X!TandemPipeline: A Tool to Manage Sequence Redundancy for Protein Inference and Phosphosite Identification
Langella, Olivier, Valot, Benoît, Balliau, Thierry, Blein-Nicolas, Mélisande, Bonhomme, Ludovic, Zivy, Michel
Published in Journal of proteome research (03.02.2017)
Published in Journal of proteome research (03.02.2017)
Get full text
Journal Article
Maize metabolome and proteome responses to controlled cold stress partly mimic early‐sowing effects in the field and differ from those of Arabidopsis
Urrutia, Maria, Blein‐Nicolas, Mélisande, Prigent, Sylvain, Bernillon, Stéphane, Deborde, Catherine, Balliau, Thierry, Maucourt, Mickaël, Jacob, Daniel, Ballias, Patricia, Bénard, Camille, Sellier, Hélène, Gibon, Yves, Giauffret, Catherine, Zivy, Michel, Moing, Annick
Published in Plant, cell and environment (01.05.2021)
Published in Plant, cell and environment (01.05.2021)
Get full text
Journal Article
Full Native timsTOF PASEF-Enabled Quantitative Proteomics with the i2MassChroQ Software Package
Langella, Olivier, Renne, Thomas, Balliau, Thierry, Davanture, Marlène, Brehmer, Sven, Zivy, Michel, Blein-Nicolas, Mélisande, Rusconi, Filippo
Published in Journal of proteome research (02.08.2024)
Published in Journal of proteome research (02.08.2024)
Get full text
Journal Article
Dynamics of Protein Phosphorylation during Arabidopsis Seed Germination
Baudouin, Emmanuel, Puyaubert, Juliette, Meimoun, Patrice, Blein-Nicolas, Mélisande, Davanture, Marlène, Zivy, Michel, Bailly, Christophe
Published in International journal of molecular sciences (01.07.2022)
Published in International journal of molecular sciences (01.07.2022)
Get full text
Journal Article
Quantitative Proteomics Analysis Confirmed Oxidative Metabolism Predominates in Streptomyces coelicolor versus Glycolytic Metabolism in Streptomyces lividans
Millan-Oropeza, Aaron, Henry, Céline, Blein-Nicolas, Mélisande, Aubert-Frambourg, Anne, Moussa, Fathi, Bleton, Jean, Virolle, Marie-Jöelle
Published in Journal of proteome research (07.07.2017)
Published in Journal of proteome research (07.07.2017)
Get full text
Journal Article
Obituary: Dominique Job (1947-2022)
Jamet, Elisabeth, Esquerré-Tugayé, Marie-Thérèse, Gallardo-Guerrero, Karine, Rolland, Norbert, Zivy, Michel, Blein-Nicolas, Mélisande, Vincent, Delphine, Gontero, Brigitte, Rajjou, Loïc
Published in Frontiers in plant science (08.05.2023)
Published in Frontiers in plant science (08.05.2023)
Get full text
Journal Article
A combined test for feature selection on sparse metaproteomics data-an alternative to missing value imputation
Plancade, Sandra, Berland, Magali, Blein-Nicolas, Mélisande, Langella, Olivier, Bassignani, Ariane, Juste, Catherine
Published in PeerJ (San Francisco, CA) (24.06.2022)
Published in PeerJ (San Francisco, CA) (24.06.2022)
Get full text
Journal Article
Sunflower Hybrids and Inbred Lines Adopt Different Physiological Strategies and Proteome Responses to Cope with Water Deficit
Duruflé, Harold, Balliau, Thierry, Blanchet, Nicolas, Chaubet, Adeline, Duhnen, Alexandra, Pouilly, Nicolas, Blein-Nicolas, Mélisande, Mangin, Brigitte, Maury, Pierre, Langlade, Nicolas Bernard, Zivy, Michel
Published in Biomolecules (Basel, Switzerland) (12.07.2023)
Published in Biomolecules (Basel, Switzerland) (12.07.2023)
Get full text
Journal Article
Physical Contact between Torulaspora delbrueckii and Saccharomyces cerevisiae Alters Cell Growth and Molecular Interactions in Grape Must
Chasseriaud, Laura, Albertin, Warren, Blein-Nicolas, Mélisande, Balliau, Thierry, Zivy, Michel, Coulon, Joana, Bely, Marina
Published in Beverages (Basel) (01.09.2023)
Published in Beverages (Basel) (01.09.2023)
Get full text
Journal Article
Identification of Hanks-Type Kinase PknB-Specific Targets in the Streptococcus thermophilus Phosphoproteome
Henry, Céline, Haller, Lucia, Blein-Nicolas, Mélisande, Zivy, Michel, Canette, Alexis, Verbrugghe, Morgane, Mézange, Christine, Boulay, Mylène, Gardan, Rozenn, Samson, Samantha, Martin, Véronique, André-Leroux, Gwenaëlle, Monnet, Véronique
Published in Frontiers in microbiology (19.06.2019)
Published in Frontiers in microbiology (19.06.2019)
Get full text
Journal Article
Fast alignment of mass spectra in large proteomics datasets, capturing dissimilarities arising from multiple complex modifications of peptides
Prunier, Grégoire, Cherkaoui, Mehdi, Lysiak, Albane, Langella, Olivier, Blein-Nicolas, Mélisande, Lollier, Virginie, Benoist, Emile, Jean, Géraldine, Fertin, Guillaume, Rogniaux, Hélène, Tessier, Dominique
Published in BMC bioinformatics (08.11.2023)
Published in BMC bioinformatics (08.11.2023)
Get full text
Journal Article
A systems genetics approach reveals environment-dependent associations between SNPs, protein coexpression, and drought-related traits in maize
Blein-Nicolas, Mélisande, Negro, Sandra Sylvia, Balliau, Thierry, Welcker, Claude, Cabrera-Bosquet, Llorenç, Nicolas, Stéphane Dimitri, Charcosset, Alain, Zivy, Michel
Published in Genome research (01.11.2020)
Published in Genome research (01.11.2020)
Get full text
Journal Article
The nitrate transporter-sensor MtNPF6.8 regulates the branched chain amino acid/pantothenate metabolic pathway in barrel medic (Medicago truncatula Gaertn.) root tip
Tarkowski, Łukasz P., Clochard, Thibault, Blein-Nicolas, Mélisande, Zivy, Michel, Baillau, Thierry, Abadie, Cyril, Morère-Le Paven, Marie-Christine, Limami, Anis M., Tcherkez, Guillaume, Montrichard, Françoise
Published in Plant physiology and biochemistry (01.01.2024)
Published in Plant physiology and biochemistry (01.01.2024)
Get full text
Journal Article
Peptide filtering differently affects the performances of XIC-based quantification methods
Belouah, Isma, Blein-Nicolas, Mélisande, Balliau, Thierry, Gibon, Yves, Zivy, Michel, Colombié, Sophie
Published in Journal of proteomics (20.02.2019)
Published in Journal of proteomics (20.02.2019)
Get full text
Journal Article