A Multitype Birth–Death Model for Bayesian Inference of Lineage-Specific Birth and Death Rates
BARIDO-SOTTANI, JOËLLE, VAUGHAN, TIMOTHY G., STADLER, TANJA
Published in Systematic biology (01.09.2020)
Published in Systematic biology (01.09.2020)
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Journal Article
RevGadgets: An R package for visualizing Bayesian phylogenetic analyses from RevBayes
Tribble, Carrie M., Freyman, William A., Landis, Michael J., Lim, Jun Ying, Barido‐Sottani, Joellë, Kopperud, Bjørn Tore, Hӧhna, Sebastian, May, Michael R.
Published in Methods in ecology and evolution (01.02.2022)
Published in Methods in ecology and evolution (01.02.2022)
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Journal Article
Putting the F into FBD analysis: tree constraints or morphological data?
Barido‐Sottani, Joëlle, Pohle, Alexander, De Baets, Kenneth, Murdock, Duncan, Warnock, Rachel C. M.
Published in Palaeontology (01.11.2023)
Published in Palaeontology (01.11.2023)
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Journal Article
FossilSim: An r package for simulating fossil occurrence data under mechanistic models of preservation and recovery
Barido‐Sottani, Joëlle, Pett, Walker, O’Reilly, Joseph E., Warnock, Rachel C. M., Hsiang Liow, Lee
Published in Methods in ecology and evolution (01.06.2019)
Published in Methods in ecology and evolution (01.06.2019)
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Journal Article
Robust Phylodynamic Analysis of Genetic Sequencing Data from Structured Populations
Scire, Jérémie, Barido-Sottani, Joëlle, Kühnert, Denise, Vaughan, Timothy G, Stadler, Tanja
Published in Viruses (27.07.2022)
Published in Viruses (27.07.2022)
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Journal Article
Measuring similarity between gene interaction profiles
Barido-Sottani, Joëlle, Chapman, Samuel D, Kosman, Evsey, Mushegian, Arcady R
Published in BMC bioinformatics (22.08.2019)
Published in BMC bioinformatics (22.08.2019)
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Journal Article
Ignoring Fossil Age Uncertainty Leads to Inaccurate Topology and Divergence Time Estimates in Time Calibrated Tree Inference
Barido-Sottani, Joëlle, van Tiel, Nina M. A., Hopkins, Melanie J., Wright, David F., Stadler, Tanja, Warnock, Rachel C. M.
Published in Frontiers in ecology and evolution (26.06.2020)
Published in Frontiers in ecology and evolution (26.06.2020)
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Journal Article
BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis
Bouckaert, Remco, Vaughan, Timothy G, Barido-Sottani, Joëlle, Duchêne, Sebastián, Fourment, Mathieu, Gavryushkina, Alexandra, Heled, Joseph, Jones, Graham, Kühnert, Denise, De Maio, Nicola, Matschiner, Michael, Mendes, Fábio K, Müller, Nicola F, Ogilvie, Huw A, du Plessis, Louis, Popinga, Alex, Rambaut, Andrew, Rasmussen, David, Siveroni, Igor, Suchard, Marc A, Wu, Chieh-Hsi, Xie, Dong, Zhang, Chi, Stadler, Tanja, Drummond, Alexei J
Published in PLoS computational biology (08.04.2019)
Published in PLoS computational biology (08.04.2019)
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Journal Article
Ignoring stratigraphic age uncertainty leads to erroneous estimates of species divergence times under the fossilized birth-death process
Barido-Sottani, Joëlle, Aguirre-Fernández, Gabriel, Hopkins, Melanie J, Stadler, Tanja, Warnock, Rachel
Published in Proceedings of the Royal Society. B, Biological sciences (15.05.2019)
Published in Proceedings of the Royal Society. B, Biological sciences (15.05.2019)
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Journal Article
The Occurrence Birth-Death Process for combined-evidence analysis in macroevolution and epidemiology
Andréoletti, Jérémy, Zwaans, Antoine, Warnock, Rachel C M, Aguirre-Fernández, Gabriel, Barido-Sottani, Joëlle, Gupta, Ankit, Stadler, Tanja, Manceau, Marc
Published in Systematic biology (12.10.2022)
Published in Systematic biology (12.10.2022)
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Journal Article
Taming the BEAST—A Community Teaching Material Resource for BEAST 2
Barido-Sottani, Joëlle, Bošková, Veronika, du Plessis, Louis, Kühnert, Denise, Magnus, Carsten, Mitov, Venelin, Müller, Nicola F., Pečerska, Jūlija, Rasmussen, David A., Zhang, Chi, Drummond, Alexei J., Heath, Tracy A., Pybus, Oliver G., Vaughan, Timothy G., Stadler, Tanja
Published in Systematic biology (01.01.2018)
Published in Systematic biology (01.01.2018)
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Journal Article
Seven rules for simulations in paleobiology
Barido-Sottani, Joëlle, Saupe, Erin E, Smiley, Tara M, Soul, Laura C, Wright, April M, Warnock, Rachel C. M
Published in Paleobiology (01.11.2020)
Published in Paleobiology (01.11.2020)
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Journal Article
Phylogenetic Insights into Diversification
Morlon, Hélène, Andréoletti, Jérémy, Barido-Sottani, Joëlle, Lambert, Sophia, Perez-Lamarque, Benoît, Quintero, Ignacio, Senderov, Viktor, Veron, Pierre
Published in Annual review of ecology, evolution, and systematics (04.11.2024)
Published in Annual review of ecology, evolution, and systematics (04.11.2024)
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