Profiling molecular regulators of recurrence in chemorefractory triple-negative breast cancers
Hancock, Bradley A, Chen, Yu-Hsiang, Solzak, Jeffrey P, Ahmad, Mufti N, Wedge, David C, Brinza, Dumitru, Scafe, Charles, Veitch, James, Gottimukkala, Rajesh, Short, Walt, Atale, Rutuja V, Ivan, Mircea, Badve, Sunil S, Schneider, Bryan P, Lu, Xiongbin, Miller, Kathy D, Radovich, Milan
Published in Breast cancer research : BCR (05.08.2019)
Published in Breast cancer research : BCR (05.08.2019)
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Journal Article
Next-generation sequencing of circulating tumor DNA to predict recurrence in triple-negative breast cancer patients with residual disease after neoadjuvant chemotherapy
Chen, Yu-Hsiang, Hancock, Bradley A, Solzak, Jeffrey P, Brinza, Dumitru, Scafe, Charles, Miller, Kathy D, Radovich, Milan
Published in NPJ breast cancer (03.07.2017)
Published in NPJ breast cancer (03.07.2017)
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Journal Article
Single cell genome amplification accelerates identification of the apratoxin biosynthetic pathway from a complex microbial assemblage
Grindberg, Rashel V, Ishoey, Thomas, Brinza, Dumitru, Esquenazi, Eduardo, Coates, R Cameron, Liu, Wei-ting, Gerwick, Lena, Dorrestein, Pieter C, Pevzner, Pavel, Lasken, Roger, Gerwick, William H
Published in PloS one (12.04.2011)
Published in PloS one (12.04.2011)
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Journal Article
TRIP: a method for novel transcript reconstruction from paired-end RNA-seq reads
Mangul, Serghei, Caciula, Adrian, Brinza, Dumitru, Mandoiu, Ion I, Zelikovsky, Alex
Published in BMC bioinformatics (14.12.2012)
Published in BMC bioinformatics (14.12.2012)
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Journal Article
Abstract 2402: A research approach for the detection of somatic mutations at 0.5% frequency from cfDNA and cTc DNA using a multiplex sequencing assay targeting 2000 tumor mutations
Brinza, Dumitru, Dhingra, Dalia, Scafe, Charles, Chien, Richard, Hyland, Fiona
Published in Cancer research (Chicago, Ill.) (01.08.2015)
Published in Cancer research (Chicago, Ill.) (01.08.2015)
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Journal Article
Development of a breast and lung cancer research panel to target therapeutically relevant copy number and gene fusion variants from blood
Bagai, Varun, Schageman, Jeoffrey, Brinza, Dumitru, Li, Yanchun, Gu, Jian, Bramlett, Kelli
Published in Journal of clinical oncology (20.05.2017)
Published in Journal of clinical oncology (20.05.2017)
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Journal Article
RAPID detection of gene–gene interactions in genome-wide association studies
Brinza, Dumitru, Schultz, Matthew, Tesler, Glenn, Bafna, Vineet
Published in Bioinformatics (15.11.2010)
Published in Bioinformatics (15.11.2010)
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Journal Article
Abstract 3622: Complete workflow for detection of low frequency somatic mutations from cell-free DNA using Ion Torrent™ platforms
Gu, Jian, Brinza, Dumitru, Mongan, Ann, Chien, Richard, Dhingra, Dalia, Hyland, Fiona, Bramlett, Kelli
Published in Cancer research (Chicago, Ill.) (15.07.2016)
Published in Cancer research (Chicago, Ill.) (15.07.2016)
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Journal Article
Abstract 5396: An NGS workflow to detect down to 0.1% allelic frequency in cfDNA for breast and colon cancers
Dhingra, Dalia, Chien, Richard, Gu, Jian, Brinza, Dumitru, Chaudhary, Ruchi, Banjara, Kunal, Li, Yanchun, Ballesteros-Villagrana, Efren, Bramlett, Kelli
Published in Cancer research (Chicago, Ill.) (01.07.2017)
Published in Cancer research (Chicago, Ill.) (01.07.2017)
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Journal Article
Abstract 4931: A circulating cell free DNA workflow for targeted sequencing - from isolation through validation
Dhingra, Dalia, Fang, Xingwang, Carter, Matt, Brinza, Dumitru, Scafe, Charles, Davies, Christopher, Hyland, Fiona
Published in Cancer research (Chicago, Ill.) (01.08.2015)
Published in Cancer research (Chicago, Ill.) (01.08.2015)
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Journal Article
Abstract 3959: Detection of somatic mutations at 0.1% frequency from cfDNA in peripheral blood with a multiplex next-generation sequencing assay
Brinza, Dumitru, Mongan, Ann, Chen, Richard, Dhingra, Dalia, Gu, Jian, Au-Young, Janice, Hyland, Fiona, Bramlett, Kelli
Published in Cancer research (Chicago, Ill.) (15.07.2016)
Published in Cancer research (Chicago, Ill.) (15.07.2016)
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Journal Article
합성 방법에 의한 고속-정방향 시퀀싱
ETZIONI YOAV, OBERSTRASS FLORIAN, ALMOGY GILAD, PRATT MARK, BARAD OMER, BRINZA DUMITRU, TREPAGNIER ELIANE
Year of Publication 15.03.2022
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Year of Publication 15.03.2022
Patent
Comprehensive detection of ctDNA variants at 0.1% allelic frequency using a broad targeted NGS panel for liquid biopsy research
Chien, Richard, Brinza, Dumitru, Gu, Jian, Dhingra, Dalia, Banjara, Kunal, Li, Yanchun, Bagai, Varun, Schageman, Jeoffrey, Ballesteros-Villagrana, Efren, Chaudhary, Ruchi, Hanif, Khalid, Au-Young, Janice, Hyland, Fiona, Bramlett, Kelli
Published in Journal of clinical oncology (20.05.2017)
Published in Journal of clinical oncology (20.05.2017)
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Journal Article
Transcriptome assembly and quantification from Ion Torrent RNA-Seq data
Mangul, Serghei, Caciula, Adrian, Al Seesi, Sahar, Brinza, Dumitru, Mӑndoiu, Ion, Zelikovsky, Alex
Published in BMC genomics (2014)
Published in BMC genomics (2014)
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Journal Article
압축된 분자 태깅된 핵산 서열 데이터를 사용하여 융합을 검출하는 방법
GOTTIMUKKALA RAJESH, BAI CHENG ZONG, BAGAI VARUN, SCHAGEMAN JEOFFREY, BRINZA DUMITRU
Year of Publication 27.05.2020
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Year of Publication 27.05.2020
Patent
분석물질 분석 및 검출을 위한 방법 및 시스템
BARBEE KRISTOPHER, SCHULTE DEREK, ALMOGY GILAD, PRISTINSKI DENIS, PRATT MARK, LAKDAWALLA ABIZAR, SULLIVAN JAMIE, BARTOV AVISHAI, MENCHEN STEVEN, BECKETT NATHAN, BRINZA DUMITRU
Year of Publication 06.10.2021
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Year of Publication 06.10.2021
Patent