by Bonneau, Richard, Facciotti, Marc T., Reiss, David J., Schmid, Amy K., Pan, Min, Kaur, Amardeep, Thorsson, Vesteinn, Shannon, Paul, Johnson, Michael H., Bare, J. Christopher, Longabaugh, William, Vuthoori, Madhavi, Whitehead, Kenia, Madar, Aviv, Suzuki, Lena, Mori, Tetsuya, Chang, Dong-Eun, DiRuggiero, Jocelyne, Johnson, Carl H., Hood, Leroy, Baliga, Nitin S.
Published in Cell (28.12.2007)

by Chaibub Neto, Elias, Bare, J Christopher, Margolin, Adam A
Published in PloS one (07.10.2014)

by Sendorek, Dorota H, Caloian, Cristian, Ellrott, Kyle, Bare, J Christopher, Yamaguchi, Takafumi N, Ewing, Adam D, Houlahan, Kathleen E, Norman, Thea C, Margolin, Adam A, Stuart, Joshua M, Boutros, Paul C
Published in BMC bioinformatics (31.01.2018)

by Reiss, David J, Koide, Tie, Baliga, Nitin S, Peterson, Amelia, Pratap, Abhishek, Bare, J Christopher, Pan, Min, Van, Phu T, Schmid, Amy K, Marzolf, Bruz, Deutsch, Eric W, Pang, Wyming Lee, Martin, Dan, Facciotti, Marc T, Lo, Fang-Yin
Published in Molecular systems biology (16.06.2009)

by Turkarslan, Serdar, Reiss, David J, Gibbins, Goodwin, Su, Wan Lin, Pan, Min, Bare, J Christopher, Plaisier, Christopher L, Baliga, Nitin S
Published in Molecular systems biology (22.11.2011)

by Bare, J Christopher, Koide, Tie, Reiss, David J, Tenenbaum, Dan, Baliga, Nitin S
Published in BMC bioinformatics (19.07.2010)

by Ewing, Adam D, Houlahan, Kathleen E, Hu, Yin, Ellrott, Kyle, Caloian, Cristian, Yamaguchi, Takafumi N, Bare, J Christopher, P'ng, Christine, Waggott, Daryl, Sabelnykova, Veronica Y, Kellen, Michael R, Norman, Thea C, Haussler, David, Friend, Stephen H, Stolovitzky, Gustavo, Margolin, Adam A, Stuart, Joshua M, Boutros, Paul C
Published in Nature methods (01.07.2015)

by Bare, J Christopher, Shannon, Paul T, Schmid, Amy K, Baliga, Nitin S
Published in BMC bioinformatics (19.11.2007)

by Boutros, Paul C, Ewing, Adam D, Ellrott, Kyle, Norman, Thea C, Dang, Kristen K, Hu, Yin, Kellen, Michael R, Suver, Christine, Bare, J Christopher, Stein, Lincoln D, Spellman, Paul T, Stolovitzky, Gustavo, Friend, Stephen H, Margolin, Adam A, Stuart, Joshua M
Published in Nature genetics (01.04.2014)

by Turkarslan, Serdar, Wurtmann, Elisabeth J, Wu, Wei-Ju, Jiang, Ning, Bare, J Christopher, Foley, Karen, Reiss, David J, Novichkov, Pavel, Baliga, Nitin S
Published in Nucleic acids research (01.01.2014)

by Yoon, Sung Ho, Reiss, David J, Bare, J Christopher, Tenenbaum, Dan, Pan, Min, Slagel, Joseph, Moritz, Robert L, Lim, Sujung, Hackett, Murray, Menon, Angeli Lal, Adams, Michael W W, Barnebey, Adam, Yannone, Steven M, Leigh, John A, Baliga, Nitin S
Published in Genome research (01.11.2011)

by Plaisier, Christopher L., Bare, J. Christopher, Baliga, Nitin S.
Published in Nucleic acids research (01.07.2011)

by Tenenbaum, Dan, Bare, J Christopher, Baliga, Nitin S
Published in Source code for biology and medicine (13.07.2010)

by Lee, Anna Y, Ewing, Adam D, Ellrott, Kyle, Hu, Yin, Houlahan, Kathleen E, Bare, J Christopher, Espiritu, Shadrielle Melijah G, Huang, Vincent, Dang, Kristen, Chong, Zechen, Caloian, Cristian, Yamaguchi, Takafumi N, Kellen, Michael R, Chen, Ken, Norman, Thea C, Friend, Stephen H, Guinney, Justin, Stolovitzky, Gustavo, Haussler, David, Margolin, Adam A, Stuart, Joshua M, Boutros, Paul C
Published in Genome Biology (06.11.2018)

by Zhou, Fang Liz, Guinney, Justin, Wang, Tao, Bare, J. Christopher, Norman, Thea C, Bot, Brian, Shen, Liji, Winner, Kimberly Kanigel, Friend, Stephen Henry, Abdallah, Kald, Stolovitzky, Gustavo A., Xie, Yang, Costello, James
Published in Journal of clinical oncology (10.01.2016)

by Turkarslan, Serdar, Wurtmann, Elisabeth J., Wu, Wei-Ju, Jiang, Ning, Bare, J. Christopher, Foley, Karen, Reiss, David J., Novichkov, Pavel, Baliga, Nitin S.
Published in Nucleic acids research (23.11.2013)

by Eduati, Federica, Mangravite, Lara M, Wang, Tao, Tang, Hao, Bare, J Christopher, Huang, Ruili, Norman, Thea, Kellen, Mike, Menden, Michael P, Yang, Jichen, Zhan, Xiaowei, Zhong, Rui, Xiao, Guanghua, Xia, Menghang, Abdo, Nour, Kosyk, Oksana, NIEHS-NCATS-UNC DREAM Toxicogenetics Collaboration, the, Friend, Stephen, Dearry, Allen, Simeonov, Anton, Tice, Raymond R, Rusyn, Ivan, Wright, Fred A, Stolovitzky, Gustavo, Xie, Yang, Saez-Rodriguez, Julio
Published in Nature biotechnology (01.10.2015)

by Sendorek, Dorota H, Caloian, Cristian, Ellrott, Kyle, Bare, J Christopher, Yamaguchi, Takafumi N, Ewing, Adam D, Houlahan, Kathleen E, Norman, Thea C, Margolin, Adam A, Stuart, Joshua M, Boutros, Paul C
Published in bioRxiv (17.10.2017)

by Lee, Anna Ying-Wah, Ewing, Adam D, Ellrott, Kyle, Hu, Yin, Houlahan, Kathleen E, Bare, J Christopher, Shadrielle Melijah G Espiritu, Huang, Vincent, Dang, Kristen, Chong, Zechen, Caloian, Cristian, Yamaguchi, Takafumi N, Icgc-Tcga Dream Somatic Mutation Calling Challenge Participants, Kellen, Michael R, Chen, Ken, Norman, Thea C, Friend, Stephen H, Guinney, Justin, Stolovitzky, Gustavo, Haussler, David, Margolin, Adam A, Stuart, Joshua M, Boutros, Paul C
Published in bioRxiv (28.08.2018)