Clustering of 770,000 genomes reveals post-colonial population structure of North America
Han, Eunjung, Carbonetto, Peter, Curtis, Ross E., Wang, Yong, Granka, Julie M., Byrnes, Jake, Noto, Keith, Kermany, Amir R., Myres, Natalie M., Barber, Mathew J., Rand, Kristin A., Song, Shiya, Roman, Theodore, Battat, Erin, Elyashiv, Eyal, Guturu, Harendra, Hong, Eurie L., Chahine, Kenneth G., Ball, Catherine A.
Published in Nature communications (07.02.2017)
Published in Nature communications (07.02.2017)
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Ancestry inference using reference labeled clusters of haplotypes
Wang, Yong, Song, Shiya, Schraiber, Joshua G, Sedghifar, Alisa, Byrnes, Jake K, Turissini, David A, Hong, Eurie L, Ball, Catherine A, Noto, Keith
Published in BMC bioinformatics (25.09.2021)
Published in BMC bioinformatics (25.09.2021)
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A Prospective Analysis of Genetic Variants Associated with Human Lifespan
Wright, Kevin M, Rand, Kristin A, Kermany, Amir, Noto, Keith, Curtis, Don, Garrigan, Daniel, Slinkov, Dmitri, Dorfman, Ilya, Granka, Julie M, Byrnes, Jake, Myres, Natalie, Ball, Catherine A, Ruby, J Graham
Published in G3 : genes - genomes - genetics (01.09.2019)
Published in G3 : genes - genomes - genetics (01.09.2019)
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Expanded COVID-19 phenotype definitions reveal distinct patterns of genetic association and protective effects
Roberts, Genevieve H. L., Partha, Raghavendran, Rhead, Brooke, Knight, Spencer C., Park, Danny S., Coignet, Marie V., Zhang, Miao, Berkowitz, Nathan, Turrisini, David A., Gaddis, Michael, McCurdy, Shannon R., Pavlovic, Milos, Ruiz, Luong, Sass, Chodon, Haug Baltzell, Asher K., Guturu, Harendra, Girshick, Ahna R., Ball, Catherine A., Hong, Eurie L., Rand, Kristin A.
Published in Nature genetics (01.04.2022)
Published in Nature genetics (01.04.2022)
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COVID-19 susceptibility and severity risks in a cross-sectional survey of over 500 000 US adults
Knight, Spencer C, McCurdy, Shannon R, Rhead, Brooke, Coignet, Marie V, Park, Danny S, Roberts, Genevieve H L, Berkowitz, Nathan D, Zhang, Miao, Turissini, David, Delgado, Karen, Pavlovic, Milos, Haug Baltzell, Asher K, Guturu, Harendra, Rand, Kristin A, Girshick, Ahna R, Hong, Eurie L, Ball, Catherine A, Banda, Yambazi, Bi, Ke, Burton, Robert, Champine, Marjan, Curtis, Ross, Drokhlyansky, Abby, Elrick, Ashley, Foo, Cat, Gaddis, Michael, Gu, Jialiang, Hateley, Shannon, Harris, Heather, King, Shea, Maldonado, Christine, McCartney-Melstad, Evan, McFarland, Alexandra, Miller, Patty, Nguyen, Luong, Noto, Keith, Pei, Jingwen, Petersen, Jenna, Pew, Scott, Sass, Chodon, Schraiber, Josh, Sedghifar, Alisa, Smelter, Andrey, South, Sarah, Starr, Barry, Vaughn, Cecily, Wang, Yong
Published in BMJ open (12.10.2022)
Published in BMJ open (12.10.2022)
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Data standards for Omics data: the basis of data sharing and reuse
Chervitz, Stephen A, Deutsch, Eric W, Field, Dawn, Parkinson, Helen, Quackenbush, John, Rocca-Serra, Phillipe, Sansone, Susanna-Assunta, Stoeckert, Jr, Christian J, Taylor, Chris F, Taylor, Ronald, Ball, Catherine A
Published in Methods in molecular biology (Clifton, N.J.) (2011)
Published in Methods in molecular biology (Clifton, N.J.) (2011)
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Journal Article
PortEco: a resource for exploring bacterial biology through high-throughput data and analysis tools
Hu, James C, Sherlock, Gavin, Siegele, Deborah A, Aleksander, Suzanne A, Ball, Catherine A, Demeter, Janos, Gouni, Sushanth, Holland, Timothy A, Karp, Peter D, Lewis, John E, Liles, Nathan M, McIntosh, Brenley K, Mi, Huaiyu, Muruganujan, Anushya, Wymore, Farrell, Thomas, Paul D, Altman, Tomer
Published in Nucleic acids research (01.01.2014)
Published in Nucleic acids research (01.01.2014)
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Journal Article
Comparison of the Complete Protein Sets of Worm and Yeast: Orthology and Divergence
Chervitz, Stephen A., Aravind, L., Sherlock, Gavin, Ball, Catherine A., Koonin, Eugene V., Dwight, Selina S., Harris, Midori A., Dolinski, Kara, Mohr, Scott, Smith, Temple, Weng, Shuai, Cherry, J. Michael, Botstein, David
Published in Science (American Association for the Advancement of Science) (11.12.1998)
Published in Science (American Association for the Advancement of Science) (11.12.1998)
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Journal Article
Submission of microarray data to public repositories
Ball, Catherine A, Brazma, Alvis, Causton, Helen, Chervitz, Steve, Edgar, Ron, Hingamp, Pascal, Matese, John C, Parkinson, Helen, Quackenbush, John, Ringwald, Martin, Sansone, Susanna-Assunta, Sherlock, Gavin, Spellman, Paul, Stoeckert, Chris, Tateno, Yoshio, Taylor, Ronald, White, Joseph, Winegarden, Neil
Published in PLoS biology (01.09.2004)
Published in PLoS biology (01.09.2004)
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Journal Article
Microarray databases: standards and ontologies
Stoeckert, Jr, Christian J, Causton, Helen C, Ball, Catherine A
Published in Nature genetics (01.12.2002)
Published in Nature genetics (01.12.2002)
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Journal Article
Expanded COVID-19 phenotype definitions reveal distinct patterns of genetic association and protective effects
Roberts, Genevieve H. L., Partha, Raghavendran, Rhead, Brooke, Knight, Spencer C., Park, Danny S., Coignet, Marie V., Zhang, Miao, Berkowitz, Nathan, Turrisini, David A., Gaddis, Michael, McCurdy, Shannon R., Pavlovic, Milos, Ruiz, Luong, Sass, Chodon, Haug Baltzell, Asher K., Guturu, Harendra, Girshick, Ahna R., Ball, Catherine A., Hong, Eurie L., Rand, Kristin A.
Published in Nature genetics (01.04.2022)
Published in Nature genetics (01.04.2022)
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Journal Article
Repeatability of published microarray gene expression analyses
Jurman, Giuseppe, Page, Grier P, Ball, Catherine A, Mehta, Tapan, Falchi, Mario, Cui, Xiangqin, Coulibaly, Issa, van Noort, Vera, Nitzberg, Michael, Ioannidis, John P A, Culhane, Aedín C, Game, Laurence, Petretto, Enrico, Furlanello, Cesare, Allison, David B, Mangion, Jon
Published in Nature genetics (01.02.2009)
Published in Nature genetics (01.02.2009)
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Journal Article
The XBabelPhish MAGE-ML and XML translator
Maier, Don, Wymore, Farrell, Sherlock, Gavin, Ball, Catherine A
Published in BMC bioinformatics (18.01.2008)
Published in BMC bioinformatics (18.01.2008)
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Journal Article
Identification of genes periodically expressed in the human cell cycle and their expression in tumors
Whitfield, Michael L, Sherlock, Gavin, Saldanha, Alok J, Murray, John I, Ball, Catherine A, Alexander, Karen E, Matese, John C, Perou, Charles M, Hurt, Myra M, Brown, Patrick O, Botstein, David
Published in Molecular biology of the cell (01.06.2002)
Published in Molecular biology of the cell (01.06.2002)
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Journal Article
TB database: an integrated platform for tuberculosis research
Reddy, T. B. K., Riley, Robert, Wymore, Farrell, Montgomery, Phillip, DeCaprio, Dave, Engels, Reinhard, Gellesch, Marcel, Hubble, Jeremy, Jen, Dennis, Jin, Heng, Koehrsen, Michael, Larson, Lisa, Mao, Maria, Nitzberg, Michael, Sisk, Peter, Stolte, Christian, Weiner, Brian, White, Jared, Zachariah, Zachariah K., Sherlock, Gavin, Galagan, James E., Ball, Catherine A., Schoolnik, Gary K.
Published in Nucleic acids research (01.01.2009)
Published in Nucleic acids research (01.01.2009)
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Journal Article
Implementation of GenePattern within the Stanford Microarray Database
Hubble, Jeremy, Demeter, Janos, Jin, Heng, Mao, Maria, Nitzberg, Michael, Reddy, T.B.K, Wymore, Farrell, Zachariah, Zachariah K, Sherlock, Gavin, Ball, Catherine A
Published in Nucleic acids research (01.01.2009)
Published in Nucleic acids research (01.01.2009)
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Journal Article
The Stanford Microarray Database: implementation of new analysis tools and open source release of software
Demeter, Janos, Beauheim, Catherine, Gollub, Jeremy, Hernandez-Boussard, Tina, Jin, Heng, Maier, Donald, Matese, John C, Nitzberg, Michael, Farrell Wymore, Zachariah, Zachariah K, Brown, Patrick O, Sherlock, Gavin, Ball, Catherine A
Published in Nucleic acids research (01.01.2007)
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Published in Nucleic acids research (01.01.2007)
Journal Article
OntologyWidget - a reusable, embeddable widget for easily locating ontology terms
Beauheim, Catherine C, Wymore, Farrell, Nitzberg, Michael, Zachariah, Zachariah K, Jin, Heng, Skene, J H Pate, Ball, Catherine A, Sherlock, Gavin
Published in BMC bioinformatics (13.09.2007)
Published in BMC bioinformatics (13.09.2007)
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Journal Article
Gene Ontology: tool for the unification of biology
Botstein, David, Cherry, J. Michael, Ashburner, Michael, Ball, Catherine A, Blake, Judith A, Butler, Heather, Davis, Allan P, Dolinski, Kara, Dwight, Selina S, Eppig, Janan T, Harris, Midori A, Hill, David P, Issel-Tarver, Laurie, Kasarskis, Andrew, Lewis, Suzanna, Matese, John C, Richardson, Joel E, Ringwald, Martin, Rubin, Gerald M, Sherlock, Gavin
Published in Nature genetics (01.05.2000)
Published in Nature genetics (01.05.2000)
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