Ecological patterns of seed microbiome diversity, transmission, and assembly
Shade, Ashley, Jacques, Marie-Agnès, Barret, Matthieu
Published in Current opinion in microbiology (01.06.2017)
Published in Current opinion in microbiology (01.06.2017)
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Journal Article
rpoB, a promising marker for analyzing the diversity of bacterial communities by amplicon sequencing
Ogier, Jean-Claude, Pagès, Sylvie, Galan, Maxime, Barret, Matthieu, Gaudriault, Sophie
Published in BMC microbiology (29.07.2019)
Published in BMC microbiology (29.07.2019)
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Journal Article
Emergence shapes the structure of the seed microbiota
Barret, Matthieu, Briand, Martial, Bonneau, Sophie, Préveaux, Anne, Valière, Sophie, Bouchez, Olivier, Hunault, Gilles, Simoneau, Philippe, Jacquesa, Marie-Agnès
Published in Applied and Environmental Microbiology (01.02.2015)
Published in Applied and Environmental Microbiology (01.02.2015)
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Journal Article
Insect pollination: an ecological process involved in the assembly of the seed microbiota
Prado, Alberto, Marolleau, Brice, Vaissière, Bernard E, Barret, Matthieu, Torres-Cortes, Gloria
Published in Scientific reports (27.02.2020)
Published in Scientific reports (27.02.2020)
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Journal Article
Terroir is a key driver of seed-associated microbial assemblages
Klaedtke, Stephanie, Jacques, Marie-Agnès, Raggi, Lorenzo, Préveaux, Anne, Bonneau, Sophie, Negri, Valeria, Chable, Véronique, Barret, Matthieu
Published in Environmental microbiology (01.06.2016)
Published in Environmental microbiology (01.06.2016)
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Journal Article
Web Resource
Differential dynamics of microbial community networks help identify microorganisms interacting with residue-borne pathogens: the case of Zymoseptoria tritici in wheat
Kerdraon, Lydie, Barret, Matthieu, Laval, Valérie, Suffert, Frédéric
Published in Microbiome (30.08.2019)
Published in Microbiome (30.08.2019)
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Journal Article
Temporal dynamics of bacterial communities during seed development and maturation
Chesneau, Guillaume, Torres-Cortes, Gloria, Briand, Martial, Darrasse, Armelle, Preveaux, Anne, Marais, Coralie, Jacques, Marie-Agnès, Shade, Ashley, Barret, Matthieu
Published in FEMS microbiology ecology (01.12.2020)
Published in FEMS microbiology ecology (01.12.2020)
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Journal Article
Characterization of relative abundance of lactic acid bacteria species in French organic sourdough by cultural, qPCR and MiSeq high-throughput sequencing methods
Michel, Elisa, Monfort, Clarisse, Deffrasnes, Marion, Guezenec, Stéphane, Lhomme, Emilie, Barret, Matthieu, Sicard, Delphine, Dousset, Xavier, Onno, Bernard
Published in International journal of food microbiology (19.12.2016)
Published in International journal of food microbiology (19.12.2016)
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Journal Article
Single Seed Microbiota: Assembly and Transmission from Parent Plant to Seedling
Chesneau, Guillaume, Laroche, Béatrice, Préveaux, Anne, Marais, Coralie, Briand, Martial, Marolleau, Brice, Simonin, Marie, Barret, Matthieu
Published in mBio (20.12.2022)
Published in mBio (20.12.2022)
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Journal Article
Ancestral acquisitions, gene flow and multiple evolutionary trajectories of the type three secretion system and effectors in Xanthomonas plant pathogens
Merda, Déborah, Briand, Martial, Bosis, Eran, Rousseau, Céline, Portier, Perrine, Barret, Matthieu, Jacques, Marie‐Agnès, Fischer‐Le Saux, Marion
Published in Molecular ecology (01.11.2017)
Published in Molecular ecology (01.11.2017)
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Journal Article
In situ relationships between microbiota and potential pathobiota in Arabidopsis thaliana
Bartoli, Claudia, Frachon, Léa, Barret, Matthieu, Rigal, Mylène, Huard-Chauveau, Carine, Mayjonade, Baptiste, Zanchetta, Catherine, Bouchez, Olivier, Roby, Dominique, Carrère, Sébastien, Roux, Fabrice
Published in The ISME Journal (01.08.2018)
Published in The ISME Journal (01.08.2018)
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Journal Article
Functional Microbial Features Driving Community Assembly During Seed Germination and Emergence
Torres-Cortés, Gloria, Bonneau, Sophie, Bouchez, Olivier, Genthon, Clémence, Briand, Martial, Jacques, Marie-Agnès, Barret, Matthieu
Published in Frontiers in plant science (29.06.2018)
Published in Frontiers in plant science (29.06.2018)
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Journal Article
Transmission of Seed and Soil Microbiota to Seedling
Rochefort, Aude, Simonin, Marie, Marais, Coralie, Guillerm-Erckelboudt, Anne-Yvonne, Barret, Matthieu, Sarniguet, Alain
Published in mSystems (29.06.2021)
Published in mSystems (29.06.2021)
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Journal Article
Honey bees change the microbiota of pollen
Prado, Alberto, Barret, Matthieu, Vaissière, Bernard E., Torres-Cortes, Gloria
Published in Botanical sciences (01.01.2023)
Published in Botanical sciences (01.01.2023)
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Journal Article
Defining Composition and Function of the Rhizosphere Microbiota of Barley Genotypes Exposed to Growth-Limiting Nitrogen Supplies
Alegria Terrazas, Rodrigo, Robertson-Albertyn, Senga, Corral, Aileen Mary, Escudero-Martinez, Carmen, Kapadia, Rumana, Balbirnie-Cumming, Katharin, Morris, Jenny, Hedley, Pete E, Barret, Matthieu, Torres-Cortes, Gloria, Paterson, Eric, Baggs, Elizabeth M, Abbott, James, Bulgarelli, Davide
Published in mSystems (20.12.2022)
Published in mSystems (20.12.2022)
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Journal Article
Genome sequence reveals that Pseudomonas fluorescens F113 possesses a large and diverse array of systems for rhizosphere function and host interaction
Redondo-Nieto, Miguel, Barret, Matthieu, Morrissey, John, Germaine, Kieran, Martínez-Granero, Francisco, Barahona, Emma, Navazo, Ana, Sánchez-Contreras, María, Moynihan, Jennifer A, Muriel, Candela, Dowling, David, O'Gara, Fergal, Martín, Marta, Rivilla, Rafael
Published in BMC genomics (25.01.2013)
Published in BMC genomics (25.01.2013)
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Journal Article
Subtilomycin: a new lantibiotic from Bacillus subtilis strain MMA7 isolated from the marine sponge Haliclona simulans
Phelan, Robert W, Barret, Matthieu, Cotter, Paul D, O'Connor, Paula M, Chen, Rui, Morrissey, John P, Dobson, Alan D W, O'Gara, Fergal, Barbosa, Teresa M
Published in Marine drugs (03.06.2013)
Published in Marine drugs (03.06.2013)
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Journal Article
Genome Sequence of the Biocontrol Strain Pseudomonas fluorescens F113
Redondo-Nieto, Miguel, Barret, Matthieu, Morrisey, John P, Germaine, Kieran, Martínez-Granero, Francisco, Barahona, Emma, Navazo, Ana, Sánchez-Contreras, María, Moynihan, Jennifer A, Giddens, Stephen R, Coppoolse, Eric R, Muriel, Candela, Stiekema, Willem J, Rainey, Paul B, Dowling, David, O'Gara, Fergal, Martín, Marta, Rivilla, Rafael
Published in Journal of Bacteriology (01.03.2012)
Published in Journal of Bacteriology (01.03.2012)
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Journal Article
Influence of Environment and Host Plant Genotype on the Structure and Diversity of the Brassica napus Seed Microbiota
Rochefort, Aude, Briand, Martial, Marais, Coralie, Wagner, Marie-Hélène, Laperche, Anne, Vallée, Patrick, Barret, Matthieu, Sarniguet, Alain
Published in Phytobiomes journal (01.01.2019)
Published in Phytobiomes journal (01.01.2019)
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Journal Article