BioNetGen 2.2: advances in rule-based modeling
Harris, Leonard A, Hogg, Justin S, Tapia, José-Juan, Sekar, John A P, Gupta, Sanjana, Korsunsky, Ilya, Arora, Arshi, Barua, Dipak, Sheehan, Robert P, Faeder, James R
Published in Bioinformatics (Oxford, England) (01.11.2016)
Published in Bioinformatics (Oxford, England) (01.11.2016)
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Journal Article
Motifs enable communication efficiency and fault-tolerance in transcriptional networks
Roy, Satyaki, Ghosh, Preetam, Barua, Dipak, Das, Sajal K
Published in Scientific reports (15.06.2020)
Published in Scientific reports (15.06.2020)
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Journal Article
Exploring higher-order EGFR oligomerisation and phosphorylation--a combined experimental and theoretical approach
Kozer, Noga, Barua, Dipak, Orchard, Suzanne, Nice, Eduoard C, Burgess, Antony W, Hlavacek, William S, Clayton, Andrew H A
Published in Molecular bioSystems (01.01.2013)
Published in Molecular bioSystems (01.01.2013)
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Journal Article
Modeling cell line-specific recruitment of signaling proteins to the insulin-like growth factor 1 receptor
Erickson, Keesha E, Rukhlenko, Oleksii S, Shahinuzzaman, Md, Slavkova, Kalina P, Lin, Yen Ting, Suderman, Ryan, Stites, Edward C, Anghel, Marian, Posner, Richard G, Barua, Dipak, Kholodenko, Boris N, Hlavacek, William S
Published in PLoS computational biology (01.01.2019)
Published in PLoS computational biology (01.01.2019)
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Journal Article
A spatio-temporal model reveals self-limiting FcɛRI cross-linking by multivalent antigens
Shahinuzzaman, Md, Khetan, Jawahar, Barua, Dipak
Published in Royal Society open science (26.09.2018)
Published in Royal Society open science (26.09.2018)
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Journal Article
Single-cell measurements of IgE-mediated FcεRI signaling using an integrated microfluidic platform
Liu, Yanli, Barua, Dipak, Liu, Peng, Wilson, Bridget S, Oliver, Janet M, Hlavacek, William S, Singh, Anup K
Published in PloS one (27.03.2013)
Published in PloS one (27.03.2013)
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Journal Article
Computational model for autophagic vesicle dynamics in single cells
Martin, Katie R., Barua, Dipak, Kauffman, Audra L., Westrate, Laura M., Posner, Richard G., Hlavacek, William S., MacKeigan, Jeffrey P.
Published in Autophagy (01.01.2013)
Published in Autophagy (01.01.2013)
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Journal Article
Metal Oxide Thin Films Deposited from Metal Organic Precursors in Supercritical CO2 Solutions
Gougousi, Theodosia, Barua, Dipak, Young, Erin D, Parsons, Gregory N
Published in Chemistry of materials (04.10.2005)
Published in Chemistry of materials (04.10.2005)
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Journal Article