Cancer stemness, intratumoral heterogeneity, and immune response across cancers
Miranda, Alex, Hamilton, Phineas T., Zhang, Allen W., Pattnaik, Swetansu, Becht, Etienne, Mezheyeuski, Artur, Bruun, Jarle, Micke, Patrick, de Reynies, Aurélien, Nelson, Brad H.
Published in Proceedings of the National Academy of Sciences - PNAS (30.04.2019)
Published in Proceedings of the National Academy of Sciences - PNAS (30.04.2019)
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Journal Article
The clinical role of the TME in solid cancer
Giraldo, Nicolas A., Sanchez-Salas, Rafael, Peske, J. David, Vano, Yann, Becht, Etienne, Petitprez, Florent, Validire, Pierre, Ingels, Alexandre, Cathelineau, Xavier, Fridman, Wolf Herman, Sautès-Fridman, Catherine
Published in British journal of cancer (01.01.2019)
Published in British journal of cancer (01.01.2019)
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Journal Article
Estimating the population abundance of tissue-infiltrating immune and stromal cell populations using gene expression
Becht, Etienne, Giraldo, Nicolas A, Lacroix, Laetitia, Buttard, Bénédicte, Elarouci, Nabila, Petitprez, Florent, Selves, Janick, Laurent-Puig, Pierre, Sautès-Fridman, Catherine, Fridman, Wolf H, de Reyniès, Aurélien
Published in Genome Biology (20.10.2016)
Published in Genome Biology (20.10.2016)
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Journal Article
Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer
Meylan, Maxime, Petitprez, Florent, Becht, Etienne, Bougoüin, Antoine, Pupier, Guilhem, Calvez, Anne, Giglioli, Ilenia, Verkarre, Virginie, Lacroix, Guillaume, Verneau, Johanna, Sun, Chen-Ming, Laurent-Puig, Pierre, Vano, Yann-Alexandre, Elaïdi, Reza, Méjean, Arnaud, Sanchez-Salas, Rafaël, Barret, Eric, Cathelineau, Xavier, Oudard, Stephane, Reynaud, Claude-Agnès, de Reyniès, Aurélien, Sautès-Fridman, Catherine, Fridman, Wolf Herman
Published in Immunity (Cambridge, Mass.) (08.03.2022)
Published in Immunity (Cambridge, Mass.) (08.03.2022)
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Journal Article
Orchestrating single-cell analysis with Bioconductor
Amezquita, Robert A., Lun, Aaron T. L., Becht, Etienne, Carey, Vince J., Carpp, Lindsay N., Geistlinger, Ludwig, Marini, Federico, Rue-Albrecht, Kevin, Risso, Davide, Soneson, Charlotte, Waldron, Levi, Pagès, Hervé, Smith, Mike L., Huber, Wolfgang, Morgan, Martin, Gottardo, Raphael, Hicks, Stephanie C.
Published in Nature methods (01.02.2020)
Published in Nature methods (01.02.2020)
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Journal Article
Tumor-Infiltrating and Peripheral Blood T-cell Immunophenotypes Predict Early Relapse in Localized Clear Cell Renal Cell Carcinoma
Giraldo, Nicolas A, Becht, Etienne, Vano, Yann, Petitprez, Florent, Lacroix, Laetitia, Validire, Pierre, Sanchez-Salas, Rafael, Ingels, Alexandre, Oudard, Stephane, Moatti, Audrey, Buttard, Benedicte, Bourass, Sarah, Germain, Claire, Cathelineau, Xavier, Fridman, Wolf H, Sautès-Fridman, Catherine
Published in Clinical cancer research (01.08.2017)
Published in Clinical cancer research (01.08.2017)
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Journal Article
Single-Cell Analysis of Human Mononuclear Phagocytes Reveals Subset-Defining Markers and Identifies Circulating Inflammatory Dendritic Cells
Dutertre, Charles-Antoine, Becht, Etienne, Irac, Sergio Erdal, Khalilnezhad, Ahad, Narang, Vipin, Khalilnezhad, Shabnam, Ng, Pei Y., van den Hoogen, Lucas L., Leong, Jing Yao, Lee, Bernett, Chevrier, Marion, Zhang, Xiao Meng, Yong, Pearly Jean Ai, Koh, Geraldine, Lum, Josephine, Howland, Shanshan Wu, Mok, Esther, Chen, Jinmiao, Larbi, Anis, Tan, Henry Kun Kiaang, Lim, Tony Kiat Hon, Karagianni, Panagiota, Tzioufas, Athanasios G., Malleret, Benoit, Brody, Joshua, Albani, Salvatore, van Roon, Joel, Radstake, Timothy, Newell, Evan W., Ginhoux, Florent
Published in Immunity (Cambridge, Mass.) (17.09.2019)
Published in Immunity (Cambridge, Mass.) (17.09.2019)
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Journal Article
Orchestration and Prognostic Significance of Immune Checkpoints in the Microenvironment of Primary and Metastatic Renal Cell Cancer
Giraldo, Nicolas A, Becht, Etienne, Pagès, Franck, Skliris, Georgios, Verkarre, Virginie, Vano, Yann, Mejean, Arnaud, Saint-Aubert, Nicolas, Lacroix, Laetitia, Natario, Ivo, Lupo, Audrey, Alifano, Marco, Damotte, Diane, Cazes, Aurelie, Triebel, Frederic, Freeman, Gordon J, Dieu-Nosjean, Marie-Caroline, Oudard, Stephane, Fridman, Wolf H, Sautès-Fridman, Catherine
Published in Clinical cancer research (01.07.2015)
Published in Clinical cancer research (01.07.2015)
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Journal Article
Plasmacytoid dendritic cells develop from Ly6D+ lymphoid progenitors distinct from the myeloid lineage
Dress, Regine J., Dutertre, Charles-Antoine, Giladi, Amir, Schlitzer, Andreas, Low, Ivy, Shadan, Nurhidaya Binte, Tay, Alicia, Lum, Josephine, Kairi, Muhammad Faris Bin Mohd, Hwang, You Yi, Becht, Etienne, Cheng, Yang, Chevrier, Marion, Larbi, Anis, Newell, Evan W., Amit, Ido, Chen, Jinmiao, Ginhoux, Florent
Published in Nature immunology (01.07.2019)
Published in Nature immunology (01.07.2019)
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Journal Article
Aggregating transcript-level analyses for single-cell differential gene expression
Becht, Etienne, Zhao, Edward, Amezquita, Robert, Gottardo, Raphael
Published in Nature methods (01.06.2020)
Published in Nature methods (01.06.2020)
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Journal Article
Lung endothelial cell antigen cross-presentation to CD8+T cells drives malaria-associated lung injury
Claser, Carla, Nguee, Samantha Yee Teng, Balachander, Akhila, Wu Howland, Shanshan, Becht, Etienne, Gunasegaran, Bavani, Hartimath, Siddesh V., Lee, Audrey W. Q., Theng Theng Ho, Jacqueline, Bing Ong, Chee, Newell, Evan W., Goggi, Julian, Guan Ng, Lai, Renia, Laurent
Published in Nature communications (18.09.2019)
Published in Nature communications (18.09.2019)
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Journal Article
The murine Microenvironment Cell Population counter method to estimate abundance of tissue-infiltrating immune and stromal cell populations in murine samples using gene expression
Petitprez, Florent, Levy, Sacha, Sun, Cheng-Ming, Meylan, Maxime, Linhard, Christophe, Becht, Etienne, Elarouci, Nabila, Tavel, David, Roumenina, Lubka T, Ayadi, Mira, Sautès-Fridman, Catherine, Fridman, Wolf H, de Reyniès, Aurélien
Published in Genome medicine (06.10.2020)
Published in Genome medicine (06.10.2020)
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Journal Article
Late-differentiated effector neoantigen-specific CD8+ T cells are enriched in peripheral blood of non-small cell lung carcinoma patients responding to atezolizumab treatment
Fehlings, Michael, Jhunjhunwala, Suchit, Kowanetz, Marcin, O’Gorman, William E., Hegde, Priti S., Sumatoh, Hermi, Lee, Boon Heng, Nardin, Alessandra, Becht, Etienne, Flynn, Susan, Ballinger, Marcus, Newell, Evan W., Yadav, Mahesh
Published in Journal for immunotherapy of cancer (12.09.2019)
Published in Journal for immunotherapy of cancer (12.09.2019)
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Journal Article
High-throughput single-cell quantification of hundreds of proteins using conventional flow cytometry and machine learning
Becht, Etienne, Tolstrup, Daniel, Dutertre, Charles-Antoine, Morawski, Peter A, Campbell, Daniel J, Ginhoux, Florent, Newell, Evan W, Gottardo, Raphael, Headley, Mark B
Published in Science advances (24.09.2021)
Published in Science advances (24.09.2021)
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Journal Article
Characterization of CD4 + and CD8 + T cells responses in the mixed lymphocyte reaction by flow cytometry and single cell RNA sequencing
Mangelinck, Adèle, Dubuisson, Agathe, Becht, Etienne, Dromaint-Catesson, Sandra, Fasquel, Manon, Provost, Nicolas, Walas, Dawid, Darville, Hélène, Galizzi, Jean-Pierre, Lefebvre, Céline, Blanc, Véronique, Lombardi, Vincent
Published in Frontiers in immunology (2023)
Published in Frontiers in immunology (2023)
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Journal Article
Crosstalk between CD64+MHCII+ macrophages and CD4+ T cells drives joint pathology during chikungunya
Lum, Fok-Moon, Chan, Yi-Hao, Teo, Teck-Hui, Becht, Etienne, Amrun, Siti Naqiah, Teng, Karen WW, Hartimath, Siddesh V, Yeo, Nicholas KW, Yee, Wearn-Xin, Ang, Nicholas, Torres-Ruesta, Anthony M, Fong, Siew-Wai, Goggi, Julian L, Newell, Evan W, Renia, Laurent, Carissimo, Guillaume, Ng, Lisa FP
Published in EMBO molecular medicine (14.03.2024)
Published in EMBO molecular medicine (14.03.2024)
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Journal Article
Expression of LLT1 and its receptor CD161 in lung cancer is associated with better clinical outcome
Braud, Véronique M., Biton, Jérôme, Becht, Etienne, Knockaert, Samantha, Mansuet-Lupo, Audrey, Cosson, Estelle, Damotte, Diane, Alifano, Marco, Validire, Pierre, Anjuère, Fabienne, Cremer, Isabelle, Girard, Nicolas, Gossot, Dominique, Seguin-Givelet, Agathe, Dieu-Nosjean, Marie-Caroline, Germain, Claire
Published in Oncoimmunology (01.01.2018)
Published in Oncoimmunology (01.01.2018)
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Journal Article
Mutating chikungunya virus non‐structural protein produces potent live‐attenuated vaccine candidate
Chan, Yi‐Hao, Teo, Teck‐Hui, Utt, Age, Tan, Jeslin JL, Amrun, Siti Naqiah, Abu Bakar, Farhana, Yee, Wearn‐Xin, Becht, Etienne, Lee, Cheryl Yi‐Pin, Lee, Bernett, Rajarethinam, Ravisankar, Newell, Evan, Merits, Andres, Carissimo, Guillaume, Lum, Fok‐Moon, Ng, Lisa FP
Published in EMBO molecular medicine (01.06.2019)
Published in EMBO molecular medicine (01.06.2019)
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Journal Article
Publisher Correction: Orchestrating single-cell analysis with Bioconductor
Amezquita, Robert A., Lun, Aaron T. L., Becht, Etienne, Carey, Vince J., Carpp, Lindsay N., Geistlinger, Ludwig, Marini, Federico, Rue-Albrecht, Kevin, Risso, Davide, Soneson, Charlotte, Waldron, Levi, Pagès, Hervé, Smith, Mike L., Huber, Wolfgang, Morgan, Martin, Gottardo, Raphael, Hicks, Stephanie C.
Published in Nature methods (01.02.2020)
Published in Nature methods (01.02.2020)
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Journal Article
Author Correction: Lung endothelial cell antigen cross-presentation to CD8+T cells drives malaria-associated lung injury
Claser, Carla, Nguee, Samantha Yee Teng, Balachander, Akhila, Howland, Shanshan Wu, Becht, Etienne, Gunasegaran, Bavani, Hartimath, Siddesh V., Lee, Audrey W. Q., Ho, Jacqueline Theng Theng, Ong, Chee Bing, Newell, Evan W., Goggi, Julian, Ng, Lai Guan, Renia, Laurent
Published in Nature communications (04.11.2019)
Published in Nature communications (04.11.2019)
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