The expanding landscape of 'oncohistone' mutations in human cancers
Nacev, Benjamin A, Feng, Lijuan, Bagert, John D, Lemiesz, Agata E, Gao, JianJiong, Soshnev, Alexey A, Kundra, Ritika, Schultz, Nikolaus, Muir, Tom W, Allis, C David
Published in Nature (London) (01.03.2019)
Published in Nature (London) (01.03.2019)
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Journal Article
A Qrr Noncoding RNA Deploys Four Different Regulatory Mechanisms to Optimize Quorum-Sensing Dynamics
Feng, Lihui, Rutherford, Steven T., Papenfort, Kai, Bagert, John D., van Kessel, Julia C., Tirrell, David A., Wingreen, Ned S., Bassler, Bonnie L.
Published in Cell (15.01.2015)
Published in Cell (15.01.2015)
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Journal Article
In situ chromatin interactomics using a chemical bait and trap approach
Burton, Antony J, Haugbro, Michael, Gates, Leah A, Bagert, John D, Allis, C David, Muir, Tom W
Published in Nature chemistry (01.06.2020)
Published in Nature chemistry (01.06.2020)
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Journal Article
Aromatic thiol-mediated cleavage of N-O bonds enables chemical ubiquitylation of folded proteins
Weller, Caroline E, Dhall, Abhinav, Ding, Feizhi, Linares, Edlaine, Whedon, Samuel D, Senger, Nicholas A, Tyson, Elizabeth L, Bagert, John D, Li, Xiaosong, Augusto, Ohara, Chatterjee, Champak
Published in Nature communications (29.09.2016)
Published in Nature communications (29.09.2016)
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Journal Article
Robust production of monovalent bispecific IgG antibodies through novel electrostatic steering mutations at the CH1-Cλ interface
Bagert, John D, Oganesyan, Vaheh, Chiang, Chi-I, Iannotti, Mike, Lin, Jia, Yang, Chunning, Payne, Sterling, McMahon, Will, Edwards, Samuel, Dippel, Andrew, Hutchinson, Mark, Huang, Fengying, Aleti, Vineela, Niu, Chendi, Qian, Chen, Denham, Jessica, Ferreira, Sofia, Pradhan, Pallab, Penney, Mark, Wang, Chunlei, Liu, Wenhai, Walseng, Even, Mazor, Yariv
Published in mAbs (2023)
Published in mAbs (2023)
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Journal Article
A Genetically Encoded Approach for Breaking Chromatin Symmetry
Lukasak, Bradley J, Thompson, Robert E, Mitchener, Michelle M, Feng, Vanessa J, Bagert, John D, Muir, Tom W
Published in ACS central science (23.02.2022)
Published in ACS central science (23.02.2022)
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Journal Article
Chromatin landscape signals differentially dictate the activities of mSWI/SNF family complexes
Mashtalir, Nazar, Dao, Hai T, Sankar, Akshay, Liu, Hengyuan, Corin, Aaron J, Bagert, John D, Ge, Eva J, D'Avino, Andrew R, Filipovski, Martin, Michel, Brittany C, Dann, Geoffrey P, Muir, Tom W, Kadoch, Cigall
Published in Science (American Association for the Advancement of Science) (16.07.2021)
Published in Science (American Association for the Advancement of Science) (16.07.2021)
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Journal Article
ISWI chromatin remodellers sense nucleosome modifications to determine substrate preference
Dann, Geoffrey P, Liszczak, Glen P, Bagert, John D, Müller, Manuel M, Nguyen, Uyen T T, Wojcik, Felix, Brown, Zachary Z, Bos, Jeffrey, Panchenko, Tatyana, Pihl, Rasmus, Pollock, Samuel B, Diehl, Katharine L, Allis, C David, Muir, Tom W
Published in Nature (London) (31.08.2017)
Published in Nature (London) (31.08.2017)
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Journal Article
Oncohistone mutations enhance chromatin remodeling and alter cell fates
Bagert, John D, Mitchener, Michelle M, Patriotis, Agata L, Dul, Barbara E, Wojcik, Felix, Nacev, Benjamin A, Feng, Lijuan, Allis, C David, Muir, Tom W
Published in Nature chemical biology (01.04.2021)
Published in Nature chemical biology (01.04.2021)
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Journal Article
Quantitative, Time-Resolved Proteomic Analysis by Combining Bioorthogonal Noncanonical Amino Acid Tagging and Pulsed Stable Isotope Labeling by Amino Acids in Cell Culture
Bagert, John D., Xie, Yushu J., Sweredoski, Michael J., Qi, Yutao, Hess, Sonja, Schuman, Erin M., Tirrell, David A.
Published in Molecular & cellular proteomics (01.05.2014)
Published in Molecular & cellular proteomics (01.05.2014)
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Journal Article
Cleavable Biotin Probes for Labeling of Biomolecules via Azide−Alkyne Cycloaddition
Szychowski, Janek, Mahdavi, Alborz, Hodas, Jennifer J. L, Bagert, John D, Ngo, John T, Landgraf, Peter, Dieterich, Daniela C, Schuman, Erin M, Tirrell, David A
Published in Journal of the American Chemical Society (29.12.2010)
Published in Journal of the American Chemical Society (29.12.2010)
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Journal Article
Robust production of monovalent bispecific IgG antibodies through novel electrostatic steering mutations at the C H 1-C λ interface
Bagert, John D, Oganesyan, Vaheh, Chiang, Chi-I, Iannotti, Mike, Lin, Jia, Yang, Chunning, Payne, Sterling, McMahon, Will, Edwards, Samuel, Dippel, Andrew, Hutchinson, Mark, Huang, Fengying, Aleti, Vineela, Niu, Chendi, Qian, Chen, Denham, Jessica, Ferreira, Sofia, Pradhan, Pallab, Penney, Mark, Wang, Chunlei, Liu, Wenhai, Walseng, Even, Mazor, Yariv
Published in mAbs (31.12.2023)
Published in mAbs (31.12.2023)
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Journal Article
Time-resolved proteomic analysis of quorum sensing in Vibrio harveyi
Bagert, John D, van Kessel, Julia C, Sweredoski, Michael J, Feng, Lihui, Hess, Sonja, Bassler, Bonnie L, Tirrell, David A
Published in Chemical science (Cambridge) (01.03.2016)
Published in Chemical science (Cambridge) (01.03.2016)
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Journal Article
Engineered Aminoacyl-tRNA Synthetase for Cell-Selective Analysis of Mammalian Protein Synthesis
Mahdavi, Alborz, Hamblin, Graham D, Jindal, Granton A, Bagert, John D, Dong, Cathy, Sweredoski, Michael J, Hess, Sonja, Schuman, Erin M, Tirrell, David A
Published in Journal of the American Chemical Society (06.04.2016)
Published in Journal of the American Chemical Society (06.04.2016)
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Journal Article
Panel: Software engineering body of knowledge (SWEBOK)
Bagert, D J, Dupuis, R, Freeman, P A, Saiedian, H, Shaw, M M, Thompson, J B
Published in Proceedings / International Conference on Software Engineering (01.01.2001)
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Published in Proceedings / International Conference on Software Engineering (01.01.2001)
Journal Article
Academic software engineering: what is and what could be? Results of the first annual survey for international SE programs
Modesitt, K.L., Bagert, D., Werth, L.
Published in Proceedings of the 23rd International Conference on Software Engineering. ICSE 2001 (2001)
Published in Proceedings of the 23rd International Conference on Software Engineering. ICSE 2001 (2001)
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Conference Proceeding