Single-cell spatial proteomic imaging for human neuropathology
Vijayaragavan, Kausalia, Cannon, Bryan J, Tebaykin, Dmitry, Bossé, Marc, Baranski, Alex, Oliveria, J P, Bukhari, Syed A, Mrdjen, Dunja, Corces, M Ryan, McCaffrey, Erin F, Greenwald, Noah F, Sigal, Yari, Marquez, Diana, Khair, Zumana, Bruce, Trevor, Goldston, Mako, Bharadwaj, Anusha, Montine, Kathleen S, Angelo, R Michael, Montine, Thomas J, Bendall, Sean C
Published in Acta neuropathologica communications (04.11.2022)
Published in Acta neuropathologica communications (04.11.2022)
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Journal Article
Multiplexed imaging reveals an IFN-γ-driven inflammatory state in nivolumab-associated gastritis
Ferrian, Selena, Liu, Candace C., McCaffrey, Erin F., Kumar, Rashmi, Nowicki, Theodore S., Dawson, David W., Baranski, Alex, Glaspy, John A., Ribas, Antoni, Bendall, Sean C., Angelo, Michael
Published in Cell reports. Medicine (19.10.2021)
Published in Cell reports. Medicine (19.10.2021)
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Single-cell metabolic profiling of human cytotoxic T cells
Hartmann, Felix J., Mrdjen, Dunja, McCaffrey, Erin, Glass, David R., Greenwald, Noah F., Bharadwaj, Anusha, Khair, Zumana, Verberk, Sanne G. S., Baranski, Alex, Baskar, Reema, Graf, William, Van Valen, David, Van den Bossche, Jan, Angelo, Michael, Bendall, Sean C.
Published in Nature biotechnology (01.02.2021)
Published in Nature biotechnology (01.02.2021)
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Journal Article
Transition to invasive breast cancer is associated with progressive changes in the structure and composition of tumor stroma
Risom, Tyler, Glass, David R., Averbukh, Inna, Liu, Candace C., Baranski, Alex, Kagel, Adam, McCaffrey, Erin F., Greenwald, Noah F., Rivero-Gutiérrez, Belén, Strand, Siri H., Varma, Sushama, Kong, Alex, Keren, Leeat, Srivastava, Sucheta, Zhu, Chunfang, Khair, Zumana, Veis, Deborah J., Deschryver, Katherine, Vennam, Sujay, Maley, Carlo, Hwang, E. Shelley, Marks, Jeffrey R., Bendall, Sean C., Colditz, Graham A., West, Robert B., Angelo, Michael
Published in Cell (20.01.2022)
Published in Cell (20.01.2022)
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Journal Article
The immunoregulatory landscape of human tuberculosis granulomas
McCaffrey, Erin F., Donato, Michele, Keren, Leeat, Chen, Zhenghao, Delmastro, Alea, Fitzpatrick, Megan B., Gupta, Sanjana, Greenwald, Noah F., Baranski, Alex, Graf, William, Kumar, Rashmi, Bosse, Marc, Fullaway, Christine Camacho, Ramdial, Pratista K., Forgó, Erna, Jojic, Vladimir, Van Valen, David, Mehra, Smriti, Khader, Shabaana A., Bendall, Sean C., van de Rijn, Matt, Kalman, Daniel, Kaushal, Deepak, Hunter, Robert L., Banaei, Niaz, Steyn, Adrie J. C., Khatri, Purvesh, Angelo, Michael
Published in Nature immunology (01.02.2022)
Published in Nature immunology (01.02.2022)
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Journal Article
A spatially resolved timeline of the human maternal–fetal interface
Greenbaum, Shirley, Averbukh, Inna, Soon, Erin, Rizzuto, Gabrielle, Baranski, Alex, Greenwald, Noah F., Kagel, Adam, Bosse, Marc, Jaswa, Eleni G., Khair, Zumana, Kwok, Shirley, Warshawsky, Shiri, Piyadasa, Hadeesha, Goldston, Mako, Spence, Angie, Miller, Geneva, Schwartz, Morgan, Graf, Will, Van Valen, David, Winn, Virginia D., Hollmann, Travis, Keren, Leeat, van de Rijn, Matt, Angelo, Michael
Published in Nature (London) (20.07.2023)
Published in Nature (London) (20.07.2023)
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Journal Article
MAUI
Baranski, Alex, Milo, Idan, Greenbaum, Shirley, Oliveria, John-Paul, Mrdjen, Dunja, Angelo, Michael, Keren, Leeat
Published in PLoS computational biology (19.04.2021)
Published in PLoS computational biology (19.04.2021)
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Journal Article
225: In-depth characterization of immune cells in preeclampsia using Multiplexed Ion Beam Imaging by Time-of-Flight (MIBI-TOF)
Greenbaum, Shirley, Bosse, Marc, Baranski, Alex, Khair, Zumana, Bruce, Trevor, Tebaykin, Dmitry, Oliveria, John Paul, Bendall, Sean C., Winn, Virginia D., Angelo, Mike
Published in American journal of obstetrics and gynecology (01.01.2020)
Published in American journal of obstetrics and gynecology (01.01.2020)
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Journal Article
Abstract PR05: Mapping the tumor and microenvironmental evolution underlying DCIS progression through multiplexed ion beam imaging
Risom, Tyler, Rivero, Belen, Liu, Candace, Baranski, Alex, Strand, Siri, Greenwald, Noah, McCaffrey, Erin, Varma, Sushama, Keren, Leeat, Srivastava, Sucheta, Zhu, Chunfang, Vennam, Sujay, Hwang, Shelley, Colditz, Graham, Bendall, Sean, West, Robert, Angelo, Michael
Published in Cancer research (Chicago, Ill.) (01.11.2020)
Published in Cancer research (Chicago, Ill.) (01.11.2020)
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Journal Article
Author Correction: The immunoregulatory landscape of human tuberculosis granulomas
McCaffrey, Erin F., Donato, Michele, Keren, Leeat, Chen, Zhenghao, Delmastro, Alea, Fitzpatrick, Megan B., Gupta, Sanjana, Greenwald, Noah F., Baranski, Alex, Graf, William, Kumar, Rashmi, Bosse, Marc, Fullaway, Christine Camacho, Ramdial, Pratista K., Forgó, Erna, Jojic, Vladimir, Van Valen, David, Mehra, Smriti, Khader, Shabaana A., Bendall, Sean C., van de Rijn, Matt, Kalman, Daniel, Kaushal, Deepak, Hunter, Robert L., Banaei, Niaz, Steyn, Adrie J. C., Khatri, Purvesh, Angelo, Michael
Published in Nature immunology (01.05.2022)
Published in Nature immunology (01.05.2022)
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Journal Article
Single-cell Spatial Proteomic Imaging for Human Neuropathology
Vijayaragavan, Kausalia, Cannon, Bryan J, Tebaykin, Dmitry, Bosse, Marc, Baranski, Alex, Oliveria, Jp, Mrdjen, Dunja, Corces, Ryan, Mccaffrey, Erin F, Greenwald, Noah, Sigal, Yari, Khair, Zumana, Bruce, Trevor, Bharadwaj, Anusha, Bukhari, Syed, Montine, Kathleen, Angelo, Michael, Montine, Thomas, Bendall, Sean C
Published in bioRxiv (10.03.2022)
Published in bioRxiv (10.03.2022)
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Paper
Multiplexed Single-cell Metabolic Profiles Organize the Spectrum of Human Cytotoxic T Cells
Hartmann, Felix J, Mrdjen, Dunja, Mccaffrey, Erin, Glass, David R, Greenwald, Noah F, Bharadwaj, Anusha, Khair, Zumana, Baranski, Alex, Baskar, Reema, Angelo, Michael, Bendall, Sean C
Published in bioRxiv (17.01.2020)
Published in bioRxiv (17.01.2020)
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Paper
Spatio-temporal coordination at the maternal-fetal interface promotes trophoblast invasion and vascular remodeling in the first half of human pregnancy
Greenbaum, Shirley, Averbukh, Inna, Soon, Erin, Rizzuto, Gabrielle, Baranski, Alex, Greenwald, Noah, Bosse, Marc, Jaswa, Eleni G, Khair, Zumana, Kwok, Shirley, Warshawsky, Shiri, Miller, Geneva, Schwartz, Morgan, Graf, Will, David Van Valen, Leeat Keren, Hollmann, Travis, Van De Rijn, Matt, Angelo, Michael
Published in bioRxiv (10.09.2021)
Published in bioRxiv (10.09.2021)
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Paper
Transition to invasive breast cancer is associated with progressive changes in the structure and composition of tumor stroma
Risom, Tyler, Glass, David R, Liu, Candace C, Rivero-Gutiérrez, Belén, Baranski, Alex, Mccaffrey, Erin F, Greenwald, Noah F, Kagel, Adam, Strand, Siri H, Varma, Sushama, Kong, Alex, Leeat Keren, Srivastava, Sucheta, Zhu, Chunfang, Khair, Zumana, Veis, Deborah J, Deschryver, Katherine, Vennam, Sujay, Maley, Carlo, E Shelley Hwang, Marks, Jefferey R, Bendall, Sean C, Colditz, Graham A, West, Robert B, Angelo, Michael
Published in bioRxiv (06.01.2021)
Published in bioRxiv (06.01.2021)
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Paper
Multiplexed imaging of human tuberculosis granulomas uncovers immunoregulatory features conserved across tissue and blood
Mccaffrey, Erin F, Donato, Michele, Leeat Keren, Chen, Zhenghao, Fitzpatrick, Megan, Jojic, Vladimir, Delmastro, Alea, Greenwald, Noah F, Baranski, Alex, Graf, William, Bosse, Marc, Ramdial, Pratista K, go, Erna, David Van Valen, Van De Rijn, Matt, Bendall, Sean C, Banaei, Niaz, Steyn, Adrie Jc, Khatri, Purvesh, Angelo, Michael
Published in bioRxiv (09.06.2020)
Published in bioRxiv (09.06.2020)
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