An optimized library for reference-based deconvolution of whole-blood biospecimens assayed using the Illumina HumanMethylationEPIC BeadArray
Salas, Lucas A, Koestler, Devin C, Butler, Rondi A, Hansen, Helen M, Wiencke, John K, Kelsey, Karl T, Christensen, Brock C
Published in Genome Biology (29.05.2018)
Published in Genome Biology (29.05.2018)
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Enhanced cell deconvolution of peripheral blood using DNA methylation for high-resolution immune profiling
Salas, Lucas A., Zhang, Ze, Koestler, Devin C., Butler, Rondi A., Hansen, Helen M., Molinaro, Annette M., Wiencke, John K., Kelsey, Karl T., Christensen, Brock C.
Published in Nature communications (09.02.2022)
Published in Nature communications (09.02.2022)
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Associations between serum perfluoroalkyl acids and LINE-1 DNA methylation
WATKINS, Deborah J, WELLENIUS, Gregory A, BUTLER, Rondi A, BARTELL, Scott M, FLETCHER, Tony, KELSEY, Karl T
Published in Environment international (01.02.2014)
Published in Environment international (01.02.2014)
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Global Hypomethylation Identifies Loci Targeted for Hypermethylation in Head and Neck Cancer
POAGE, Graham M, HOUSEMAN, E. Andres, CHRISTENSEN, Brock C, BUTLER, Rondi A, AVISSAR-WHITING, Michele, MCCLEAN, Michael D, WATERBOER, Tim, PAWLITA, Michael, MARSIT, Carmen J, KELSEY, Karl T
Published in Clinical cancer research (01.06.2011)
Published in Clinical cancer research (01.06.2011)
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Peripheral blood DNA methylation profiles are indicative of head and neck squamous cell carcinoma: An epigenome-wide association study
Langevin, Scott M., Koestler, Devin C., Christensen, Brock C., Butler, Rondi A., Wiencke, John K., Nelson, Heather H., Houseman, E. Andres, Marsit, Carmen J., Kelsey, Karl T.
Published in Epigenetics (01.03.2012)
Published in Epigenetics (01.03.2012)
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Journal Article
Improving cell mixture deconvolution by identifying optimal DNA methylation libraries (IDOL)
Koestler, Devin C, Jones, Meaghan J, Usset, Joseph, Christensen, Brock C, Butler, Rondi A, Kobor, Michael S, Wiencke, John K, Kelsey, Karl T
Published in BMC bioinformatics (08.03.2016)
Published in BMC bioinformatics (08.03.2016)
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Journal Article
Firefighter occupation is associated with increased risk for laryngeal and hypopharyngeal squamous cell carcinoma among men from the Greater Boston area
Langevin, Scott M, Eliot, Melissa, Butler, Rondi A, McClean, Michael, Kelsey, Karl T
Published in Occupational and environmental medicine (London, England) (01.06.2020)
Published in Occupational and environmental medicine (London, England) (01.06.2020)
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Journal Article
MicroRNA-Related Genetic Variants Associated with Survival of Head and Neck Squamous Cell Carcinoma
Wilkins, Owen M, Titus, Alexander J, Salas, Lucas A, Gui, Jiang, Eliot, Melissa, Butler, Rondi A, Sturgis, Erich M, Li, Guojun, Kelsey, Karl T, Christensen, Brock C
Published in Cancer epidemiology, biomarkers & prevention (01.01.2019)
Published in Cancer epidemiology, biomarkers & prevention (01.01.2019)
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Mature MicroRNA Sequence Polymorphism in MIR196A2 Is Associated with Risk and Prognosis of Head and Neck Cancer
CHRISTENSEN, Brock C, AVISSAR-WHITING, Michele, OUELLET, Lauren G, BUTLER, Rondi A, NELSON, Heather H, MCCLEAN, Michael D, MARSIT, Carmen J, KELSEY, Karl T
Published in Clinical cancer research (15.07.2010)
Published in Clinical cancer research (15.07.2010)
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Genome-scale identification of microRNA-related SNPs associated with risk of head and neck squamous cell carcinoma
Wilkins, Owen M, Titus, Alexander J, Gui, Jiang, Eliot, Melissa, Butler, Rondi A, Sturgis, Erich M, Li, Guojun, Kelsey, Karl T, Christensen, Brock C
Published in Carcinogenesis (New York) (01.10.2017)
Published in Carcinogenesis (New York) (01.10.2017)
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Chrysotile fibers in tissue adjacent to laryngeal squamous cell carcinoma in cases with a history of occupational asbestos exposure
Wronkiewicz, Stephanie K., Roggli, Victor L., Hinrichs, Benjamin H., Kendler, Ady, Butler, Rondi A., Christensen, Brock C., Marsit, Carmen J., Nelson, Heather H., McClean, Michael D., Kelsey, Karl T., Langevin, Scott M.
Published in Modern pathology (01.02.2020)
Published in Modern pathology (01.02.2020)
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Calculating detection limits and uncertainty of reference-based deconvolution of whole-blood DNA methylation data
Bell-Glenn, Shelby, Salas, Lucas A, Molinaro, Annette M, Butler, Rondi A, Christensen, Brock C, Kelsey, Karl T, Wiencke, John K, Koestler, Devin C
Published in Epigenomics (01.04.2023)
Published in Epigenomics (01.04.2023)
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A core of differentially methylated CpG loci in gMDSCs isolated from neonatal and adult sources
Berglund-Brown, Isabella, Nissen, Emily, Koestler, Devin C, Butler, Rondi A, Eliot, Melissa N, Padbury, James F, Salas, Lucas A, Molinaro, Annette M, Christensen, Brock C, Wiencke, John K, Kelsey, Karl T
Published in Clinical epigenetics (21.02.2022)
Published in Clinical epigenetics (21.02.2022)
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Journal Article
Identification of an Epigenetic Profile Classifier That Is Associated with Survival in Head and Neck Cancer
POAGE, Graham M, BUTLER, Rondi A, HOUSEMAN, E. Andrés, MCCLEAN, Michael D, NELSON, Heather H, CHRISTENSEN, Brock C, MARSIT, Carmen J, KELSEY, Karl T
Published in Cancer research (Chicago, Ill.) (01.06.2012)
Published in Cancer research (Chicago, Ill.) (01.06.2012)
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Novel DNA methylation targets in oral rinse samples predict survival of patients with oral squamous cell carcinoma
Langevin, Scott M, Butler, Rondi A, Eliot, Melissa, Pawlita, Michael, Maccani, Jennifer Z.J, McClean, Michael D, Kelsey, Karl T
Published in Oral oncology (01.11.2014)
Published in Oral oncology (01.11.2014)
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Journal Article
CpG island methylation profile in non-invasive oral rinse samples is predictive of oral and pharyngeal carcinoma
Langevin, Scott M, Eliot, Melissa, Butler, Rondi A, Cheong, Agnes, Zhang, Xiang, McClean, Michael D, Koestler, Devin C, Kelsey, Karl T
Published in Clinical epigenetics (03.12.2015)
Published in Clinical epigenetics (03.12.2015)
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Soft-shell clam ( Mya arenaria) p53: A structural and functional comparison to human p53
Holbrook, Lauren A.C., Butler, Rondi A., Cashon, Robert E., Van Beneden, Rebecca J.
Published in Gene (15.03.2009)
Published in Gene (15.03.2009)
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Journal Article
LINE-1 DNA methylation, smoking and risk of Parkinson's disease
Searles Nielsen, Susan, Checkoway, Harvey, Butler, Rondi A, Nelson, Heather H, Farin, Federico M, Longstreth, Jr, W T, Franklin, Gary M, Swanson, Phillip D, Kelsey, Karl T
Published in Journal of Parkinson's disease (2012)
Published in Journal of Parkinson's disease (2012)
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Aryl hydrocarbon receptor (AhR)-independent effects of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) on softshell clam (Mya arenaria) reproductive tissue
Butler, Rondi A., Kelley, Melissa L., Olberding, Kristen E., Gardner, George R., Van Beneden, Rebecca J.
Published in Comparative biochemistry and physiology. Toxicology & pharmacology (01.07.2004)
Published in Comparative biochemistry and physiology. Toxicology & pharmacology (01.07.2004)
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