journal of biological chemistry (23.10.2009)
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PDBe: improved findability of macromolecular structure data in the PDB
Armstrong, David R, Berrisford, John M, Conroy, Matthew J, Gutmanas, Aleksandras, Anyango, Stephen, Choudhary, Preeti, Clark, Alice R, Dana, Jose M, Deshpande, Mandar, Dunlop, Roisin, Gane, Paul, Gáborová, Romana, Gupta, Deepti, Haslam, Pauline, Koča, Jaroslav, Mak, Lora, Mir, Saqib, Mukhopadhyay, Abhik, Nadzirin, Nurul, Nair, Sreenath, Paysan-Lafosse, Typhaine, Pravda, Lukas, Sehnal, David, Salih, Osman, Smart, Oliver, Tolchard, James, Varadi, Mihaly, Svobodova-Vařeková, Radka, Zaki, Hossam, Kleywegt, Gerard J, Velankar, Sameer
Published in Nucleic acids research (08.01.2020)
Published in Nucleic acids research (08.01.2020)
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Structure of bacterial respiratory complex I
Berrisford, John M., Baradaran, Rozbeh, Sazanov, Leonid A.
Published in Biochimica et biophysica acta (01.07.2016)
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Validation of Structures in the Protein Data Bank
Gore, Swanand, Sanz García, Eduardo, Hendrickx, Pieter M.S., Gutmanas, Aleksandras, Westbrook, John D., Yang, Huanwang, Feng, Zukang, Baskaran, Kumaran, Berrisford, John M., Hudson, Brian P., Ikegawa, Yasuyo, Kobayashi, Naohiro, Lawson, Catherine L., Mading, Steve, Mak, Lora, Mukhopadhyay, Abhik, Oldfield, Thomas J., Patwardhan, Ardan, Peisach, Ezra, Sahni, Gaurav, Sekharan, Monica R., Sen, Sanchayita, Shao, Chenghua, Smart, Oliver S., Ulrich, Eldon L., Yamashita, Reiko, Quesada, Martha, Young, Jasmine Y., Nakamura, Haruki, Markley, John L., Berman, Helen M., Burley, Stephen K., Velankar, Sameer, Kleywegt, Gerard J.
Published in Structure (London) (05.12.2017)
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OneDep: Unified wwPDB System for Deposition, Biocuration, and Validation of Macromolecular Structures in the PDB Archive
Young, Jasmine Y., Westbrook, John D., Feng, Zukang, Sala, Raul, Peisach, Ezra, Oldfield, Thomas J., Sen, Sanchayita, Gutmanas, Aleksandras, Armstrong, David R., Berrisford, John M., Chen, Li, Chen, Minyu, Di Costanzo, Luigi, Dimitropoulos, Dimitris, Gao, Guanghua, Ghosh, Sutapa, Gore, Swanand, Guranovic, Vladimir, Hendrickx, Pieter M.S., Hudson, Brian P., Igarashi, Reiko, Ikegawa, Yasuyo, Kobayashi, Naohiro, Lawson, Catherine L., Liang, Yuhe, Mading, Steve, Mak, Lora, Mir, M. Saqib, Mukhopadhyay, Abhik, Patwardhan, Ardan, Persikova, Irina, Rinaldi, Luana, Sanz-Garcia, Eduardo, Sekharan, Monica R., Shao, Chenghua, Swaminathan, G. Jawahar, Tan, Lihua, Ulrich, Eldon L., van Ginkel, Glen, Yamashita, Reiko, Yang, Huanwang, Zhuravleva, Marina A., Quesada, Martha, Kleywegt, Gerard J., Berman, Helen M., Markley, John L., Nakamura, Haruki, Velankar, Sameer, Burley, Stephen K.
Published in Structure (London) (07.03.2017)
Published in Structure (London) (07.03.2017)
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Community recommendations on cryoEM data archiving and validation
Kleywegt, Gerard J, Adams, Paul D, Butcher, Sarah J, Lawson, Catherine L, Rohou, Alexis, Rosenthal, Peter B, Subramaniam, Sriram, Topf, Maya, Abbott, Sanja, Baldwin, Philip R, Berrisford, John M, Bricogne, Gérard, Choudhary, Preeti, Croll, Tristan I, Danev, Radostin, Ganesan, Sai J, Grant, Timothy, Gutmanas, Aleksandras, Henderson, Richard, Heymann, J Bernard, Huiskonen, Juha T, Istrate, Andrei, Kato, Takayuki, Lander, Gabriel C, Lok, Shee Mei, Ludtke, Steven J, Murshudov, Garib N, Pye, Ryan, Pintilie, Grigore D, Richardson, Jane S, Sachse, Carsten, Salih, Osman, Scheres, Sjors H W, Schroeder, Gunnar F, Sorzano, Carlos Oscar S, Stagg, Scott M, Wang, Zhe, Warshamanage, Rangana, Westbrook, John D, Winn, Martyn D, Young, Jasmine Y, Burley, Stephen K, Hoch, Jeffrey C, Kurisu, Genji, Morris, Kyle, Patwardhan, Ardan, Velankar, Sameer
Published in IUCrJ (01.03.2024)
Published in IUCrJ (01.03.2024)
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PDBe: towards reusable data delivery infrastructure at protein data bank in Europe
Mir, Saqib, Alhroub, Younes, Anyango, Stephen, Armstrong, David R, Berrisford, John M, Clark, Alice R, Conroy, Matthew J, Dana, Jose M, Deshpande, Mandar, Gupta, Deepti, Gutmanas, Aleksandras, Haslam, Pauline, Mak, Lora, Mukhopadhyay, Abhik, Nadzirin, Nurul, Paysan-Lafosse, Typhaine, Sehnal, David, Sen, Sanchayita, Smart, Oliver S, Varadi, Mihaly, Kleywegt, Gerard J, Velankar, Sameer
Published in Nucleic acids research (04.01.2018)
Published in Nucleic acids research (04.01.2018)
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Catalysis by Glomerella cingulata Cutinase Requires Conformational Cycling between the Active and Inactive States of Its Catalytic Triad
Nyon, Mun Peak, Rice, David W., Berrisford, John M., Hounslow, Andrea M., Moir, Arthur J.G., Huang, Huazhang, Nathan, Sheila, Mahadi, Nor Muhammad, Bakar, Farah Diba Abu, Craven, C. Jeremy
Published in Journal of molecular biology (09.01.2009)
Published in Journal of molecular biology (09.01.2009)
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PDBx/mmCIF Ecosystem: Foundational Semantic Tools for Structural Biology
Westbrook, John D., Young, Jasmine Y., Shao, Chenghua, Feng, Zukang, Guranovic, Vladimir, Lawson, Catherine L., Vallat, Brinda, Adams, Paul D., Berrisford, John M, Bricogne, Gerard, Diederichs, Kay, Joosten, Robbie P., Keller, Peter, Moriarty, Nigel W., Sobolev, Oleg V., Velankar, Sameer, Vonrhein, Clemens, Waterman, David G., Kurisu, Genji, Berman, Helen M., Burley, Stephen K., Peisach, Ezra
Published in Journal of molecular biology (15.06.2022)
Published in Journal of molecular biology (15.06.2022)
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PDBe: towards reusable data delivery infrastructure at protein data bank in Europe
Mir, Saqib, Alhroub, Younes, Anyango, Stephen, Armstrong, David R, Berrisford, John M, Clark, Alice R, Conroy, Matthew J, Dana, Jose M, Deshpande, Mandar, Gupta, Deepti, Gutmanas, Aleksandras, Haslam, Pauline, Mak, Lora, Mukhopadhyay, Abhik, Nadzirin, Nurul, Paysan-Lafosse, Typhaine, Sehnal, David, Sen, Sanchayita, Smart, Oliver S, Varadi, Mihaly, Kleywegt, Gerard J, Velankar, Sameer
Published in Nucleic acids research (04.01.2018)
Published in Nucleic acids research (04.01.2018)
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PDBe: improved accessibility of macromolecular structure data from PDB and EMDB
Velankar, Sameer, van Ginkel, Glen, Alhroub, Younes, Battle, Gary M, Berrisford, John M, Conroy, Matthew J, Dana, Jose M, Gore, Swanand P, Gutmanas, Aleksandras, Haslam, Pauline, Hendrickx, Pieter M S, Lagerstedt, Ingvar, Mir, Saqib, Fernandez Montecelo, Manuel A, Mukhopadhyay, Abhik, Oldfield, Thomas J, Patwardhan, Ardan, Sanz-García, Eduardo, Sen, Sanchayita, Slowley, Robert A, Wainwright, Michael E, Deshpande, Mandar S, Iudin, Andrii, Sahni, Gaurav, Salavert Torres, Jose, Hirshberg, Miriam, Mak, Lora, Nadzirin, Nurul, Armstrong, David R, Clark, Alice R, Smart, Oliver S, Korir, Paul K, Kleywegt, Gerard J
Published in Nucleic acids research (04.01.2016)
Published in Nucleic acids research (04.01.2016)
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PDBe: Protein Data Bank in Europe
Gutmanas, Aleksandras, Alhroub, Younes, Battle, Gary M, Berrisford, John M, Bochet, Estelle, Conroy, Matthew J, Dana, Jose M, Fernandez Montecelo, Manuel A, van Ginkel, Glen, Gore, Swanand P, Haslam, Pauline, Hatherley, Rowan, Hendrickx, Pieter M S, Hirshberg, Miriam, Lagerstedt, Ingvar, Mir, Saqib, Mukhopadhyay, Abhik, Oldfield, Thomas J, Patwardhan, Ardan, Rinaldi, Luana, Sahni, Gaurav, Sanz-García, Eduardo, Sen, Sanchayita, Slowley, Robert A, Velankar, Sameer, Wainwright, Michael E, Kleywegt, Gerard J
Published in Nucleic acids research (01.01.2014)
Published in Nucleic acids research (01.01.2014)
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Evidence Supporting a cis-enediol-based Mechanism for Pyrococcus furiosus Phosphoglucose Isomerase
Berrisford, John M., Hounslow, Andrea M., Akerboom, Jasper, Hagen, Wilfred R., Brouns, Stan J.J., van der Oost, John, Murray, Iain A., Michael Blackburn, G., Waltho, Jonathan P., Rice, David W., Baker, Patrick J.
Published in Journal of molecular biology (19.05.2006)
Published in Journal of molecular biology (19.05.2006)
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Worldwide Protein Data Bank biocuration supporting open access to high-quality 3D structural biology data
Young, Jasmine Y, Westbrook, John D, Feng, Zukang, Peisach, Ezra, Persikova, Irina, Sala, Raul, Sen, Sanchayita, Berrisford, John M, Swaminathan, G Jawahar, Oldfield, Thomas J, Gutmanas, Aleksandras, Igarashi, Reiko, Armstrong, David R, Baskaran, Kumaran, Chen, Li, Chen, Minyu, Clark, Alice R, Di Costanzo, Luigi, Dimitropoulos, Dimitris, Gao, Guanghua, Ghosh, Sutapa, Gore, Swanand, Guranovic, Vladimir, Hendrickx, Pieter M S, Hudson, Brian P, Ikegawa, Yasuyo, Kengaku, Yumiko, Lawson, Catherine L, Liang, Yuhe, Mak, Lora, Mukhopadhyay, Abhik, Narayanan, Buvaneswari, Nishiyama, Kayoko, Patwardhan, Ardan, Sahni, Gaurav, Sanz-García, Eduardo, Sato, Junko, Sekharan, Monica R, Shao, Chenghua, Smart, Oliver S, Tan, Lihua, van Ginkel, Glen, Yang, Huanwang, Zhuravleva, Marina A, Markley, John L, Nakamura, Haruki, Kurisu, Genji, Kleywegt, Gerard J, Velankar, Sameer, Berman, Helen M, Burley, Stephen K
Published in Database : the journal of biological databases and curation (01.01.2018)
Published in Database : the journal of biological databases and curation (01.01.2018)
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Small molecule annotation for the Protein Data Bank
Sen, Sanchayita, Young, Jasmine, Berrisford, John M, Chen, Minyu, Conroy, Matthew J, Dutta, Shuchismita, Di Costanzo, Luigi, Gao, Guanghua, Ghosh, Sutapa, Hudson, Brian P, Igarashi, Reiko, Kengaku, Yumiko, Liang, Yuhe, Peisach, Ezra, Persikova, Irina, Mukhopadhyay, Abhik, Narayanan, Buvaneswari Coimbatore, Sahni, Gaurav, Sato, Junko, Sekharan, Monica, Shao, Chenghua, Tan, Lihua, Zhuravleva, Marina A
Published in Database : the journal of biological databases and curation (2014)
Published in Database : the journal of biological databases and curation (2014)
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Journal Article
Crystal structure of Pyrococcus furiosus phosphoglucose isomerase. Implications for substrate binding and catalysis
Berrisford, John M, Akerboom, Jasper, Turnbull, Andrew P, de Geus, Daniel, Sedelnikova, Svetlana E, Staton, Ian, McLeod, Cameron W, Verhees, Corne H, van der Oost, John, Rice, David W, Baker, Patrick J
Published in The Journal of biological chemistry (29.08.2003)
Published in The Journal of biological chemistry (29.08.2003)
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