Temporal concordance between apical and transcriptional points of departure for chemical risk assessment
Thomas, Russell S, Wesselkamper, Scott C, Wang, Nina Ching Y, Zhao, Q Jay, Petersen, Dan D, Lambert, Jason C, Cote, Ila, Yang, Longlong, Healy, Eric, Black, Michael B, Clewell, 3rd, Harvey J, Allen, Bruce C, Andersen, Melvin E
Published in Toxicological sciences (01.07.2013)
Published in Toxicological sciences (01.07.2013)
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Journal Article
Integrating gene expression and splicing dynamics across dose-response oxidative modulators
Barutcu, A Rasim, Black, Michael B, Samuel, Raymond, Slattery, Scott, McMullen, Patrick D, Nong, Andy
Published in Frontiers in genetics (22.05.2024)
Published in Frontiers in genetics (22.05.2024)
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Journal Article
Cross-species comparisons of transcriptomic alterations in human and rat primary hepatocytes exposed to 2,3,7,8-tetrachlorodibenzo-p-dioxin
Black, Michael B, Budinsky, Robert A, Dombkowski, Alan, Cukovic, Daniela, LeCluyse, Edward L, Ferguson, Stephen S, Thomas, Russell S, Rowlands, J Craig
Published in Toxicological sciences (01.05.2012)
Published in Toxicological sciences (01.05.2012)
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Journal Article
MYC is an early response regulator of human adipogenesis in adipose stem cells
Deisenroth, Chad, Black, Michael B, Pendse, Salil, Pluta, Linda, Witherspoon, Sam M, McMullen, Patrick D, Thomas, Russell S
Published in PloS one (01.12.2014)
Published in PloS one (01.12.2014)
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Journal Article
A Qualitative Modeling Approach for Whole Genome Prediction Using High-Throughput Toxicogenomics Data and Pathway-Based Validation
Haider, Saad, Black, Michael B, Parks, Bethany B, Foley, Briana, Wetmore, Barbara A, Andersen, Melvin E, Clewell, Rebecca A, Mansouri, Kamel, McMullen, Patrick D
Published in Frontiers in pharmacology (02.10.2018)
Published in Frontiers in pharmacology (02.10.2018)
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Journal Article
RNA-sequencing (transcriptomic) data collected in liver and lung of male and female B6C3F1 mice exposed to various dose levels of 4-methylimidazole for 2, 5, or 28 days
Black, Michael B., Andersen, Melvin E., Pendse, Salil N., Borghoff, Susan J., Streicker, Michael, McMullen, Patrick D.
Published in Data in brief (01.10.2021)
Published in Data in brief (01.10.2021)
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Journal Article
A genomics-based analysis of relative potencies of dioxin-like compounds in primary rat hepatocytes
Rowlands, J Craig, Budinsky, Robert, Gollapudi, Bhaskar, Black, Michael B, Wolfinger, Russell D, Cukovic, Daniela, Dombkowski, Alan, Thompson, Chad M, Urban, Jonathan D, Thomas, Russell S
Published in Toxicological sciences (01.12.2013)
Published in Toxicological sciences (01.12.2013)
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Journal Article
Transcriptomic analysis of AHR wildtype and Knock-out rat livers supports TCDD's role in AHR/ARNT-mediated circadian disruption and hepatotoxicity
Andersen, Melvin E., Barutcu, A. Rasim, Black, Michael B., Harrill, Joshua A.
Published in Toxicology and applied pharmacology (01.06.2024)
Published in Toxicology and applied pharmacology (01.06.2024)
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Journal Article
Testicular Lumicrine Factors Regulate ERK, STAT, and NFKB Pathways in the Initial Segment of the Rat Epididymis to Prevent Apoptosis1
Xu, Bingfang, Abdel-Fattah, Rana, Yang, Ling, Crenshaw, Sallie A, Black, Michael B, Hinton, Barry T
Published in Biology of reproduction (01.06.2011)
Published in Biology of reproduction (01.06.2011)
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Journal Article
Biological system considerations for application of toxicogenomics in next-generation risk assessment and predictive toxicology
Black, Michael B., Stern, Allysa, Efremenko, Alina, Mallick, Pankajini, Moreau, Marjory, Hartman, Jessica K., McMullen, Patrick D.
Published in Toxicology in vitro (01.04.2022)
Published in Toxicology in vitro (01.04.2022)
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Journal Article
IVT-seq reveals extreme bias in RNA sequencing
Lahens, Nicholas F, Kavakli, Ibrahim Halil, Zhang, Ray, Hayer, Katharina, Black, Michael B, Dueck, Hannah, Pizarro, Angel, Kim, Junhyong, Irizarry, Rafael, Thomas, Russell S, Grant, Gregory R, Hogenesch, John B
Published in Genome biology (30.06.2014)
Published in Genome biology (30.06.2014)
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Journal Article
A comprehensive statistical analysis of predicting in vivo hazard using high-throughput in vitro screening
Thomas, Russell S, Black, Michael B, Li, Lili, Healy, Eric, Chu, Tzu-Ming, Bao, Wenjun, Andersen, Melvin E, Wolfinger, Russell D
Published in Toxicological sciences (01.08.2012)
Published in Toxicological sciences (01.08.2012)
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Journal Article
SLLP1, A Unique, Intra-acrosomal, Non-bacteriolytic, c Lysozyme-Like Protein of Human Spermatozoa
MANDAL, Arabinda, KLOTZ, Kenneth L, FLICKINGER, Charles J, HERR, John C, SHETTY, Jagathpala, JAYES, Friederike L, WOLKOWICZ, Michael J, BALLING, Laura C, COONROD, Scott A, BLACK, Michael B, DIEKMAN, Alan B, HAYSTEAD, Timothy A. J
Published in Biology of reproduction (01.05.2003)
Published in Biology of reproduction (01.05.2003)
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Journal Article
Relative impact of incorporating pharmacokinetics on predicting in vivo hazard and mode of action from high-throughput in vitro toxicity assays
Wetmore, Barbara A, Wambaugh, John F, Ferguson, Stephen S, Li, Lili, Clewell, 3rd, Harvey J, Judson, Richard S, Freeman, Kimberly, Bao, Wenjun, Sochaski, Mark A, Chu, Tzu-Ming, Black, Michael B, Healy, Eric, Allen, Brittany, Andersen, Melvin E, Wolfinger, Russell D, Thomas, Russell S
Published in Toxicological sciences (01.04.2013)
Published in Toxicological sciences (01.04.2013)
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Journal Article
A toxicogenomic approach for the risk assessment of the food contaminant acetamide
Nault, Rance, Bals, Bryan, Teymouri, Farzaneh, Black, Michael B., Andersen, Melvin E., McMullen, Patrick D., Krishnan, Seetha, Kuravadi, Nagesh, Paul, Neetha, Kumar, Santhosh, Kannan, Kamala, Jayachandra, K.C., Alagappan, Lakshmanan, Patel, Bhavesh Dhirajlal, Bogen, Kenneth T., Gollapudi, Bhaskar B., Klaunig, James E., Zacharewski, Tim R., Bringi, Venkataraman
Published in Toxicology and applied pharmacology (01.02.2020)
Published in Toxicology and applied pharmacology (01.02.2020)
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Journal Article
A systematic approach to evaluate plausible modes of actions for mouse lung tumors in mice exposed to 4-methylimidozole
Borghoff, Susan J., Fitch, Seneca E., Black, Michael B., McMullen, Patrick D., Andersen, Melvin E., Chappell, Grace A.
Published in Regulatory toxicology and pharmacology (01.08.2021)
Published in Regulatory toxicology and pharmacology (01.08.2021)
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Journal Article
Addressing systematic inconsistencies between in vitro and in vivo transcriptomic mode of action signatures
McMullen, Patrick D., Pendse, Salil N., Black, Michael B., Mansouri, Kamel, Haider, Saad, Andersen, Melvin E., Clewell, Rebecca A.
Published in Toxicology in vitro (01.08.2019)
Published in Toxicology in vitro (01.08.2019)
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