The diversification of methods for studying cell–cell interactions and communication
Armingol, Erick, Baghdassarian, Hratch M., Lewis, Nathan E.
Published in Nature reviews. Genetics (01.06.2024)
Published in Nature reviews. Genetics (01.06.2024)
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Journal Article
De novo DNA synthesis using polymerase-nucleotide conjugates
Palluk, Sebastian, Arlow, Daniel H, de Rond, Tristan, Barthel, Sebastian, Kang, Justine S, Bector, Rathin, Baghdassarian, Hratch M, Truong, Alisa N, Kim, Peter W, Singh, Anup K, Hillson, Nathan J, Keasling, Jay D
Published in Nature biotechnology (01.08.2018)
Published in Nature biotechnology (01.08.2018)
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Journal Article
Learned adaptive multiphoton illumination microscopy for large-scale immune response imaging
Pinkard, Henry, Baghdassarian, Hratch, Mujal, Adriana, Roberts, Ed, Hu, Kenneth H., Friedman, Daniel Haim, Malenica, Ivana, Shagam, Taylor, Fries, Adam, Corbin, Kaitlin, Krummel, Matthew F., Waller, Laura
Published in Nature communications (26.03.2021)
Published in Nature communications (26.03.2021)
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Journal Article
Inferring a spatial code of cell-cell interactions across a whole animal body
Armingol, Erick, Ghaddar, Abbas, Joshi, Chintan J, Baghdassarian, Hratch, Shamie, Isaac, Chan, Jason, Her, Hsuan-Lin, Berhanu, Samuel, Dar, Anushka, Rodriguez-Armstrong, Fabiola, Yang, Olivia, O'Rourke, Eyleen J, Lewis, Nathan E
Published in PLoS computational biology (01.11.2022)
Published in PLoS computational biology (01.11.2022)
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Journal Article
Multiple freeze-thaw cycles lead to a loss of consistency in poly(A)-enriched RNA sequencing
Kellman, Benjamin P, Baghdassarian, Hratch M, Pramparo, Tiziano, Shamie, Isaac, Gazestani, Vahid, Begzati, Arjana, Li, Shangzhong, Nalabolu, Srinivasa, Murray, Sarah, Lopez, Linda, Pierce, Karen, Courchesne, Eric, Lewis, Nathan E
Published in BMC genomics (21.01.2021)
Published in BMC genomics (21.01.2021)
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Journal Article
Systems glycobiology for discovering drug targets, biomarkers, and rational designs for glyco-immunotherapy
Chiang, Austin W. T, Baghdassarian, Hratch M, Kellman, Benjamin P, Bao, Bokan, Sorrentino, James T, Liang, Chenguang, Kuo, Chih-Chung, Masson, Helen O, Lewis, Nathan E
Published in Journal of biomedical science (22.06.2021)
Published in Journal of biomedical science (22.06.2021)
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Journal Article
Dysregulation of the secretory pathway connects Alzheimer’s disease genetics to aggregate formation
Kuo, Chih-Chung, Chiang, Austin W.T., Baghdassarian, Hratch M., Lewis, Nathan E.
Published in Cell systems (22.09.2021)
Published in Cell systems (22.09.2021)
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Journal Article
Library-based single-cell analysis of CAR signaling reveals drivers of in vivo persistence
Perez, Caleb R, Garmilla, Andrea, Nilsson, Avlant, Baghdassarian, Hratch M, Gordon, Khloe S, Lima, Louise G, Smith, Blake E, Maus, Marcela V, Lauffenburger, Douglas A, Birnbaum, Michael E
Published in bioRxiv : the preprint server for biology (02.05.2024)
Published in bioRxiv : the preprint server for biology (02.05.2024)
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Journal Article
Variant STAT4 and Response to Ruxolitinib in an Autoinflammatory Syndrome
Baghdassarian, Hratch, Blackstone, Sarah A., Clay, Owen S., Philips, Rachael, Matthiasardottir, Brynja, Nehrebecky, Michele, Hua, Vivian K., McVicar, Rachael, Liu, Yang, Tucker, Suzanne M., Randazzo, Davide, Deuitch, Natalie, Rosenzweig, Sofia, Mark, Adam, Sasik, Roman, Fisch, Kathleen M., Pimpale Chavan, Pallavi, Eren, Elif, Watts, Norman R., Ma, Chi A., Gadina, Massimo, Schwartz, Daniella M., Sanyal, Anwesha, Werner, Giffin, Murdock, David R., Horita, Nobuyuki, Chowdhury, Shimul, Dimmock, David, Jepsen, Kristen, Remmers, Elaine F., Goldbach-Mansky, Raphaela, Gahl, William A., O’Shea, John J., Milner, Joshua D., Lewis, Nathan E., Chang, Johanna, Kastner, Daniel L., Torok, Kathryn, Oda, Hirotsugu, Putnam, Christopher D., Broderick, Lori
Published in The New England journal of medicine (15.06.2023)
Published in The New England journal of medicine (15.06.2023)
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Journal Article
Combining LIANA and Tensor-cell2cell to decipher cell-cell communication across multiple samples
Baghdassarian, Hratch, Dimitrov, Daniel, Armingol, Erick, Saez-Rodriguez, Julio, Lewis, Nathan E
Published in bioRxiv (30.04.2023)
Published in bioRxiv (30.04.2023)
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Journal Article
Multiple freeze-thaw cycles lead to a loss of consistency in poly(A)-enriched RNA sequencing
Kellman, Benjamin, Baghdassarian, Hratch, Pramparo, Tiziano, Shamie, Isaac, Gazestani, Vahid, Begzati, Arjana, Li, Shengzhong, Nalabolu, Srinivasa, Murray, Sarah, Lopez, Linda, Pierce, Karen, Courchesne, Eric, Lewis, Nathan
Published in BMC Genomics (12.01.2021)
Published in BMC Genomics (12.01.2021)
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Web Resource
Learned adaptive multiphoton illumination microscopy
Pinkard, Henry, Baghdassarian, Hratch, Mujal, Adriana, Roberts, Ed, Hu, Kenneth H, Daniel Haim Friedman, Malenica, Ivana, Taylor Shagam, Fries, Adam, Corbin, Kaitlin, Krummel, Matthew F, Waller, Laura
Published in bioRxiv (15.08.2020)
Published in bioRxiv (15.08.2020)
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Paper
Multiple freeze-thaw cycles lead to a loss of consistency in poly(A)-enriched RNA sequencing
Kellman, Benjamin P, Baghdassarian, Hratch M, Pramparo, Tiziano, Shamie, Isaac, Gazestani, Vahid H, Begzati, Arjana, Li, Shengzhong, Nalabolu, Srinivasa, Murray, Sarah, Lopez, Linda, Pierce, Karen, Courchesne, Eric, Lewis, Nathan E
Published in bioRxiv (03.04.2020)
Published in bioRxiv (03.04.2020)
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Paper