An optimized library for reference-based deconvolution of whole-blood biospecimens assayed using the Illumina HumanMethylationEPIC BeadArray
Salas, Lucas A, Koestler, Devin C, Butler, Rondi A, Hansen, Helen M, Wiencke, John K, Kelsey, Karl T, Christensen, Brock C
Published in Genome Biology (29.05.2018)
Published in Genome Biology (29.05.2018)
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Journal Article
Enhanced cell deconvolution of peripheral blood using DNA methylation for high-resolution immune profiling
Salas, Lucas A., Zhang, Ze, Koestler, Devin C., Butler, Rondi A., Hansen, Helen M., Molinaro, Annette M., Wiencke, John K., Kelsey, Karl T., Christensen, Brock C.
Published in Nature communications (09.02.2022)
Published in Nature communications (09.02.2022)
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Journal Article
Improving cell mixture deconvolution by identifying optimal DNA methylation libraries (IDOL)
Koestler, Devin C, Jones, Meaghan J, Usset, Joseph, Christensen, Brock C, Butler, Rondi A, Kobor, Michael S, Wiencke, John K, Kelsey, Karl T
Published in BMC bioinformatics (08.03.2016)
Published in BMC bioinformatics (08.03.2016)
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Journal Article
Firefighter occupation is associated with increased risk for laryngeal and hypopharyngeal squamous cell carcinoma among men from the Greater Boston area
Langevin, Scott M, Eliot, Melissa, Butler, Rondi A, McClean, Michael, Kelsey, Karl T
Published in Occupational and environmental medicine (London, England) (01.06.2020)
Published in Occupational and environmental medicine (London, England) (01.06.2020)
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Journal Article
Associations between serum perfluoroalkyl acids and LINE-1 DNA methylation
WATKINS, Deborah J, WELLENIUS, Gregory A, BUTLER, Rondi A, BARTELL, Scott M, FLETCHER, Tony, KELSEY, Karl T
Published in Environment international (01.02.2014)
Published in Environment international (01.02.2014)
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Journal Article
MicroRNA-Related Genetic Variants Associated with Survival of Head and Neck Squamous Cell Carcinoma
Wilkins, Owen M, Titus, Alexander J, Salas, Lucas A, Gui, Jiang, Eliot, Melissa, Butler, Rondi A, Sturgis, Erich M, Li, Guojun, Kelsey, Karl T, Christensen, Brock C
Published in Cancer epidemiology, biomarkers & prevention (01.01.2019)
Published in Cancer epidemiology, biomarkers & prevention (01.01.2019)
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Journal Article
Mature MicroRNA Sequence Polymorphism in MIR196A2 Is Associated with Risk and Prognosis of Head and Neck Cancer
CHRISTENSEN, Brock C, AVISSAR-WHITING, Michele, OUELLET, Lauren G, BUTLER, Rondi A, NELSON, Heather H, MCCLEAN, Michael D, MARSIT, Carmen J, KELSEY, Karl T
Published in Clinical cancer research (15.07.2010)
Published in Clinical cancer research (15.07.2010)
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Journal Article
Global Hypomethylation Identifies Loci Targeted for Hypermethylation in Head and Neck Cancer
POAGE, Graham M, HOUSEMAN, E. Andres, CHRISTENSEN, Brock C, BUTLER, Rondi A, AVISSAR-WHITING, Michele, MCCLEAN, Michael D, WATERBOER, Tim, PAWLITA, Michael, MARSIT, Carmen J, KELSEY, Karl T
Published in Clinical cancer research (01.06.2011)
Published in Clinical cancer research (01.06.2011)
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Journal Article
Genome-scale identification of microRNA-related SNPs associated with risk of head and neck squamous cell carcinoma
Wilkins, Owen M, Titus, Alexander J, Gui, Jiang, Eliot, Melissa, Butler, Rondi A, Sturgis, Erich M, Li, Guojun, Kelsey, Karl T, Christensen, Brock C
Published in Carcinogenesis (New York) (01.10.2017)
Published in Carcinogenesis (New York) (01.10.2017)
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Journal Article
Chrysotile fibers in tissue adjacent to laryngeal squamous cell carcinoma in cases with a history of occupational asbestos exposure
Wronkiewicz, Stephanie K., Roggli, Victor L., Hinrichs, Benjamin H., Kendler, Ady, Butler, Rondi A., Christensen, Brock C., Marsit, Carmen J., Nelson, Heather H., McClean, Michael D., Kelsey, Karl T., Langevin, Scott M.
Published in Modern pathology (01.02.2020)
Published in Modern pathology (01.02.2020)
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Journal Article
Implications of LINE1 Methylation for Bladder Cancer Risk in Women
WILHELM, Charlotte S, KELSEY, Karl T, KARAGAS, Margaret R, MARSIT, Carmen J, BUTLER, Rondi, PLAZA, Silvia, GAGNE, Luc, ZENS, M. Scot, ANDREW, Angeline S, MORRIS, Steven, NELSON, Heather H, SCHNED, Alan R
Published in Clinical cancer research (01.03.2010)
Published in Clinical cancer research (01.03.2010)
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Journal Article
Maternal serum PFOA concentration and DNA methylation in cord blood: A pilot study
Kingsley, Samantha L., Kelsey, Karl T., Butler, Rondi, Chen, Aimin, Eliot, Melissa N., Romano, Megan E., Houseman, Andres, Koestler, Devin C., Lanphear, Bruce P., Yolton, Kimberly, Braun, Joseph M.
Published in Environmental research (01.10.2017)
Published in Environmental research (01.10.2017)
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Journal Article
Calculating detection limits and uncertainty of reference-based deconvolution of whole-blood DNA methylation data
Bell-Glenn, Shelby, Salas, Lucas A, Molinaro, Annette M, Butler, Rondi A, Christensen, Brock C, Kelsey, Karl T, Wiencke, John K, Koestler, Devin C
Published in Epigenomics (01.04.2023)
Published in Epigenomics (01.04.2023)
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Journal Article
Serum dioxin and DNA methylation in the sperm of operation ranch hand veterans exposed to Agent Orange
Kelsey, Karl T, Rytel, Matthew, Dere, Edward, Butler, Rondi, Eliot, Melissa, Huse, Susan M, Houseman, E Andres, Koestler, Devin C, Boekelheide, Kim
Published in Environmental health (29.10.2019)
Published in Environmental health (29.10.2019)
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Journal Article
Methylation cytometric pretreatment blood immune profiles with tumor mutation burden as prognostic indicators for survival outcomes in head and neck cancer patients on anti-PD-1 therapy
Zhang, Ze, Sehgal, Kartik, Shirai, Keisuke, Butler, Rondi A., Wiencke, John K., Koestler, Devin C., Ramush, Geat, Lee, Min Kyung, Molinaro, Annette M., Stolrow, Hannah G., Birnbaum, Ariel, Salas, Lucas A., Haddad, Robert I., Kelsey, Karl T., Christensen, Brock C.
Published in NPJ precision oncology (18.11.2024)
Published in NPJ precision oncology (18.11.2024)
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Journal Article
Peripheral blood DNA methylation profiles are indicative of head and neck squamous cell carcinoma: An epigenome-wide association study
Langevin, Scott M., Koestler, Devin C., Christensen, Brock C., Butler, Rondi A., Wiencke, John K., Nelson, Heather H., Houseman, E. Andres, Marsit, Carmen J., Kelsey, Karl T.
Published in Epigenetics (01.03.2012)
Published in Epigenetics (01.03.2012)
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Journal Article
DNA methylation in the adipose tissue and whole blood of Agent Orange-exposed Operation Ranch Hand veterans: a pilot study
Rytel, Matthew R, Butler, Rondi, Eliot, Melissa, Braun, Joseph M, Houseman, E Andres, Kelsey, Karl T
Published in Environmental health (13.04.2021)
Published in Environmental health (13.04.2021)
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Journal Article
A core of differentially methylated CpG loci in gMDSCs isolated from neonatal and adult sources
Berglund-Brown, Isabella, Nissen, Emily, Koestler, Devin C, Butler, Rondi A, Eliot, Melissa N, Padbury, James F, Salas, Lucas A, Molinaro, Annette M, Christensen, Brock C, Wiencke, John K, Kelsey, Karl T
Published in Clinical epigenetics (21.02.2022)
Published in Clinical epigenetics (21.02.2022)
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Journal Article
47 Baseline blood DNA methylation-based immune profiles and tumor mutational burden predict survival outcomes in anti-PD-1 treated head and neck cancer patient
Zhang, Ze, Sehgal, Kartik, Shirai, Keisuke, Butler, Rondi, Wiencke, John, Koestler, Devin, Ramush, Geat, Lee, Min Kyung, Molinaro, Annette, Stolrow, Hannah, Salas, Lucas A, Haddad, Robert, Kelsey, Karl, Christensen, Brock
Published in Journal for immunotherapy of cancer (01.11.2023)
Published in Journal for immunotherapy of cancer (01.11.2023)
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