Identification and correction of systematic error in high-throughput sequence data
Meacham, Frazer, Boffelli, Dario, Dhahbi, Joseph, Martin, David I K, Singer, Meromit, Pachter, Lior
Published in BMC bioinformatics (21.11.2011)
Published in BMC bioinformatics (21.11.2011)
Get full text
Journal Article
Selection-free genome editing of the sickle mutation in human adult hematopoietic stem/progenitor cells
DeWitt, Mark A, Magis, Wendy, Bray, Nicolas L, Wang, Tianjiao, Berman, Jennifer R, Urbinati, Fabrizia, Heo, Seok-Jin, Mitros, Therese, Muñoz, Denise P, Boffelli, Dario, Kohn, Donald B, Walters, Mark C, Carroll, Dana, Martin, David I K, Corn, Jacob E
Published in Science translational medicine (12.10.2016)
Published in Science translational medicine (12.10.2016)
Get more information
Journal Article
Genome methylation in D. melanogaster is found at specific short motifs and is independent of DNMT2 activity
Takayama, Sachiko, Dhahbi, Joseph, Roberts, Adam, Mao, Guanxiong, Heo, Seok-Jin, Pachter, Lior, Martin, David I K, Boffelli, Dario
Published in Genome research (01.05.2014)
Published in Genome research (01.05.2014)
Get full text
Journal Article
Epithelial TNF controls cell differentiation and CFTR activity to maintain intestinal mucin homeostasis
Reyes, Efren A, Castillo-Azofeifa, David, Rispal, Jérémie, Wald, Tomas, Zwick, Rachel K, Palikuqi, Brisa, Mujukian, Angela, Rabizadeh, Shervin, Gupta, Alexander R, Gardner, James M, Boffelli, Dario, Gartner, Zev J, Klein, Ophir D
Published in The Journal of clinical investigation (16.10.2023)
Published in The Journal of clinical investigation (16.10.2023)
Get full text
Journal Article
Comparative genomics at the vertebrate extremes
Rubin, Edward M, Boffelli, Dario, Nobrega, Marcelo A
Published in Nature reviews. Genetics (01.06.2004)
Published in Nature reviews. Genetics (01.06.2004)
Get full text
Journal Article
Symbiosis insights through metagenomic analysis of a microbial consortium
Rubin, Edward M, Dubilier, Nicole, Woyke, Tanja, Teeling, Hanno, Ivanova, Natalia N, Huntemann, Marcel, Richter, Michael, Gloeckner, Frank Oliver, Boffelli, Dario, Anderson, Iain J, Barry, Kerrie W, Shapiro, Harris J, Szeto, Ernest, Kyrpides, Nikos C, Mussmann, Marc, Amann, Rudolf, Bergin, Claudia, Ruehland, Caroline
Published in Nature (26.10.2006)
Published in Nature (26.10.2006)
Get full text
Journal Article
CRISPR-Cas9 interrogation of a putative fetal globin repressor in human erythroid cells
Chung, Jennifer E, Magis, Wendy, Vu, Jonathan, Heo, Seok-Jin, Wartiovaara, Kirmo, Walters, Mark C, Kurita, Ryo, Nakamura, Yukio, Boffelli, Dario, Martin, David I K, Corn, Jacob E, DeWitt, Mark A
Published in PloS one (15.01.2019)
Published in PloS one (15.01.2019)
Get full text
Journal Article
Application of full-genome analysis to diagnose rare monogenic disorders
Shieh, Joseph T., Penon-Portmann, Monica, Wong, Karen H. Y., Levy-Sakin, Michal, Verghese, Michelle, Slavotinek, Anne, Gallagher, Renata C., Mendelsohn, Bryce A., Tenney, Jessica, Beleford, Daniah, Perry, Hazel, Chow, Stephen K., Sharo, Andrew G., Brenner, Steven E., Qi, Zhongxia, Yu, Jingwei, Klein, Ophir D., Martin, David, Kwok, Pui-Yan, Boffelli, Dario
Published in Npj genomic medicine (23.09.2021)
Published in Npj genomic medicine (23.09.2021)
Get full text
Journal Article
Activation-induced cytidine deaminase (AID) is necessary for the epithelial–mesenchymal transition in mammary epithelial cells
Muñoz, Denise P, Lee, Elbert L, Takayama, Sachiko, Coppé, Jean-Philippe, Heo, Seok-Jin, Boffelli, Dario, Di Noia, Javier M, Martin, David I K
Published in Proceedings of the National Academy of Sciences - PNAS (06.08.2013)
Published in Proceedings of the National Academy of Sciences - PNAS (06.08.2013)
Get full text
Journal Article
Single-Cell Transcriptome Analysis of CD34 + Stem Cell-Derived Myeloid Cells Infected With Human Cytomegalovirus
Galinato, Melissa, Shimoda, Kristen, Aguiar, Alexis, Hennig, Fiona, Boffelli, Dario, McVoy, Michael A, Hertel, Laura
Published in Frontiers in microbiology (21.03.2019)
Published in Frontiers in microbiology (21.03.2019)
Get full text
Journal Article
Phylogenetic Shadowing of Primate Sequences to Find Functional Regions of the Human Genome
Boffelli, Dario, McAuliffe, Jon, Ovcharenko, Dmitriy, Lewis, Keith D., Ovcharenko, Ivan, Pachter, Lior, Rubin, Edward M.
Published in Science (American Association for the Advancement of Science) (28.02.2003)
Published in Science (American Association for the Advancement of Science) (28.02.2003)
Get full text
Journal Article
Deep sequencing reveals novel microRNAs and regulation of microRNA expression during cell senescence
Dhahbi, Joseph M, Atamna, Hani, Boffelli, Dario, Magis, Wendy, Spindler, Stephen R, Martin, David I K
Published in PloS one (26.05.2011)
Published in PloS one (26.05.2011)
Get full text
Journal Article
Publisher Correction: Application of full-genome analysis to diagnose rare monogenic disorders
Shieh, Joseph T., Penon-Portmann, Monica, Wong, Karen H. Y., Levy-Sakin, Michal, Verghese, Michelle, Slavotinek, Anne, Gallagher, Renata C., Mendelsohn, Bryce A., Tenney, Jessica, Beleford, Daniah, Perry, Hazel, Chow, Stephen K., Sharo, Andrew G., Brenner, Steven E., Qi, Zhongxia, Yu, Jingwei, Klein, Ophir D., Martin, David, Kwok, Pui-Yan, Boffelli, Dario
Published in Npj genomic medicine (12.10.2021)
Published in Npj genomic medicine (12.10.2021)
Get full text
Journal Article
Identification of a Receptor Mediating Absorption of Dietary Cholesterol in the Intestine
Hauser, Helmut, Dyer, James H, Nandy, Andreas, Vega, Miguel A, Werder, Moritz, Bieliauskaite, Egle, Weber, Franz E, Compassi, Sabina, Gemperli, Anja, Boffelli, Dario, Wehrli, Ernst, Schulthess, Georg, Phillips, Michael C
Published in Biochemistry (Easton) (22.12.1998)
Published in Biochemistry (Easton) (22.12.1998)
Get full text
Journal Article
Intraspecies sequence comparisons for annotating genomes
Boffelli, Dario, Weer, Claire V, Weng, Li, Lewis, Keith D, Shoukry, Malak I, Pachter, Lior, Keys, David N, Rubin, Edward M
Published in Genome research (01.12.2004)
Published in Genome research (01.12.2004)
Get full text
Journal Article
Apolipoprotein(a) Gene Enhancer Resides within a LINE Element
Yang, Zhuoying, Boffelli, Dario, Boonmark, Nataya, Schwartz, Karen, Lawn, Richard
Published in The Journal of biological chemistry (09.01.1998)
Published in The Journal of biological chemistry (09.01.1998)
Get full text
Journal Article
Lymphangiocrine signals are required for proper intestinal repair after cytotoxic injury
Palikuqi, Brisa, Rispal, Jérémie, Reyes, Efren A., Vaka, Dedeepya, Boffelli, Dario, Klein, Ophir
Published in Cell stem cell (04.08.2022)
Published in Cell stem cell (04.08.2022)
Get full text
Journal Article