Bacteria, phages and pigs: the effects of in-feed antibiotics on the microbiome at different gut locations
Looft, Torey, Allen, Heather K, Cantarel, Brandi L, Levine, Uri Y, Bayles, Darrell O, Alt, David P, Henrissat, Bernard, Stanton, Thaddeus B
Published in The ISME Journal (01.08.2014)
Published in The ISME Journal (01.08.2014)
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Journal Article
Improved DNA Amplification of the Hallmark IS 900 Element in Mycobacterium avium subsp. paratuberculosis : a Reexamination Based on Whole-Genome Sequence Analysis
Bannantine, John P, Stabel, Judith R, Bayles, Darrell O, Biet, Franck
Published in Applied and environmental microbiology (28.02.2023)
Published in Applied and environmental microbiology (28.02.2023)
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Journal Article
In-feed antibiotic effects on the swine intestinal microbiome
Looft, Torey, Johnson, Timothy A., Allen, Heather K., Bayles, Darrell O., Alt, David P., Stedtfeld, Robert D., Sul, Woo Jun, Stedtfeld, Tiffany M., Chai, Benli, Cole, James R., Hashsham, Syed A., Tiedje, James M., Stanton, Thad B.
Published in Proceedings of the National Academy of Sciences - PNAS (31.01.2012)
Published in Proceedings of the National Academy of Sciences - PNAS (31.01.2012)
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Journal Article
Improved DNA Amplification of the Hallmark IS900 Element in Mycobacterium avium subsp. paratuberculosis: a Reexamination Based on Whole-Genome Sequence Analysis
Bannantine, John P., Stabel, Judith R., Bayles, Darrell O., Biet, Franck
Published in Applied and environmental microbiology (28.02.2023)
Published in Applied and environmental microbiology (28.02.2023)
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Journal Article
A pseudomolecule assembly of the Rocky Mountain elk genome
Masonbrink, Rick E, Alt, David, Bayles, Darrell O, Boggiatto, Paola, Edwards, William, Tatum, Fred, Williams, Jeffrey, Wilson-Welder, Jennifer, Zimin, Aleksey, Severin, Andrew, Olsen, Steven
Published in PloS one (28.04.2021)
Published in PloS one (28.04.2021)
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Journal Article
Severity of bovine tuberculosis is associated with innate immune-biased transcriptional signatures of whole blood in early weeks after experimental Mycobacterium bovis infection
Wiarda, Jayne E, Boggiatto, Paola M, Bayles, Darrell O, Waters, W Ray, Thacker, Tyler C, Palmer, Mitchell V
Published in PloS one (09.11.2020)
Published in PloS one (09.11.2020)
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Journal Article
Transcriptomic differences noted in Glaesserella parasuis between growth in broth and on agar
Hau, Samantha J, Mou, Kathy T, Bayles, Darrell O, Brockmeier, Susan L
Published in PloS one (06.08.2019)
Published in PloS one (06.08.2019)
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Journal Article
Comparison of Two Multilocus Sequence Typing Schemes for Mycoplasma bovis and Revision of the PubMLST Reference Method
Register, Karen B, Lysnyansky, Inna, Jelinski, Murray D, Boatwright, William D, Waldner, Matthew, Bayles, Darrell O, Pilo, Paola, Alt, David P
Published in Journal of clinical microbiology (26.05.2020)
Published in Journal of clinical microbiology (26.05.2020)
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Journal Article
Identification of BVDV2b and 2c subgenotypes in the United States: Genetic and antigenic characterization
Neill, John D., Workman, Aspen M., Hesse, Richard, Bai, Jianfa, Porter, Elizabeth Poulsen, Meadors, Barbara, Anderson, Joe, Bayles, Darrell O., Falkenberg, Shollie M.
Published in Virology (New York, N.Y.) (01.02.2019)
Published in Virology (New York, N.Y.) (01.02.2019)
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Journal Article
Emerging Infectious Disease Implications of Invasive Mammalian Species: The Greater White-Toothed Shrew (Crocidura russula) Is Associated With a Novel Serovar of Pathogenic Leptospira in Ireland
Nally, Jarlath E, Arent, Zbigniew, Bayles, Darrell O, Hornsby, Richard L, Gilmore, Colm, Regan, Siobhan, McDevitt, Allan D, Yearsley, Jon, Fanning, Séamus, McMahon, Barry J
Published in PLoS neglected tropical diseases (09.12.2016)
Published in PLoS neglected tropical diseases (09.12.2016)
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Journal Article
Concurrent colonization of rodent kidneys with multiple species and serogroups of pathogenic Leptospira
Hamond, Camila, LeCount, Karen, Browne, A. Springer, Anderson, Tammy, Stuber, Tod, Hicks, Jessica, Camp, Patrick, Fernandes, Luis G. V., van der Linden, Hans, Goris, Marga G. A., Bayles, Darrell O., Schlater, Linda K., Nally, Jarlath E.
Published in Applied and environmental microbiology (01.10.2023)
Published in Applied and environmental microbiology (01.10.2023)
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Journal Article
Virulence and draft genome sequence overview of multiple strains of the swine pathogen Haemophilus parasuis
Brockmeier, Susan L, Register, Karen B, Kuehn, Joanna S, Nicholson, Tracy L, Loving, Crystal L, Bayles, Darrell O, Shore, Sarah M, Phillips, Gregory J
Published in PloS one (19.08.2014)
Published in PloS one (19.08.2014)
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Journal Article
Antibiotics in feed induce prophages in swine fecal microbiomes
Allen, Heather K, Looft, Torey, Bayles, Darrell O, Humphrey, Samuel, Levine, Uri Y, Alt, David, Stanton, Thaddeus B
Published in mBio (2011)
Published in mBio (2011)
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Journal Article
Function and Phylogeny of Bacterial Butyryl Coenzyme A:Acetate Transferases and Their Diversity in the Proximal Colon of Swine
Trachsel, Julian, Bayles, Darrell O, Looft, Torey, Levine, Uri Y, Allen, Heather K
Published in Applied and environmental microbiology (15.11.2016)
Published in Applied and environmental microbiology (15.11.2016)
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Journal Article