Minimum information about clinical artificial intelligence modeling: the MI-CLAIM checklist
Norgeot, Beau, Quer, Giorgio, Beaulieu-Jones, Brett K, Torkamani, Ali, Dias, Raquel, Gianfrancesco, Milena, Arnaout, Rima, Kohane, Isaac S, Saria, Suchi, Topol, Eric, Obermeyer, Ziad, Yu, Bin, Butte, Atul J
Published in Nature medicine (01.09.2020)
Published in Nature medicine (01.09.2020)
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Journal Article
Machine learning for patient risk stratification: standing on, or looking over, the shoulders of clinicians?
Beaulieu-Jones, Brett K, Yuan, William, Brat, Gabriel A, Beam, Andrew L, Weber, Griffin, Ruffin, Marshall, Kohane, Isaac S
Published in NPJ digital medicine (30.03.2021)
Published in NPJ digital medicine (30.03.2021)
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Journal Article
Generate Analysis-Ready Data for Real-world Evidence: Tutorial for Harnessing Electronic Health Records With Advanced Informatic Technologies
Hou, Jue, Zhao, Rachel, Gronsbell, Jessica, Lin, Yucong, Bonzel, Clara-Lea, Zeng, Qingyi, Zhang, Sinian, Beaulieu-Jones, Brett K, Weber, Griffin M, Jemielita, Thomas, Wan, Shuyan Sabrina, Hong, Chuan, Cai, Tianrun, Wen, Jun, Ayakulangara Panickan, Vidul, Liaw, Kai-Li, Liao, Katherine, Cai, Tianxi
Published in Journal of medical Internet research (25.05.2023)
Published in Journal of medical Internet research (25.05.2023)
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Journal Article
Multi-center retrospective cohort study applying deep learning to electrocardiograms to identify left heart valvular dysfunction
Vaid, Akhil, Argulian, Edgar, Lerakis, Stamatios, Beaulieu-Jones, Brett K, Krittanawong, Chayakrit, Klang, Eyal, Lampert, Joshua, Reddy, Vivek Y, Narula, Jagat, Nadkarni, Girish N, Glicksberg, Benjamin S
Published in Communications medicine (14.02.2023)
Published in Communications medicine (14.02.2023)
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Journal Article
Disease progression strikingly differs in research and real-world Parkinson's populations
Beaulieu-Jones, Brett K, Frau, Francesca, Bozzi, Sylvie, Chandross, Karen J, Peterschmitt, M Judith, Cohen, Caroline, Coulovrat, Catherine, Kumar, Dinesh, Kruger, Mark J, Lipnick, Scott L, Fitzsimmons, Lane, Kohane, Isaac S, Scherzer, Clemens R
Published in NPJ Parkinson's Disease (13.03.2024)
Published in NPJ Parkinson's Disease (13.03.2024)
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Journal Article
Semi-supervised learning of the electronic health record for phenotype stratification
Beaulieu-Jones, Brett K., Greene, Casey S.
Published in Journal of biomedical informatics (01.12.2016)
Published in Journal of biomedical informatics (01.12.2016)
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Journal Article
Privacy-Preserving Generative Deep Neural Networks Support Clinical Data Sharing
Beaulieu-Jones, Brett K, Wu, Zhiwei Steven, Williams, Chris, Lee, Ran, Bhavnani, Sanjeev P, Byrd, James Brian, Greene, Casey S
Published in Circulation Cardiovascular quality and outcomes (01.07.2019)
Published in Circulation Cardiovascular quality and outcomes (01.07.2019)
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Journal Article
Mapping Patient Trajectories using Longitudinal Extraction and Deep Learning in the MIMIC-III Critical Care Database
Beaulieu-Jones, Brett K, Orzechowski, Patryk, Moore, Jason H
Published in Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2018)
Published in Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2018)
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Journal Article
Validation of an internationally derived patient severity phenotype to support COVID-19 analytics from electronic health record data
Klann, Jeffrey G, Estiri, Hossein, Weber, Griffin M, Moal, Bertrand, Avillach, Paul, Hong, Chuan, Tan, Amelia L M, Beaulieu-Jones, Brett K, Castro, Victor, Maulhardt, Thomas, Geva, Alon, Malovini, Alberto, South, Andrew M, Visweswaran, Shyam, Morris, Michele, Samayamuthu, Malarkodi J, Omenn, Gilbert S, Ngiam, Kee Yuan, Mandl, Kenneth D, Boeker, Martin, Olson, Karen L, Mowery, Danielle L, Follett, Robert W, Hanauer, David A, Bellazzi, Riccardo, Moore, Jason H, Loh, Ne-Hooi Will, Bell, Douglas S, Wagholikar, Kavishwar B, Chiovato, Luca, Tibollo, Valentina, Rieg, Siegbert, Li, Anthony L L J, Jouhet, Vianney, Schriver, Emily, Xia, Zongqi, Hutch, Meghan, Luo, Yuan, Kohane, Isaac S, Brat, Gabriel A, Murphy, Shawn N
Published in Journal of the American Medical Informatics Association (14.07.2021)
Published in Journal of the American Medical Informatics Association (14.07.2021)
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Journal Article
Web Resource
Severity of Epilepsy and Response to Antiseizure Medications in Individuals With Multiple Sclerosis: Analysis of a Real-World Dataset
Villamar, Mauricio F., Sarkis, Rani A., Pennell, Page, Kohane, Isaac, Beaulieu-Jones, Brett K.
Published in Neurology. Clinical practice (01.08.2022)
Published in Neurology. Clinical practice (01.08.2022)
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Journal Article
Predicting seizure recurrence after an initial seizure-like episode from routine clinical notes using large language models: a retrospective cohort study
Beaulieu-Jones, Brett K, Villamar, Mauricio F, Scordis, Phil, Bartmann, Ana Paula, Ali, Waqar, Wissel, Benjamin D, Alsentzer, Emily, de Jong, Johann, Patra, Arijit, Kohane, Isaac
Published in The Lancet. Digital health (01.12.2023)
Published in The Lancet. Digital health (01.12.2023)
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Journal Article
Illustrating potential effects of alternate control populations on real-world evidence-based statistical analyses
Huang, Yidi, Yuan, William, Kohane, Isaac S, Beaulieu-Jones, Brett K
Published in JAMIA open (01.04.2021)
Published in JAMIA open (01.04.2021)
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Journal Article
Opportunities and obstacles for deep learning in biology and medicine
Ching, Travers, Himmelstein, Daniel S., Beaulieu-Jones, Brett K., Kalinin, Alexandr A., Do, Brian T., Way, Gregory P., Ferrero, Enrico, Agapow, Paul-Michael, Zietz, Michael, Hoffman, Michael M., Xie, Wei, Rosen, Gail L., Lengerich, Benjamin J., Israeli, Johnny, Lanchantin, Jack, Woloszynek, Stephen, Carpenter, Anne E., Shrikumar, Avanti, Xu, Jinbo, Cofer, Evan M., Lavender, Christopher A., Turaga, Srinivas C., Alexandari, Amr M., Lu, Zhiyong, Harris, David J., DeCaprio, Dave, Qi, Yanjun, Kundaje, Anshul, Peng, Yifan, Wiley, Laura K., Segler, Marwin H. S., Boca, Simina M., Swamidass, S. Joshua, Huang, Austin, Gitter, Anthony, Greene, Casey S.
Published in Journal of the Royal Society interface (01.04.2018)
Published in Journal of the Royal Society interface (01.04.2018)
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Journal Article
Multinational Prevalence of Neurological Phenotypes in Patients Hospitalized with COVID-19
Le, Trang T, Gutiérrez-Sacristán, Alba, Son, Jiyeon, Hong, Chuan, South, Andrew M, Beaulieu-Jones, Brett K, Loh, Ne Hooi Will, Luo, Yuan, Morris, Michele, Ngiam, Kee Yuan, Patel, Lav P, Samayamuthu, Malarkodi J, Schriver, Emily, Tan, Amelia Lm, Moore, Jason, Cai, Tianxi, Omenn, Gilbert S, Avillach, Paul, Kohane, Isaac S, Visweswaran, Shyam, Mowery, Danielle L, Xia, Zongqi
Published in medRxiv : the preprint server for health sciences (29.01.2021)
Published in medRxiv : the preprint server for health sciences (29.01.2021)
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