The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote small sub-unit rRNA sequences with curated taxonomy
Guillou, Laure, Bachar, Dipankar, Audic, Stéphane, Bass, David, Berney, Cédric, Bittner, Lucie, Boutte, Christophe, Burgaud, Gaétan, de Vargas, Colomban, Decelle, Johan, Del Campo, Javier, Dolan, John R, Dunthorn, Micah, Edvardsen, Bente, Holzmann, Maria, Kooistra, Wiebe H C F, Lara, Enrique, Le Bescot, Noan, Logares, Ramiro, Mahé, Frédéric, Massana, Ramon, Montresor, Marina, Morard, Raphael, Not, Fabrice, Pawlowski, Jan, Probert, Ian, Sauvadet, Anne-Laure, Siano, Raffaele, Stoeck, Thorsten, Vaulot, Daniel, Zimmermann, Pascal, Christen, Richard
Published in Nucleic acids research (01.01.2013)
Published in Nucleic acids research (01.01.2013)
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Journal Article
Freshwater Perkinsea and marine-freshwater colonizations revealed by pyrosequencing and phylogeny of environmental rDNA
Bråte, Jon, Logares, Ramiro, Berney, Cédric, Ree, Dan Kristofer, Klaveness, Dag, Jakobsen, Kjetill S, Shalchian-Tabrizi, Kamran
Published in The ISME Journal (01.09.2010)
Published in The ISME Journal (01.09.2010)
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Journal Article
How good are global DNA‐based environmental surveys for detecting all protist diversity? Arcellinida as an example of biased representation
Useros, Fernando, García‐Cunchillos, Iván, Henry, Nicolas, Berney, Cédric, Lara, Enrique
Published in Environmental microbiology (01.03.2024)
Published in Environmental microbiology (01.03.2024)
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Journal Article
Global perspective of environmental distribution and diversity of Perkinsea (Alveolata) explored by a meta-analysis of eDNA surveys
Metz, Sebastian, Itoïz, Sarah, Obiol, Aleix, Derelle, Evelyne, Massana, Ramon, Berney, Cédric, de Vargas, Colomban, Soudant, Philippe, Monier, Adam, Chambouvet, Aurélie
Published in Scientific reports (17.11.2023)
Published in Scientific reports (17.11.2023)
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Journal Article
Vampires in the oceans: predatory cercozoan amoebae in marine habitats
Berney, Cédric, Romac, Sarah, Mahé, Frédéric, Santini, Sébastien, Siano, Raffaele, Bass, David
Published in The ISME Journal (01.12.2013)
Published in The ISME Journal (01.12.2013)
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Journal Article
Clarifying the Relationships between Microsporidia and Cryptomycota
Bass, David, Czech, Lucas, Williams, Bryony A. P., Berney, Cédric, Dunthorn, Micah, Mahé, Frederic, Torruella, Guifré, Stentiford, Grant D., Williams, Tom A.
Published in The Journal of eukaryotic microbiology (01.11.2018)
Published in The Journal of eukaryotic microbiology (01.11.2018)
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Journal Article
CBOL protist working group: barcoding eukaryotic richness beyond the animal, plant, and fungal kingdoms
Pawlowski, Jan, Audic, Stéphane, Adl, Sina, Bass, David, Belbahri, Lassaâd, Berney, Cédric, Bowser, Samuel S, Cepicka, Ivan, Decelle, Johan, Dunthorn, Micah, Fiore-Donno, Anna Maria, Gile, Gillian H, Holzmann, Maria, Jahn, Regine, Jirků, Miloslav, Keeling, Patrick J, Kostka, Martin, Kudryavtsev, Alexander, Lara, Enrique, Lukeš, Julius, Mann, David G, Mitchell, Edward A D, Nitsche, Frank, Romeralo, Maria, Saunders, Gary W, Simpson, Alastair G B, Smirnov, Alexey V, Spouge, John L, Stern, Rowena F, Stoeck, Thorsten, Zimmermann, Jonas, Schindel, David, de Vargas, Colomban
Published in PLoS biology (01.11.2012)
Published in PLoS biology (01.11.2012)
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Journal Article
Patterns of eukaryotic diversity from the surface to the deep-ocean sediment
Cordier, Tristan, Angeles, Inès Barrenechea, Henry, Nicolas, Lejzerowicz, Franck, Berney, Cédric, Morard, Raphaël, Brandt, Angelika, Cambon-Bonavita, Marie-Anne, Guidi, Lionel, Lombard, Fabien, Arbizu, Pedro Martinez, Massana, Ramon, Orejas, Covadonga, Poulain, Julie, Smith, Craig R, Wincker, Patrick, Arnaud-Haond, Sophie, Gooday, Andrew J, de Vargas, Colomban, Pawlowski, Jan
Published in Science advances (04.02.2022)
Published in Science advances (04.02.2022)
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Journal Article
Soil protistology rebooted: 30 fundamental questions to start with
Geisen, Stefan, Mitchell, Edward A.D., Wilkinson, David M., Adl, Sina, Bonkowski, Michael, Brown, Matthew W., Fiore-Donno, Anna Maria, Heger, Thierry J., Jassey, Vincent E.J., Krashevska, Valentyna, Lahr, Daniel J.G., Marcisz, Katarzyna, Mulot, Matthieu, Payne, Richard, Singer, David, Anderson, O. Roger, Charman, Dan J., Ekelund, Flemming, Griffiths, Bryan S., Rønn, Regin, Smirnov, Alexey, Bass, David, Belbahri, Lassaâd, Berney, Cédric, Blandenier, Quentin, Chatzinotas, Antonis, Clarholm, Marianne, Dunthorn, Micah, Feest, Alan, Fernández, Leonardo D., Foissner, Wilhelm, Fournier, Bertrand, Gentekaki, Eleni, Hájek, Michal, Helder, Johannes, Jousset, Alexandre, Koller, Robert, Kumar, Santosh, La Terza, Antonietta, Lamentowicz, Mariusz, Mazei, Yuri, Santos, Susana S., Seppey, Christophe V.W., Spiegel, Frederick W., Walochnik, Julia, Winding, Anne, Lara, Enrique
Published in Soil biology & biochemistry (01.08.2017)
Published in Soil biology & biochemistry (01.08.2017)
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Journal Article
Expansion of the ‘Reticulosphere’: Diversity of Novel Branching and Network-forming Amoebae Helps to Define Variosea (Amoebozoa)
Berney, Cédric, Geisen, Stefan, Van Wichelen, Jeroen, Nitsche, Frank, Vanormelingen, Pieter, Bonkowski, Michael, Bass, David
Published in Protist (01.05.2015)
Published in Protist (01.05.2015)
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Journal Article
O short-branch Microsporidia, where art thou? Identifying diversity hotspots for future sampling
Gross, Megan, Rajter, Ľubomír, Mahé, Frédéric, Bass, David, Berney, Cédric, Henry, Nicolas, de Vargas, Colomban, Dunthorn, Micah
Published in European journal of protistology (01.10.2024)
Published in European journal of protistology (01.10.2024)
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Journal Article
The Large Subunit rDNA Sequence of Plasmodiophora brassicae Does not Contain Intra-species Polymorphism
Schwelm, Arne, Berney, Cédric, Dixelius, Christina, Bass, David, Neuhauser, Sigrid
Published in Protist (01.12.2016)
Published in Protist (01.12.2016)
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Journal Article
UniEuk: Time to Speak a Common Language in Protistology
Berney, Cédric, Ciuprina, Andreea, Bender, Sara, Brodie, Juliet, Edgcomb, Virginia, Kim, Eunsoo, Rajan, Jeena, Parfrey, Laura Wegener, Adl, Sina, Audic, Stéphane, Bass, David, Caron, David A., Cochrane, Guy, Czech, Lucas, Dunthorn, Micah, Geisen, Stefan, Glöckner, Frank Oliver, Mahé, Frédéric, Quast, Christian, Kaye, Jonathan Z., Simpson, Alastair G. B., Stamatakis, Alexandros, Campo, Javier, Yilmaz, Pelin, Vargas, Colomban
Published in The Journal of eukaryotic microbiology (01.05.2017)
Published in The Journal of eukaryotic microbiology (01.05.2017)
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Journal Article
Lineage-specific molecular probing reveals novel diversity and ecological partitioning of haplosporidians
Hartikainen, Hanna, Ashford, Oliver S, Berney, Cédric, Okamura, Beth, Feist, Stephen W, Baker-Austin, Craig, Stentiford, Grant D, Bass, David
Published in The ISME Journal (01.01.2014)
Published in The ISME Journal (01.01.2014)
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Journal Article
Parasites dominate hyperdiverse soil protist communities in Neotropical rainforests
Mahé, Frédéric, de Vargas, Colomban, Bass, David, Czech, Lucas, Stamatakis, Alexandros, Lara, Enrique, Singer, David, Mayor, Jordan, Bunge, John, Sernaker, Sarah, Siemensmeyer, Tobias, Trautmann, Isabelle, Romac, Sarah, Berney, Cédric, Kozlov, Alexey, Mitchell, Edward A. D., Seppey, Christophe V. W., Egge, Elianne, Lentendu, Guillaume, Wirth, Rainer, Trueba, Gabriel, Dunthorn, Micah
Published in Nature ecology & evolution (20.03.2017)
Published in Nature ecology & evolution (20.03.2017)
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Journal Article
Environmental Sequencing Fills the Gap Between Parasitic Haplosporidians and Free‐living Giant Amoebae
Ward, Georgia M., Neuhauser, Sigrid, Groben, René, Ciaghi, Stefan, Berney, Cédric, Romac, Sarah, Bass, David
Published in The Journal of eukaryotic microbiology (01.09.2018)
Published in The Journal of eukaryotic microbiology (01.09.2018)
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Journal Article
Long amplicons as a tool to identify variable regions of ribosomal RNA for improved taxonomic resolution and diagnostic assay design in microeukaryotes: using ascetosporea as a case study
Hooper, Chantelle, Ward, Georgia M., Foster, Rachel, Skujina, Ilze, Ironside, Joseph E., Berney, Cédric, Bass, David
Published in Frontiers in ecology and evolution (27.10.2023)
Published in Frontiers in ecology and evolution (27.10.2023)
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