How to Count Our Microbes? The Effect of Different Quantitative Microbiome Profiling Approaches
Galazzo, Gianluca, van Best, Niels, Benedikter, Birke J, Janssen, Kevin, Bervoets, Liene, Driessen, Christel, Oomen, Melissa, Lucchesi, Mayk, van Eijck, Pascalle H, Becker, Heike E F, Hornef, Mathias W, Savelkoul, Paul H, Stassen, Frank R M, Wolffs, Petra F, Penders, John
Published in Frontiers in cellular and infection microbiology (07.08.2020)
Published in Frontiers in cellular and infection microbiology (07.08.2020)
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Journal Article
NAD+ metabolism is a key modulator of bacterial respiratory epithelial infections
Klabunde, Björn, Wesener, André, Bertrams, Wilhelm, Beinborn, Isabell, Paczia, Nicole, Surmann, Kristin, Blankenburg, Sascha, Wilhelm, Jochen, Serrania, Javier, Knoops, Kèvin, Elsayed, Eslam M, Laakmann, Katrin, Jung, Anna Lena, Kirschbaum, Andreas, Hammerschmidt, Sven, Alshaar, Belal, Gisch, Nicolas, Abu Mraheil, Mobarak, Becker, Anke, Völker, Uwe, Vollmeister, Evelyn, Benedikter, Birke J, Schmeck, Bernd
Published in Nature communications (02.10.2023)
Published in Nature communications (02.10.2023)
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Journal Article
Novel computational analysis of large transcriptome datasets identifies sets of genes distinguishing chronic obstructive pulmonary disease from healthy lung samples
Roessler, Fabienne K, Benedikter, Birke J, Schmeck, Bernd, Bar, Nadav
Published in Scientific reports (13.05.2021)
Published in Scientific reports (13.05.2021)
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Journal Article
Streptococcus pneumoniae disrupts the structure of the golgi apparatus and subsequent epithelial cytokine response in an H2O2-dependent manner
Klabunde, Björn, Wesener, André, Bertrams, Wilhelm, Ringshandl, Stephan, Halder, Luke D., Vollmeister, Evelyn, Schmeck, Bernd, Benedikter, Birke J.
Published in Cell communication and signaling (17.08.2023)
Published in Cell communication and signaling (17.08.2023)
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Journal Article
Alterations in the molecular control of mitochondrial turnover in COPD lung and airway epithelial cells
Tulen, Christy B M, van de Wetering, Cheryl, Schiffers, Caspar H J, Weltjens, Ellen, Benedikter, Birke J, Leermakers, Pieter A, Boukhaled, Juliana H, Drittij, Marie-José, Schmeck, Bernd T, Reynaert, Niki L, Opperhuizen, Antoon, van Schooten, Frederik-Jan, Remels, Alexander H V
Published in Scientific reports (27.02.2024)
Published in Scientific reports (27.02.2024)
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Journal Article
Platelet extracellular vesicles induce a pro-inflammatory smooth muscle cell phenotype
Vajen, Tanja, Benedikter, Birke J., Heinzmann, Alexandra C. A., Vasina, Elena M., Henskens, Yvonne, Parsons, Martin, Maguire, Patricia B., Stassen, Frank R., Heemskerk, Johan W. M., Schurgers, Leon J., Koenen, Rory R.
Published in Journal of extracellular vesicles (01.12.2017)
Published in Journal of extracellular vesicles (01.12.2017)
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Journal Article
A time window for rescuing dying retinal ganglion cells
You, Wenting, Knoops, Kèvin, Boesten, Iris, Berendschot, Tos T J M, van Zandvoort, Marc A M J, Benedikter, Birke J, Webers, Carroll A B, Reutelingsperger, Chris P M, Gorgels, Theo G M F
Published in Cell communication and signaling (31.01.2024)
Published in Cell communication and signaling (31.01.2024)
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Journal Article
PGC-1a mediated mitochondrial biogenesis promotes recovery and survival of neuronal cells from cellular degeneration
You, Wenting, Knoops, Kèvin, Berendschot, Tos T J M, Benedikter, Birke J, Webers, Carroll A B, Reutelingsperger, Chris P M, Gorgels, Theo G M F
Published in Cell death discovery (17.04.2024)
Published in Cell death discovery (17.04.2024)
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Journal Article
Proteomic analysis reveals procoagulant properties of cigarette smoke-induced extracellular vesicles
Benedikter, Birke J., Bouwman, Freek G., Heinzmann, Alexandra C. A., Vajen, Tanja, Mariman, Edwin C., Wouters, Emiel F. M., Savelkoul, Paul H. M., Koenen, Rory R., Rohde, Gernot G. U., van Oerle, Rene, Spronk, Henri M., Stassen, Frank R. M.
Published in Journal of extracellular vesicles (01.12.2019)
Published in Journal of extracellular vesicles (01.12.2019)
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Journal Article
Mitochondrial DNA D-loop variants correlate with a primary open-angle glaucoma subgroup
Vallbona-Garcia, Antoni, Lindsey, Patrick J., Kamps, Rick, Stassen, Alphons P. M., Nguyen, Nhan, van Tienen, Florence H. J., Hamers, Ilse H. J., Hardij, Rianne, van Gisbergen, Marike W., Benedikter, Birke J., de Coo, Irenaeus F. M., Webers, Carroll A. B., Gorgels, Theo G. M. F., Smeets, Hubert J. M.
Published in Frontiers in ophthalmology (17.01.2024)
Published in Frontiers in ophthalmology (17.01.2024)
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Journal Article
The clinical role of host and bacterial-derived extracellular vesicles in pneumonia
Jung, Anna Lena, Schmeck, Bernd, Wiegand, Marie, Bedenbender, Katrin, Benedikter, Birke J.
Published in Advanced drug delivery reviews (01.09.2021)
Published in Advanced drug delivery reviews (01.09.2021)
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Journal Article
Ultrafiltration combined with size exclusion chromatography efficiently isolates extracellular vesicles from cell culture media for compositional and functional studies
Benedikter, Birke J, Bouwman, Freek G, Vajen, Tanja, Heinzmann, Alexandra C A, Grauls, Gert, Mariman, Edwin C, Wouters, Emiel F M, Savelkoul, Paul H, Lopez-Iglesias, Carmen, Koenen, Rory R, Rohde, Gernot G U, Stassen, Frank R M
Published in Scientific reports (10.11.2017)
Published in Scientific reports (10.11.2017)
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Journal Article
Influenza virus‐mediated suppression of bronchial Chitinase‐3‐like 1 secretion promotes secondary pneumococcal infection
Karwelat, Diana, Schmeck, Bernd, Ringel, Marc, Benedikter, Birke J., Hübner, Kathleen, Beinborn, Isabell, Maisner, Andrea, Schulte, Leon N., Vollmeister, Evelyn
Published in The FASEB journal (01.12.2020)
Published in The FASEB journal (01.12.2020)
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Journal Article
Redox-dependent thiol modifications: implications for the release of extracellular vesicles
Benedikter, Birke J., Weseler, Antje R., Wouters, Emiel F. M., Savelkoul, Paul H. M., Rohde, Gernot G. U., Stassen, Frank R. M.
Published in Cellular and molecular life sciences : CMLS (01.07.2018)
Published in Cellular and molecular life sciences : CMLS (01.07.2018)
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Journal Article
NF-κB-mediated inhibition of microRNA-149-5p regulates Chitinase-3-like 1 expression in human airway epithelial cells
Hübner, Kathleen, Karwelat, Diana, Pietsch, Emma, Beinborn, Isabell, Winterberg, Sarah, Bedenbender, Katrin, Benedikter, Birke J., Schmeck, Bernd, Vollmeister, Evelyn
Published in Cellular signalling (01.03.2020)
Published in Cellular signalling (01.03.2020)
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Journal Article
Cigarette smoke extract induced exosome release is mediated by depletion of exofacial thiols and can be inhibited by thiol-antioxidants
Benedikter, Birke J., Volgers, Charlotte, van Eijck, Pascalle H., Wouters, Emiel F.M., Savelkoul, Paul H.M., Reynaert, Niki L., Haenen, Guido R.M.M., Rohde, Gernot G.U., Weseler, Antje R., Stassen, Frank R.M.
Published in Free radical biology & medicine (01.07.2017)
Published in Free radical biology & medicine (01.07.2017)
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Journal Article
Personalized medicine for patients with COPD: where are we?
Franssen, Frits Me, Alter, Peter, Bar, Nadav, Benedikter, Birke J, Iurato, Stella, Maier, Dieter, Maxheim, Michael, Roessler, Fabienne K, Spruit, Martijn A, Vogelmeier, Claus F, Wouters, Emiel Fm, Schmeck, Bernd
Published in International journal of chronic obstructive pulmonary disease (01.07.2019)
Published in International journal of chronic obstructive pulmonary disease (01.07.2019)
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Journal Article
Extracellular vesicles released in response to respiratory exposures: implications for chronic disease
Benedikter, Birke J., Wouters, Emiel F. M., Savelkoul, Paul H. M., Rohde, Gernot G. U., Stassen, Frank R. M.
Published in Journal of toxicology and environmental health. Part B, Critical reviews (01.01.2018)
Published in Journal of toxicology and environmental health. Part B, Critical reviews (01.01.2018)
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Journal Article