Engineering circular RNA for enhanced protein production
Chen, Robert, Wang, Sean K, Belk, Julia A, Amaya, Laura, Li, Zhijian, Cardenas, Angel, Abe, Brian T, Chen, Chun-Kan, Wender, Paul A, Chang, Howard Y
Published in Nature biotechnology (01.02.2023)
Published in Nature biotechnology (01.02.2023)
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Journal Article
Transient rest restores functionality in exhausted CAR-T cells through epigenetic remodeling
Weber, Evan W, Parker, Kevin R, Sotillo, Elena, Lynn, Rachel C, Anbunathan, Hima, Lattin, John, Good, Zinaida, Belk, Julia A, Daniel, Bence, Klysz, Dorota, Malipatlolla, Meena, Xu, Peng, Bashti, Malek, Heitzeneder, Sabine, Labanieh, Louai, Vandris, Panayiotis, Majzner, Robbie G, Qi, Yanyan, Sandor, Katalin, Chen, Ling-Chun, Prabhu, Snehit, Gentles, Andrew J, Wandless, Thomas J, Satpathy, Ansuman T, Chang, Howard Y, Mackall, Crystal L
Published in Science (American Association for the Advancement of Science) (02.04.2021)
Published in Science (American Association for the Advancement of Science) (02.04.2021)
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Journal Article
Discovery and functional interrogation of SARS-CoV-2 RNA-host protein interactions
Flynn, Ryan A., Belk, Julia A., Qi, Yanyan, Yasumoto, Yuki, Wei, Jin, Alfajaro, Mia Madel, Shi, Quanming, Mumbach, Maxwell R., Limaye, Aditi, DeWeirdt, Peter C., Schmitz, Cameron O., Parker, Kevin R., Woo, Elizabeth, Chang, Howard Y., Horvath, Tamas L., Carette, Jan E., Bertozzi, Carolyn R., Wilen, Craig B., Satpathy, Ansuman T.
Published in Cell (29.04.2021)
Published in Cell (29.04.2021)
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Genome-wide CRISPR screens of T cell exhaustion identify chromatin remodeling factors that limit T cell persistence
Belk, Julia A., Yao, Winnie, Ly, Nghi, Freitas, Katherine A., Chen, Yan-Ting, Shi, Quanming, Valencia, Alfredo M., Shifrut, Eric, Kale, Nupura, Yost, Kathryn E., Duffy, Connor V., Daniel, Bence, Hwee, Madeline A., Miao, Zhuang, Ashworth, Alan, Mackall, Crystal L., Marson, Alexander, Carnevale, Julia, Vardhana, Santosh A., Satpathy, Ansuman T.
Published in Cancer cell (11.07.2022)
Published in Cancer cell (11.07.2022)
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Affinity-Restricted Memory B Cells Dominate Recall Responses to Heterologous Flaviviruses
Wong, Rachel, Belk, Julia A., Govero, Jennifer, Uhrlaub, Jennifer L., Reinartz, Dakota, Zhao, Haiyan, Errico, John M., D’Souza, Lucas, Ripperger, Tyler J., Nikolich-Zugich, Janko, Shlomchik, Mark J., Satpathy, Ansuman T., Fremont, Daved H., Diamond, Michael S., Bhattacharya, Deepta
Published in Immunity (Cambridge, Mass.) (17.11.2020)
Published in Immunity (Cambridge, Mass.) (17.11.2020)
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Lymph node colonization induces tumor-immune tolerance to promote distant metastasis
Reticker-Flynn, Nathan E., Zhang, Weiruo, Belk, Julia A., Basto, Pamela A., Escalante, Nichole K., Pilarowski, Genay O.W., Bejnood, Alborz, Martins, Maria M., Kenkel, Justin A., Linde, Ian L., Bagchi, Sreya, Yuan, Robert, Chang, Serena, Spitzer, Matthew H., Carmi, Yaron, Cheng, Jiahan, Tolentino, Lorna L., Choi, Okmi, Wu, Nancy, Kong, Christina S., Gentles, Andrew J., Sunwoo, John B., Satpathy, Ansuman T., Plevritis, Sylvia K., Engleman, Edgar G.
Published in Cell (26.05.2022)
Published in Cell (26.05.2022)
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Divergent clonal differentiation trajectories of T cell exhaustion
Daniel, Bence, Yost, Kathryn E, Hsiung, Sunnie, Sandor, Katalin, Xia, Yu, Qi, Yanyan, Hiam-Galvez, Kamir J, Black, Mollie, J Raposo, Colin, Shi, Quanming, Meier, Stefanie L, Belk, Julia A, Giles, Josephine R, Wherry, E John, Chang, Howard Y, Egawa, Takeshi, Satpathy, Ansuman T
Published in Nature immunology (01.11.2022)
Published in Nature immunology (01.11.2022)
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Journal Article
ecDNA hubs drive cooperative intermolecular oncogene expression
Hung, King L, Yost, Kathryn E, Xie, Liangqi, Shi, Quanming, Helmsauer, Konstantin, Luebeck, Jens, Schöpflin, Robert, Lange, Joshua T, Chamorro González, Rocío, Weiser, Natasha E, Chen, Celine, Valieva, Maria E, Wong, Ivy Tsz-Lo, Wu, Sihan, Dehkordi, Siavash R, Duffy, Connor V, Kraft, Katerina, Tang, Jun, Belk, Julia A, Rose, John C, Corces, M Ryan, Granja, Jeffrey M, Li, Rui, Rajkumar, Utkrisht, Friedlein, Jordan, Bagchi, Anindya, Satpathy, Ansuman T, Tjian, Robert, Mundlos, Stefan, Bafna, Vineet, Henssen, Anton G, Mischel, Paul S, Liu, Zhe, Chang, Howard Y
Published in Nature (London) (23.12.2021)
Published in Nature (London) (23.12.2021)
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Journal Article
Enhanced T cell effector activity by targeting the Mediator kinase module
Freitas, Katherine A, Belk, Julia A, Sotillo, Elena, Quinn, Patrick J, Ramello, Maria C, Malipatlolla, Meena, Daniel, Bence, Sandor, Katalin, Klysz, Dorota, Bjelajac, Jeremy, Xu, Peng, Burdsall, Kylie A, Tieu, Victor, Duong, Vandon T, Donovan, Micah G, Weber, Evan W, Chang, Howard Y, Majzner, Robbie G, Espinosa, Joaquin M, Satpathy, Ansuman T, Mackall, Crystal L
Published in Science (American Association for the Advancement of Science) (11.11.2022)
Published in Science (American Association for the Advancement of Science) (11.11.2022)
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Journal Article
Xist ribonucleoproteins promote female sex-biased autoimmunity
Dou, Diana R., Zhao, Yanding, Belk, Julia A., Zhao, Yang, Casey, Kerriann M., Chen, Derek C., Li, Rui, Yu, Bingfei, Srinivasan, Suhas, Abe, Brian T., Kraft, Katerina, Hellström, Ceke, Sjöberg, Ronald, Chang, Sarah, Feng, Allan, Goldman, Daniel W., Shah, Ami A., Petri, Michelle, Chung, Lorinda S., Fiorentino, David F., Lundberg, Emma K., Wutz, Anton, Utz, Paul J., Chang, Howard Y.
Published in Cell (01.02.2024)
Published in Cell (01.02.2024)
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Engineered cell entry links receptor biology with single-cell genomics
Yu, Bingfei, Shi, Quanming, Belk, Julia A., Yost, Kathryn E., Parker, Kevin R., Li, Rui, Liu, Betty B., Huang, Huang, Lingwood, Daniel, Greenleaf, William J., Davis, Mark M., Satpathy, Ansuman T., Chang, Howard Y.
Published in Cell (22.12.2022)
Published in Cell (22.12.2022)
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Journal Article
Bidirectional epigenetic editing reveals hierarchies in gene regulation
Pacalin, Naomi M, Steinhart, Zachary, Shi, Quanming, Belk, Julia A, Dorovskyi, Dmytro, Kraft, Katerina, Parker, Kevin R, Shy, Brian R, Marson, Alexander, Chang, Howard Y
Published in Nature biotechnology (17.05.2024)
Published in Nature biotechnology (17.05.2024)
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Journal Article
Author Correction: Engineering circular RNA for enhanced protein production
Chen, Robert, Wang, Sean K, Belk, Julia A, Amaya, Laura, Li, Zhijian, Cardenas, Angel, Abe, Brian T, Chen, Chun-Kan, Wender, Paul A, Chang, Howard Y
Published in Nature biotechnology (01.02.2023)
Published in Nature biotechnology (01.02.2023)
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Journal Article
A human mutation in STAT3 promotes type 1 diabetes through a defect in CD8+ T cell tolerance
Warshauer, Jeremy T, Belk, Julia A, Chan, Alice Y, Wang, Jiaxi, Gupta, Alexander R, Shi, Quanming, Skartsis, Nikolaos, Peng, Yani, Phipps, Jonah D, Acenas, Dante, Smith, Jennifer A, Tamaki, Stanley J, Tang, Qizhi, Gardner, James M, Satpathy, Ansuman T, Anderson, Mark S
Published in The Journal of experimental medicine (02.08.2021)
Published in The Journal of experimental medicine (02.08.2021)
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Journal Article
Genome-wide bidirectional CRISPR screens identify mucins as host factors modulating SARS-CoV-2 infection
Biering, Scott B., Sarnik, Sylvia A., Wang, Eleanor, Zengel, James R., Leist, Sarah R., Schäfer, Alexandra, Sathyan, Varun, Hawkins, Padraig, Okuda, Kenichi, Tau, Cyrus, Jangid, Aditya R., Duffy, Connor V., Wei, Jin, Gilmore, Rodney C., Alfajaro, Mia Madel, Strine, Madison S., Nguyenla, Xammy, Van Dis, Erik, Catamura, Carmelle, Yamashiro, Livia H., Belk, Julia A., Begeman, Adam, Stark, Jessica C., Shon, D. Judy, Fox, Douglas M., Ezzatpour, Shahrzad, Huang, Emily, Olegario, Nico, Rustagi, Arjun, Volmer, Allison S., Livraghi-Butrico, Alessandra, Wehri, Eddie, Behringer, Richard R., Cheon, Dong-Joo, Schaletzky, Julia, Aguilar, Hector C., Puschnik, Andreas S., Button, Brian, Pinsky, Benjamin A., Blish, Catherine A., Baric, Ralph S., O’Neal, Wanda K., Bertozzi, Carolyn R., Wilen, Craig B., Boucher, Richard C., Carette, Jan E., Stanley, Sarah A., Harris, Eva, Konermann, Silvana, Hsu, Patrick D.
Published in Nature genetics (01.08.2022)
Published in Nature genetics (01.08.2022)
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Clonal hematopoiesis is associated with protection from Alzheimer's disease
Bouzid, Hind, Belk, Julia A, Jan, Max, Qi, Yanyan, Sarnowski, Chloé, Wirth, Sara, Ma, Lisa, Chrostek, Matthew R, Ahmad, Herra, Nachun, Daniel, Yao, Winnie, Beiser, Alexa, Bick, Alexander G, Bis, Joshua C, Fornage, Myriam, Longstreth, Jr, William T, Lopez, Oscar L, Natarajan, Pradeep, Psaty, Bruce M, Satizabal, Claudia L, Weinstock, Joshua, Larson, Eric B, Crane, Paul K, Keene, C Dirk, Seshadri, Sudha, Satpathy, Ansuman T, Montine, Thomas J, Jaiswal, Siddhartha
Published in Nature medicine (01.07.2023)
Published in Nature medicine (01.07.2023)
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Journal Article
Leveraging nonstructural data to predict structures and affinities of protein-ligand complexes
Paggi, Joseph M, Belk, Julia A, Hollingsworth, Scott A, Villanueva, Nicolas, Powers, Alexander S, Clark, Mary J, Chemparathy, Augustine G, Tynan, Jonathan E, Lau, Thomas K, Sunahara, Roger K, Dror, Ron O
Published in Proceedings of the National Academy of Sciences - PNAS (21.12.2021)
Published in Proceedings of the National Academy of Sciences - PNAS (21.12.2021)
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Clonal inactivation of TERT impairs stem cell competition
Hasegawa, Kazuteru, Zhao, Yang, Garbuzov, Alina, Corces, M. Ryan, Neuhöfer, Patrick, Gillespie, Victoria M., Cheung, Peggie, Belk, Julia A., Huang, Yung-Hsin, Wei, Yuning, Chen, Lu, Chang, Howard Y., Artandi, Steven E.
Published in Nature (London) (01.08.2024)
Published in Nature (London) (01.08.2024)
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