A flexible codon in genomically recoded Escherichia coli permits programmable protein phosphorylation
Pirman, Natasha L, Barber, Karl W, Aerni, Hans R, Ma, Natalie J, Haimovich, Adrian D, Rogulina, Svetlana, Isaacs, Farren J, Rinehart, Jesse
Published in Nature communications (09.09.2015)
Published in Nature communications (09.09.2015)
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Journal Article
Heterogeneity of Stop Codon Readthrough in Single Bacterial Cells and Implications for Population Fitness
Fan, Yongqiang, Evans, Christopher R., Barber, Karl W., Banerjee, Kinshuk, Weiss, Kalyn J., Margolin, William, Igoshin, Oleg A., Rinehart, Jesse, Ling, Jiqiang
Published in Molecular cell (07.09.2017)
Published in Molecular cell (07.09.2017)
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Journal Article
Encoding human serine phosphopeptides in bacteria for proteome-wide identification of phosphorylation-dependent interactions
Barber, Karl W, Muir, Paul, Szeligowski, Richard V, Rogulina, Svetlana, Gerstein, Mark, Sampson, Jeffrey R, Isaacs, Farren J, Rinehart, Jesse
Published in Nature biotechnology (01.08.2018)
Published in Nature biotechnology (01.08.2018)
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Journal Article
Kinase Substrate Profiling Using a Proteome-wide Serine-Oriented Human Peptide Library
Barber, Karl W, Miller, Chad J, Jun, Jay W, Lou, Hua Jane, Turk, Benjamin E, Rinehart, Jesse
Published in Biochemistry (Easton) (07.08.2018)
Published in Biochemistry (Easton) (07.08.2018)
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Journal Article
SPAK and OSR1 play essential roles in potassium homeostasis through actions on the distal convoluted tubule
Ferdaus, Mohammed Z., Barber, Karl W., López‐Cayuqueo, Karen I., Terker, Andrew S., Argaiz, Eduardo R., Gassaway, Brandon M., Chambrey, Régine, Gamba, Gerardo, Rinehart, Jesse, McCormick, James A.
Published in The Journal of physiology (01.09.2016)
Published in The Journal of physiology (01.09.2016)
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Journal Article
Organisms with alternative genetic codes resolve unassigned codons via mistranslation and ribosomal rescue
Ma, Natalie Jing, Hemez, Colin F, Barber, Karl W, Rinehart, Jesse, Isaacs, Farren J
Published in eLife (30.10.2018)
Published in eLife (30.10.2018)
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Journal Article
Genome mining unearths a hybrid nonribosomal peptide synthetase-like-pteridine synthase biosynthetic gene cluster
Park, Hyun Bong, Perez, Corey E, Barber, Karl W, Rinehart, Jesse, Crawford, Jason M
Published in eLife (15.03.2017)
Published in eLife (15.03.2017)
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Journal Article
Distinct Hepatic PKA and CDK Signaling Pathways Control Activity-Independent Pyruvate Kinase Phosphorylation and Hepatic Glucose Production
Gassaway, Brandon M., Cardone, Rebecca L., Padyana, Anil K., Petersen, Max C., Judd, Evan T., Hayes, Sebastian, Tong, Shuilong, Barber, Karl W., Apostolidi, Maria, Abulizi, Abudukadier, Sheetz, Joshua B., Kshitiz, Aerni, Hans R., Gross, Stefan, Kung, Charles, Samuel, Varman T., Shulman, Gerald I., Kibbey, Richard G., Rinehart, Jesse
Published in Cell reports (Cambridge) (10.12.2019)
Published in Cell reports (Cambridge) (10.12.2019)
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Journal Article
Illuminating protein space with a programmable generative model
Ingraham, John B, Baranov, Max, Costello, Zak, Barber, Karl W, Wang, Wujie, Ismail, Ahmed, Frappier, Vincent, Lord, Dana M, Ng-Thow-Hing, Christopher, Van Vlack, Erik R, Tie, Shan, Xue, Vincent, Cowles, Sarah C, Leung, Alan, Rodrigues, João V, Morales-Perez, Claudio L, Ayoub, Alex M, Green, Robin, Puentes, Katherine, Oplinger, Frank, Panwar, Nishant V, Obermeyer, Fritz, Root, Adam R, Beam, Andrew L, Poelwijk, Frank J, Grigoryan, Gevorg
Published in Nature (London) (30.11.2023)
Published in Nature (London) (30.11.2023)
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Journal Article
Metabolic stress promotes stop-codon readthrough and phenotypic heterogeneity
Zhang, Hong, Lyu, Zhihui, Fan, Yongqiang, Evans, Christopher R., Barber, Karl W., Banerjee, Kinshuk, Igoshin, Oleg A., Rinehart, Jesse, Ling, Jiqiang
Published in Proceedings of the National Academy of Sciences - PNAS (08.09.2020)
Published in Proceedings of the National Academy of Sciences - PNAS (08.09.2020)
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Journal Article
PKCε contributes to lipid-induced insulin resistance through cross talk with p70S6K and through previously unknown regulators of insulin signaling
Gassaway, Brandon M., Petersen, Max C., Surovtseva, Yulia V., Barber, Karl W., Sheetz, Joshua B., Aerni, Hans R., Merkel, Jane S., Samuel, Varman T., Shulman, Gerald I., Rinehart, Jesse
Published in Proceedings of the National Academy of Sciences - PNAS (18.09.2018)
Published in Proceedings of the National Academy of Sciences - PNAS (18.09.2018)
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Journal Article
Robust production of recombinant phosphoproteins using cell-free protein synthesis
Oza, Javin P, Aerni, Hans R, Pirman, Natasha L, Barber, Karl W, Ter Haar, Charlotte M, Rogulina, Svetlana, Amrofell, Matthew B, Isaacs, Farren J, Rinehart, Jesse, Jewett, Michael C
Published in Nature communications (09.09.2015)
Published in Nature communications (09.09.2015)
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Journal Article
A central role for regulated protein stability in the control of TFE3 and MITF by nutrients
Nardone, Christopher, Palanski, Brad A., Scott, Daniel C., Timms, Richard T., Barber, Karl W., Gu, Xin, Mao, Aoyue, Leng, Yumei, Watson, Emma V., Schulman, Brenda A., Cole, Philip A., Elledge, Stephen J.
Published in Molecular cell (05.01.2023)
Published in Molecular cell (05.01.2023)
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Journal Article
Expression of TorsinA in a heterologous yeast system reveals interactions with lumenal domains of LINC and nuclear pore complex components
Chalfant, Madeleine, Barber, Karl W, Borah, Sapan, Thaller, David, Lusk, C Patrick
Published in Molecular biology of the cell (01.03.2019)
Published in Molecular biology of the cell (01.03.2019)
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Journal Article
Comparative Proteomics Enables Identification of Nonannotated Cold Shock Proteins in E. coli
D’Lima, Nadia G, Khitun, Alexandra, Rosenbloom, Aaron D, Yuan, Peijia, Gassaway, Brandon M, Barber, Karl W, Rinehart, Jesse, Slavoff, Sarah A
Published in Journal of proteome research (06.10.2017)
Published in Journal of proteome research (06.10.2017)
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