Slingshot: cell lineage and pseudotime inference for single-cell transcriptomics
Street, Kelly, Risso, Davide, Fletcher, Russell B, Das, Diya, Ngai, John, Yosef, Nir, Purdom, Elizabeth, Dudoit, Sandrine
Published in BMC genomics (19.06.2018)
Published in BMC genomics (19.06.2018)
Get full text
Journal Article
Genome-wide investigation of WRKY gene family in pineapple: evolution and expression profiles during development and stress
Xie, Tao, Chen, Chengjie, Li, Chuhao, Liu, Jiarou, Liu, Chaoyang, He, Yehua
Published in BMC genomics (25.06.2018)
Published in BMC genomics (25.06.2018)
Get full text
Journal Article
Guidance for DNA methylation studies: statistical insights from the Illumina EPIC array
Mansell, Georgina, Gorrie-Stone, Tyler J, Bao, Yanchun, Kumari, Meena, Schalkwyk, Leonard S, Mill, Jonathan, Hannon, Eilis
Published in BMC genomics (14.05.2019)
Published in BMC genomics (14.05.2019)
Get full text
Journal Article
A review of deep learning applications for genomic selection
Montesinos-López, Osval Antonio, Montesinos-López, Abelardo, Pérez-Rodríguez, Paulino, Barrón-López, José Alberto, Martini, Johannes W R, Fajardo-Flores, Silvia Berenice, Gaytan-Lugo, Laura S, Santana-Mancilla, Pedro C, Crossa, José
Published in BMC genomics (06.01.2021)
Published in BMC genomics (06.01.2021)
Get full text
Journal Article
The Peach v2.0 release: high-resolution linkage mapping and deep resequencing improve chromosome-scale assembly and contiguity
Verde, Ignazio, Jenkins, Jerry, Dondini, Luca, Micali, Sabrina, Pagliarani, Giulia, Vendramin, Elisa, Paris, Roberta, Aramini, Valeria, Gazza, Laura, Rossini, Laura, Bassi, Daniele, Troggio, Michela, Shu, Shengqiang, Grimwood, Jane, Tartarini, Stefano, Dettori, Maria Teresa, Schmutz, Jeremy
Published in BMC genomics (11.03.2017)
Published in BMC genomics (11.03.2017)
Get full text
Journal Article
A reference genome for Nicotiana tabacum enables map-based cloning of homeologous loci implicated in nitrogen utilization efficiency
Edwards, K D, Fernandez-Pozo, N, Drake-Stowe, K, Humphry, M, Evans, A D, Bombarely, A, Allen, F, Hurst, R, White, B, Kernodle, S P, Bromley, J R, Sanchez-Tamburrino, J P, Lewis, R S, Mueller, L A
Published in BMC genomics (19.06.2017)
Published in BMC genomics (19.06.2017)
Get full text
Journal Article
Evolution and comparative genomics of the most common Trichoderma species
Kubicek, Christian P, Steindorff, Andrei S, Chenthamara, Komal, Manganiello, Gelsomina, Henrissat, Bernard, Zhang, Jian, Cai, Feng, Kopchinskiy, Alexey G, Kubicek, Eva M, Kuo, Alan, Baroncelli, Riccardo, Sarrocco, Sabrina, Noronha, Eliane Ferreira, Vannacci, Giovanni, Shen, Qirong, Grigoriev, Igor V, Druzhinina, Irina S
Published in BMC genomics (12.06.2019)
Published in BMC genomics (12.06.2019)
Get full text
Journal Article
CLARK: fast and accurate classification of metagenomic and genomic sequences using discriminative k-mers
Ounit, Rachid, Wanamaker, Steve, Close, Timothy J, Lonardi, Stefano
Published in BMC genomics (25.03.2015)
Published in BMC genomics (25.03.2015)
Get full text
Journal Article
HiFiAdapterFilt, a memory efficient read processing pipeline, prevents occurrence of adapter sequence in PacBio HiFi reads and their negative impacts on genome assembly
Sim, Sheina B, Corpuz, Renee L, Simmonds, Tyler J, Geib, Scott M
Published in BMC genomics (22.02.2022)
Published in BMC genomics (22.02.2022)
Get full text
Journal Article