cytoHubba: identifying hub objects and sub-networks from complex interactome
Chin, Chia-Hao, Chen, Shu-Hwa, Wu, Hsin-Hung, Ho, Chin-Wen, Ko, Ming-Tat, Lin, Chung-Yen
Published in BMC systems biology (08.12.2014)
Published in BMC systems biology (08.12.2014)
Get full text
Journal Article
A systematic analysis of FDA-approved anticancer drugs
Sun, Jingchun, Wei, Qiang, Zhou, Yubo, Wang, Jingqi, Liu, Qi, Xu, Hua
Published in BMC systems biology (03.10.2017)
Published in BMC systems biology (03.10.2017)
Get full text
Journal Article
COBRApy: COnstraints-Based Reconstruction and Analysis for Python
Ebrahim, Ali, Lerman, Joshua A, Palsson, Bernhard O, Hyduke, Daniel R
Published in BMC systems biology (08.08.2013)
Published in BMC systems biology (08.08.2013)
Get full text
Journal Article
An additional k-means clustering step improves the biological features of WGCNA gene co-expression networks
Botía, Juan A, Vandrovcova, Jana, Forabosco, Paola, Guelfi, Sebastian, D'Sa, Karishma, Hardy, John, Lewis, Cathryn M, Ryten, Mina, Weale, Michael E
Published in BMC systems biology (12.04.2017)
Published in BMC systems biology (12.04.2017)
Get full text
Journal Article
Pretata: predicting TATA binding proteins with novel features and dimensionality reduction strategy
Zou, Quan, Wan, Shixiang, Ju, Ying, Tang, Jijun, Zeng, Xiangxiang
Published in BMC systems biology (23.12.2016)
Published in BMC systems biology (23.12.2016)
Get full text
Journal Article
DGCA: A comprehensive R package for Differential Gene Correlation Analysis
McKenzie, Andrew T, Katsyv, Igor, Song, Won-Min, Wang, Minghui, Zhang, Bin
Published in BMC systems biology (15.11.2016)
Published in BMC systems biology (15.11.2016)
Get full text
Journal Article
Data integration in the era of omics: current and future challenges
Gomez-Cabrero, David, Abugessaisa, Imad, Maier, Dieter, Teschendorff, Andrew, Merkenschlager, Matthias, Gisel, Andreas, Ballestar, Esteban, Bongcam-Rudloff, Erik, Conesa, Ana, Tegnér, Jesper
Published in BMC Systems Biology (2014)
Published in BMC Systems Biology (2014)
Get full text
Journal Article
Publication
TIGRESS: Trustful Inference of Gene REgulation using Stability Selection
Haury, Anne-Claire, Mordelet, Fantine, Vera-Licona, Paola, Vert, Jean-Philippe
Published in BMC systems biology (22.11.2012)
Published in BMC systems biology (22.11.2012)
Get full text
Journal Article
GoldenPiCS: a Golden Gate-derived modular cloning system for applied synthetic biology in the yeast Pichia pastoris
Prielhofer, Roland, Barrero, Juan J, Steuer, Stefanie, Gassler, Thomas, Zahrl, Richard, Baumann, Kristin, Sauer, Michael, Mattanovich, Diethard, Gasser, Brigitte, Marx, Hans
Published in BMC systems biology (08.12.2017)
Published in BMC systems biology (08.12.2017)
Get full text
Journal Article
Walking the interactome to identify human miRNA-disease associations through the functional link between miRNA targets and disease genes
Shi, Hongbo, Xu, Juan, Zhang, Guangde, Xu, Liangde, Li, Chunquan, Wang, Li, Zhao, Zheng, Jiang, Wei, Guo, Zheng, Li, Xia
Published in BMC systems biology (08.10.2013)
Published in BMC systems biology (08.10.2013)
Get full text
Journal Article
BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models
Li, Chen, Donizelli, Marco, Rodriguez, Nicolas, Dharuri, Harish, Endler, Lukas, Chelliah, Vijayalakshmi, Li, Lu, He, Enuo, Henry, Arnaud, Stefan, Melanie I, Snoep, Jacky L, Hucka, Michael, Le Novère, Nicolas, Laibe, Camille
Published in BMC systems biology (29.06.2010)
Published in BMC systems biology (29.06.2010)
Get full text
Journal Article
Parameter identifiability analysis and visualization in large-scale kinetic models of biosystems
Gábor, Attila, Villaverde, Alejandro F, Banga, Julio R
Published in BMC systems biology (05.05.2017)
Published in BMC systems biology (05.05.2017)
Get full text
Journal Article