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Published in Nature protocols (01.10.2018)
Published in Nature protocols (01.10.2018)
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Single-Cell Trajectory Detection Uncovers Progression and Regulatory Coordination in Human B Cell Development
Bendall, Sean C., Davis, Kara L., Amir, El-ad David, Tadmor, Michelle D., Simonds, Erin F., Chen, Tiffany J., Shenfeld, Daniel K., Nolan, Garry P., Pe’er, Dana
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Cytometry by Time-of-Flight Shows Combinatorial Cytokine Expression and Virus-Specific Cell Niches within a Continuum of CD8 + T Cell Phenotypes
Newell, Evan W., Sigal, Natalia, Bendall, Sean C., Nolan, Garry P., Davis, Mark M.
Published in Immunity (Cambridge, Mass.) (27.01.2012)
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Mapping lung cancer epithelial-mesenchymal transition states and trajectories with single-cell resolution
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Published in Nature communications (06.12.2019)
Published in Nature communications (06.12.2019)
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Data-Driven Phenotypic Dissection of AML Reveals Progenitor-like Cells that Correlate with Prognosis
Levine, Jacob H., Simonds, Erin F., Bendall, Sean C., Davis, Kara L., Amir, El-ad D., Tadmor, Michelle D., Litvin, Oren, Fienberg, Harris G., Jager, Astraea, Zunder, Eli R., Finck, Rachel, Gedman, Amanda L., Radtke, Ina, Downing, James R., Pe’er, Dana, Nolan, Garry P.
Published in Cell (02.07.2015)
Published in Cell (02.07.2015)
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viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia
Amir, El-ad David, Davis, Kara L, Tadmor, Michelle D, Simonds, Erin F, Levine, Jacob H, Bendall, Sean C, Shenfeld, Daniel K, Krishnaswamy, Smita, Nolan, Garry P, Pe'er, Dana
Published in Nature biotechnology (01.06.2013)
Published in Nature biotechnology (01.06.2013)
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Post-infusion CAR TReg cells identify patients resistant to CD19-CAR therapy
Good, Zinaida, Spiegel, Jay Y., Sahaf, Bita, Malipatlolla, Meena B., Ehlinger, Zach J., Kurra, Sreevidya, Desai, Moksha H., Reynolds, Warren D., Wong Lin, Anita, Vandris, Panayiotis, Wu, Fang, Prabhu, Snehit, Hamilton, Mark P., Tamaresis, John S., Hanson, Paul J., Patel, Shabnum, Feldman, Steven A., Frank, Matthew J., Baird, John H., Muffly, Lori, Claire, Gursharan K., Craig, Juliana, Kong, Katherine A., Wagh, Dhananjay, Coller, John, Bendall, Sean C., Tibshirani, Robert J., Plevritis, Sylvia K., Miklos, David B., Mackall, Crystal L.
Published in Nature medicine (01.09.2022)
Published in Nature medicine (01.09.2022)
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Glucose Metabolism Drives Histone Acetylation Landscape Transitions that Dictate Muscle Stem Cell Function
Yucel, Nora, Wang, Yu Xin, Mai, Thach, Porpiglia, Ermelinda, Lund, Peder J., Markov, Glenn, Garcia, Benjamin A., Bendall, Sean C., Angelo, Michael, Blau, Helen M.
Published in Cell reports (Cambridge) (25.06.2019)
Published in Cell reports (Cambridge) (25.06.2019)
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Single-Cell Mass Cytometry of Differential Immune and Drug Responses Across a Human Hematopoietic Continuum
Bendall, Sean C., Simonds, Erin F., Qiu, Peng, Amir, El-ad D., Krutzik, Peter O., Finck, Rachel, Bruggner, Robert V., Melamed, Rachel, Trejo, Angelica, Ornatsky, Olga I., Balderas, Robert S., Plevritis, Sylvia K., Sachs, Karen, Pe'er, Dana, Tanner, Scott D., Nolan, Garry P.
Published in Science (American Association for the Advancement of Science) (06.05.2011)
Published in Science (American Association for the Advancement of Science) (06.05.2011)
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Multiplexed mass cytometry profiling of cellular states perturbed by small-molecule regulators
Bodenmiller, Bernd, Zunder, Eli R, Finck, Rachel, Chen, Tiffany J, Savig, Erica S, Bruggner, Robert V, Simonds, Erin F, Bendall, Sean C, Sachs, Karen, Krutzik, Peter O, Nolan, Garry P
Published in Nature biotechnology (01.09.2012)
Published in Nature biotechnology (01.09.2012)
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An interactive reference framework for modeling a dynamic immune system
Spitzer, Matthew H., Gherardini, Pier Federico, Fragiadakis, Gabriela K., Bhattacharya, Nupur, Yuan, Robert T., Hotson, Andrew N., Finck, Rachel, Carmi, Yaron, Zunder, Eli R., Fantl, Wendy J., Bendall, Sean C., Engleman, Edgar G., Nolan, Garry P.
Published in Science (American Association for the Advancement of Science) (10.07.2015)
Published in Science (American Association for the Advancement of Science) (10.07.2015)
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Distinct metabolic states guide maturation of inflammatory and tolerogenic dendritic cells
Adamik, Juraj, Munson, Paul V, Hartmann, Felix J, Combes, Alexis J, Pierre, Philippe, Krummel, Matthew F, Bendall, Sean C, Argüello, Rafael J, Butterfield, Lisa H
Published in Nature communications (02.09.2022)
Published in Nature communications (02.09.2022)
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Assessing basophil activation by using flow cytometry and mass cytometry in blood stored 24 hours before analysis
Mukai, Kaori, PhD, Gaudenzio, Nicolas, PhD, Gupta, Sheena, PhD, Vivanco, Nora, BSc, Bendall, Sean C., PhD, Maecker, Holden T., PhD, Chinthrajah, Rebecca S., MD, Tsai, Mindy, DMSc, Nadeau, Kari C., MD, PhD, Galli, Stephen J., MD
Published in Journal of allergy and clinical immunology (01.03.2017)
Published in Journal of allergy and clinical immunology (01.03.2017)
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Single-cell developmental classification of B cell precursor acute lymphoblastic leukemia at diagnosis reveals predictors of relapse
Good, Zinaida, Sarno, Jolanda, Jager, Astraea, Samusik, Nikolay, Aghaeepour, Nima, Simonds, Erin F, White, Leah, Lacayo, Norman J, Fantl, Wendy J, Fazio, Grazia, Gaipa, Giuseppe, Biondi, Andrea, Tibshirani, Robert, Bendall, Sean C, Nolan, Garry P, Davis, Kara L
Published in Nature medicine (01.04.2018)
Published in Nature medicine (01.04.2018)
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High-resolution myogenic lineage mapping by single-cell mass cytometry
Porpiglia, Ermelinda, Samusik, Nikolay, Ho, Andrew Tri Van, Cosgrove, Benjamin D, Mai, Thach, Davis, Kara L, Jager, Astraea, Nolan, Garry P, Bendall, Sean C, Fantl, Wendy J, Blau, Helen M
Published in Nature cell biology (01.05.2017)
Published in Nature cell biology (01.05.2017)
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MIBI-TOF: A multiplexed imaging platform relates cellular phenotypes and tissue structure
Keren, Leeat, Bosse, Marc, Thompson, Steve, Risom, Tyler, Vijayaragavan, Kausalia, McCaffrey, Erin, Marquez, Diana, Angoshtari, Roshan, Greenwald, Noah F, Fienberg, Harris, Wang, Jennifer, Kambham, Neeraja, Kirkwood, David, Nolan, Garry, Montine, Thomas J, Galli, Stephen J, West, Robert, Bendall, Sean C, Angelo, Michael
Published in Science advances (01.10.2019)
Published in Science advances (01.10.2019)
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Comprehensive Immune Monitoring of Clinical Trials to Advance Human Immunotherapy
Hartmann, Felix J., Babdor, Joel, Gherardini, Pier Federico, Amir, El-Ad D., Jones, Kyle, Sahaf, Bita, Marquez, Diana M., Krutzik, Peter, O’Donnell, Erika, Sigal, Natalia, Maecker, Holden T., Meyer, Everett, Spitzer, Matthew H., Bendall, Sean C.
Published in Cell reports (Cambridge) (16.07.2019)
Published in Cell reports (Cambridge) (16.07.2019)
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Mutant IDH1 Downregulates ATM and Alters DNA Repair and Sensitivity to DNA Damage Independent of TET2
Inoue, Satoshi, Li, Wanda Y., Tseng, Alan, Beerman, Isabel, Elia, Andrew J., Bendall, Sean C., Lemonnier, François, Kron, Ken J., Cescon, David W., Hao, Zhenyue, Lind, Evan F., Takayama, Naoya, Planello, Aline C., Shen, Shu Yi, Shih, Alan H., Larsen, Dana M., Li, Qinxi, Snow, Bryan E., Wakeham, Andrew, Haight, Jillian, Gorrini, Chiara, Bassi, Christian, Thu, Kelsie L., Murakami, Kiichi, Elford, Alisha R., Ueda, Takeshi, Straley, Kimberly, Yen, Katharine E., Melino, Gerry, Cimmino, Luisa, Aifantis, Iannis, Levine, Ross L., De Carvalho, Daniel D., Lupien, Mathieu, Rossi, Derrick J., Nolan, Garry P., Cairns, Rob A., Mak, Tak W.
Published in Cancer cell (08.08.2016)
Published in Cancer cell (08.08.2016)
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