Transcriptional Landscape of Human Tissue Lymphocytes Unveils Uniqueness of Tumor-Infiltrating T Regulatory Cells
De Simone, Marco, Arrigoni, Alberto, Rossetti, Grazisa, Gruarin, Paola, Ranzani, Valeria, Politano, Claudia, Bonnal, Raoul J.P., Provasi, Elena, Sarnicola, Maria Lucia, Panzeri, Ilaria, Moro, Monica, Crosti, Mariacristina, Mazzara, Saveria, Vaira, Valentina, Bosari, Silvano, Palleschi, Alessandro, Santambrogio, Luigi, Bovo, Giorgio, Zucchini, Nicola, Totis, Mauro, Gianotti, Luca, Cesana, Giancarlo, Perego, Roberto A., Maroni, Nirvana, Pisani Ceretti, Andrea, Opocher, Enrico, De Francesco, Raffaele, Geginat, Jens, Stunnenberg, Hendrik G., Abrignani, Sergio, Pagani, Massimiliano
Published in Immunity (Cambridge, Mass.) (15.11.2016)
Published in Immunity (Cambridge, Mass.) (15.11.2016)
Get full text
Journal Article
Whole-Genome Pyrosequencing of an Epidemic Multidrug-Resistant Acinetobacter baumannii Strain Belonging to the European Clone II Group
IACONO, Michele, VILLA, Laura, CARATTOLI, Alessandra, FORTINI, Daniela, BORDONI, Roberta, IMPERI, Francesco, BONNAL, Raoul J. P, SICHERITZ-PONTEN, Thomas, DE BELLIS, Gianluca, VISCA, Paolo, CASSONE, Antonio
Published in Antimicrobial Agents and Chemotherapy (01.07.2008)
Published in Antimicrobial Agents and Chemotherapy (01.07.2008)
Get full text
Journal Article
Clonally expanded EOMES+ Tr1-like cells in primary and metastatic tumors are associated with disease progression
Bonnal, Raoul J. P., Rossetti, Grazisa, Lugli, Enrico, De Simone, Marco, Gruarin, Paola, Brummelman, Jolanda, Drufuca, Lorenzo, Passaro, Marco, Bason, Ramona, Gervasoni, Federica, Della Chiara, Giulia, D’Oria, Claudia, Martinovic, Martina, Curti, Serena, Ranzani, Valeria, Cordiglieri, Chiara, Alvisi, Giorgia, Mazza, Emilia Maria Cristina, Oliveto, Stefania, Silvestri, Ylenia, Carelli, Elena, Mazzara, Saveria, Bosotti, Roberto, Sarnicola, Maria Lucia, Godano, Chiara, Bevilacqua, Valeria, Lorenzo, Mariangela, Siena, Salvatore, Bonoldi, Emanuela, Sartore-Bianchi, Andrea, Amatu, Alessio, Veronesi, Giulia, Novellis, Pierluigi, Alloisio, Marco, Giani, Alessandro, Zucchini, Nicola, Opocher, Enrico, Ceretti, Andrea Pisani, Mariani, Nicolò, Biffo, Stefano, Prati, Daniele, Bardelli, Alberto, Geginat, Jens, Lanzavecchia, Antonio, Abrignani, Sergio, Pagani, Massimiliano
Published in Nature immunology (01.06.2021)
Published in Nature immunology (01.06.2021)
Get full text
Journal Article
Intermediate-conductance Ca2+-activated K+ channels (IKCa1) regulate human prostate cancer cell proliferation through a close control of calcium entry
Lallet-Daher, H, Roudbaraki, M, Bavencoffe, A, Mariot, P, Gackière, F, Bidaux, G, Urbain, R, Gosset, P, Delcourt, P, Fleurisse, L, Slomianny, C, Dewailly, E, Mauroy, B, Bonnal, J L, Skryma, R, Prevarskaya, N
Published in Oncogene (16.04.2009)
Published in Oncogene (16.04.2009)
Get full text
Journal Article
The coding and long noncoding single-cell atlas of the developing human fetal striatum
Bocchi, Vittoria Dickinson, Conforti, Paola, Vezzoli, Elena, Besusso, Dario, Cappadona, Claudio, Lischetti, Tiziana, Galimberti, Maura, Ranzani, Valeria, Bonnal, Raoul J P, De Simone, Marco, Rossetti, Grazisa, He, Xiaoling, Kamimoto, Kenji, Espuny-Camacho, Ira, Faedo, Andrea, Gervasoni, Federica, Vuono, Romina, Morris, Samantha A, Chen, Jian, Felsenfeld, Dan, Pavesi, Giulio, Barker, Roger A, Pagani, Massimiliano, Cattaneo, Elena
Published in Science (American Association for the Advancement of Science) (07.05.2021)
Published in Science (American Association for the Advancement of Science) (07.05.2021)
Get full text
Journal Article
Novel interferon-sensitive genes unveiled by correlation-driven gene selection and systems biology
Cheroni, Cristina, Manganaro, Lara, Donnici, Lorena, Bevilacqua, Valeria, Bonnal, Raoul J. P., Rossi, Riccardo L., De Francesco, Raffaele
Published in Scientific reports (10.09.2021)
Published in Scientific reports (10.09.2021)
Get full text
Journal Article
A transcriptional sketch of a primary human breast cancer by 454 deep sequencing
Guffanti, Alessandro, Iacono, Michele, Pelucchi, Paride, Kim, Namshin, Soldà, Giulia, Croft, Larry J, Taft, Ryan J, Rizzi, Ermanno, Askarian-Amiri, Marjan, Bonnal, Raoul J, Callari, Maurizio, Mignone, Flavio, Pesole, Graziano, Bertalot, Giovanni, Bernardi, Luigi Rossi, Albertini, Alberto, Lee, Christopher, Mattick, John S, Zucchi, Ileana, De Bellis, Gianluca
Published in BMC genomics (20.04.2009)
Published in BMC genomics (20.04.2009)
Get full text
Journal Article
Publisher Correction: Novel interferon-sensitive genes unveiled by correlation-driven gene selection and systems biology
Cheroni, Cristina, Manganaro, Lara, Donnici, Lorena, Bevilacqua, Valeria, Bonnal, Raoul J. P., Rossi, Riccardo L., De Francesco, Raffaele
Published in Scientific reports (30.09.2021)
Published in Scientific reports (30.09.2021)
Get full text
Journal Article
RSSsite: a reference database and prediction tool for the identification of cryptic Recombination Signal Sequences in human and murine genomes
Merelli, Ivan, Guffanti, Alessandro, Fabbri, Marco, Cocito, Andrea, Furia, Laura, Grazini, Ursula, Bonnal, Raoul J, Milanesi, Luciano, McBlane, Fraser
Published in Nucleic acids research (01.07.2010)
Published in Nucleic acids research (01.07.2010)
Get full text
Journal Article
Role of microRNAs and long-non-coding RNAs in CD4+ T-cell differentiation
Pagani, Massimiliano, Rossetti, Grazisa, Panzeri, Ilaria, de Candia, Paola, Bonnal, Raoul J. P., Rossi, Riccardo L., Geginat, Jens, Abrignani, Sergio
Published in Immunological reviews (01.05.2013)
Published in Immunological reviews (01.05.2013)
Get full text
Journal Article
miRiadne: a web tool for consistent integration of miRNA nomenclature
Bonnal, Raoul J P, Rossi, Riccardo L, Carpi, Donatella, Ranzani, Valeria, Abrignani, Sergio, Pagani, Massimiliano
Published in Nucleic acids research (01.07.2015)
Published in Nucleic acids research (01.07.2015)
Get full text
Journal Article
Evidence for specific TRPM8 expression in human prostate secretory epithelial cells: functional androgen receptor requirement
Bidaux, G, Roudbaraki, M, Merle, C, Crépin, A, Delcourt, P, Slomianny, C, Thebault, S, Bonnal, J-L, Benahmed, M, Cabon, F, Mauroy, B, Prevarskaya, N
Published in Endocrine-related cancer (01.06.2005)
Published in Endocrine-related cancer (01.06.2005)
Get full text
Journal Article
The Ruby UCSC API: accessing the UCSC genome database using Ruby
Mishima, Hiroyuki, Aerts, Jan, Katayama, Toshiaki, Bonnal, Raoul J P, Yoshiura, Koh-ichiro
Published in BMC bioinformatics (21.09.2012)
Published in BMC bioinformatics (21.09.2012)
Get full text
Journal Article
Ca2+ homeostasis and apoptotic resistance of neuroendocrine-differentiated prostate cancer cells
Vanoverberghe, K, Vanden Abeele, F, Mariot, P, Lepage, G, Roudbaraki, M, Bonnal, J L, Mauroy, B, Shuba, Y, Skryma, R, Prevarskaya, N
Published in Cell death and differentiation (01.03.2004)
Published in Cell death and differentiation (01.03.2004)
Get full text
Journal Article
FALDO: a semantic standard for describing the location of nucleotide and protein feature annotation
Bolleman, Jerven T, Mungall, Christopher J, Strozzi, Francesco, Baran, Joachim, Dumontier, Michel, Bonnal, Raoul J P, Buels, Robert, Hoehndorf, Robert, Fujisawa, Takatomo, Katayama, Toshiaki, Cock, Peter J A
Published in Journal of biomedical semantics (13.06.2016)
Published in Journal of biomedical semantics (13.06.2016)
Get full text
Journal Article
Community-driven development for computational biology at Sprints, Hackathons and Codefests
Möller, Steffen, Afgan, Enis, Banck, Michael, Bonnal, Raoul J P, Booth, Timothy, Chilton, John, Cock, Peter J A, Gumbel, Markus, Harris, Nomi, Holland, Richard, Kalaš, Matúš, Kaján, László, Kibukawa, Eri, Powel, David R, Prins, Pjotr, Quinn, Jacqueline, Sallou, Olivier, Strozzi, Francesco, Seemann, Torsten, Sloggett, Clare, Soiland-Reyes, Stian, Spooner, William, Steinbiss, Sascha, Tille, Andreas, Travis, Anthony J, Guimera, Roman, Katayama, Toshiaki, Chapman, Brad A
Published in BMC bioinformatics (27.11.2014)
Published in BMC bioinformatics (27.11.2014)
Get full text
Journal Article
Biogem: an effective tool-based approach for scaling up open source software development in bioinformatics
BONNAL, Raoul J. P, AERTS, Jan, STROZZI, Francesco, SYME, Rob, VOS, Rutger, WENNBLOM, Trevor J, WOODCROFT, Ben J, KATAYAMA, Toshiaki, PRINS, Pjotr, GITHINJI, George, GOTO, Naohisa, MACLEAN, Dan, MILLER, Chase A, MISHIMA, Hiroyuki, PAGANI, Massimiliano, RAMIREZ-GONZALEZ, Ricardo, SMANT, Geert
Published in Bioinformatics (Oxford, England) (01.04.2012)
Published in Bioinformatics (Oxford, England) (01.04.2012)
Get full text
Journal Article