Simultaneous enumeration of cancer and immune cell types from bulk tumor gene expression data
Racle, Julien, de Jonge, Kaat, Baumgaertner, Petra, Speiser, Daniel E, Gfeller, David
Published in eLife (13.11.2017)
Published in eLife (13.11.2017)
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Journal Article
Ipilimumab-dependent cell-mediated cytotoxicity of regulatory T cells ex vivo by nonclassical monocytes in melanoma patients
Romano, Emanuela, Kusio-Kobialka, Monika, Foukas, Periklis G., Baumgaertner, Petra, Meyer, Christiane, Ballabeni, Pierluigi, Michielin, Olivier, Weide, Benjamin, Romero, Pedro, Speiser, Daniel E.
Published in Proceedings of the National Academy of Sciences - PNAS (12.05.2015)
Published in Proceedings of the National Academy of Sciences - PNAS (12.05.2015)
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Journal Article
Sensitive identification of neoantigens and cognate TCRs in human solid tumors
Arnaud, Marion, Chiffelle, Johanna, Genolet, Raphael, Navarro Rodrigo, Blanca, Perez, Marta A. S., Huber, Florian, Magnin, Morgane, Nguyen-Ngoc, Tu, Guillaume, Philippe, Baumgaertner, Petra, Chong, Chloe, Stevenson, Brian J., Gfeller, David, Irving, Melita, Speiser, Daniel E., Schmidt, Julien, Zoete, Vincent, Kandalaft, Lana E., Bassani-Sternberg, Michal, Bobisse, Sara, Coukos, George, Harari, Alexandre
Published in Nature biotechnology (01.05.2022)
Published in Nature biotechnology (01.05.2022)
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Journal Article
Neoantigen-specific CD8 T cells with high structural avidity preferentially reside in and eliminate tumors
Schmidt, Julien, Chiffelle, Johanna, Perez, Marta A. S., Magnin, Morgane, Bobisse, Sara, Arnaud, Marion, Genolet, Raphael, Cesbron, Julien, Barras, David, Navarro Rodrigo, Blanca, Benedetti, Fabrizio, Michel, Alexandra, Queiroz, Lise, Baumgaertner, Petra, Guillaume, Philippe, Hebeisen, Michael, Michielin, Olivier, Nguyen-Ngoc, Tu, Huber, Florian, Irving, Melita, Tissot-Renaud, Stéphanie, Stevenson, Brian J., Rusakiewicz, Sylvie, Dangaj Laniti, Denarda, Bassani-Sternberg, Michal, Rufer, Nathalie, Gfeller, David, Kandalaft, Lana E., Speiser, Daniel E., Zoete, Vincent, Coukos, George, Harari, Alexandre
Published in Nature communications (06.06.2023)
Published in Nature communications (06.06.2023)
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Journal Article
Extended co-expression of inhibitory receptors by human CD8 T-cells depending on differentiation, antigen-specificity and anatomical localization
Baitsch, Lukas, Legat, Amandine, Barba, Leticia, Fuertes Marraco, Silvia A, Rivals, Jean-Paul, Baumgaertner, Petra, Christiansen-Jucht, Céline, Bouzourene, Hanifa, Rimoldi, Donata, Pircher, Hanspeter, Rufer, Nathalie, Matter, Maurice, Michielin, Olivier, Speiser, Daniel E
Published in PloS one (08.02.2012)
Published in PloS one (08.02.2012)
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Journal Article
Very Late Antigen-1 Marks Functional Tumor-Resident CD8 T Cells and Correlates with Survival of Melanoma Patients
Murray, Timothy, Fuertes Marraco, Silvia A, Baumgaertner, Petra, Bordry, Natacha, Cagnon, Laurène, Donda, Alena, Romero, Pedro, Verdeil, Grégory, Speiser, Daniel E
Published in Frontiers in immunology (12.12.2016)
Published in Frontiers in immunology (12.12.2016)
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Journal Article
CD8 T cell function and cross-reactivity explored by stepwise increased peptide-HLA versus TCR affinity
Baumgaertner, Petra, Schmidt, Julien, Costa-Nunes, Carla-Marisa, Bordry, Natacha, Guillaume, Philippe, Luescher, Immanuel, Speiser, Daniel E, Rufer, Nathalie, Hebeisen, Michael
Published in Frontiers in immunology (10.08.2022)
Published in Frontiers in immunology (10.08.2022)
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Journal Article
Inflammatory B cells correlate with failure to checkpoint blockade in melanoma patients
de Jonge, Kaat, Tillé, Laure, Lourenco, Joao, Maby-El Hajjami, Hélène, Nassiri, Sina, Racle, Julien, Gfeller, David, Delorenzi, Mauro, Verdeil, Grégory, Baumgaertner, Petra, Speiser, Daniel E.
Published in Oncoimmunology (01.01.2021)
Published in Oncoimmunology (01.01.2021)
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Journal Article
Unmodified self antigen triggers human CD8 T cells with stronger tumor reactivity than altered antigen
Speiser, Daniel E, Baumgaertner, Petra, Voelter, Verena, Devevre, Estelle, Barbey, Catherine, Rufer, Nathalie, Romero, Pedro
Published in Proceedings of the National Academy of Sciences - PNAS (11.03.2008)
Published in Proceedings of the National Academy of Sciences - PNAS (11.03.2008)
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Journal Article
Rapid and Continued T-Cell Differentiation into Long-term Effector and Memory Stem Cells in Vaccinated Melanoma Patients
Gannon, Philippe O, Baumgaertner, Petra, Huber, Alexandre, Iancu, Emanuela M, Cagnon, Laurène, Abed Maillard, Samia, Maby-El Hajjami, Hélène, Speiser, Daniel E, Rufer, Nathalie
Published in Clinical cancer research (01.07.2017)
Published in Clinical cancer research (01.07.2017)
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Journal Article
Unsupervised Analysis of Flow Cytometry Data in a Clinical Setting Captures Cell Diversity and Allows Population Discovery
Baumgaertner, Petra, Sankar, Martial, Herrera, Fernanda, Benedetti, Fabrizio, Barras, David, Thierry, Anne-Christine, Dangaj, Denarda, Kandalaft, Lana E, Coukos, George, Xenarios, Ioannis, Guex, Nicolas, Harari, Alexandre
Published in Frontiers in immunology (30.04.2021)
Published in Frontiers in immunology (30.04.2021)
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Journal Article
High Peptide Dose Vaccination Promotes the Early Selection of Tumor Antigen-Specific CD8 T-Cells of Enhanced Functional Competence
Carretero-Iglesia, Laura, Couturaud, Barbara, Baumgaertner, Petra, Schmidt, Julien, Maby-El Hajjami, Hélène, Speiser, Daniel E, Hebeisen, Michael, Rufer, Nathalie
Published in Frontiers in immunology (08.01.2020)
Published in Frontiers in immunology (08.01.2020)
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Journal Article
Broad and Conserved Immune Regulation by Genetically Heterogeneous Melanoma Cells
Neubert, Natalie J, Tillé, Laure, Barras, David, Soneson, Charlotte, Baumgaertner, Petra, Rimoldi, Donata, Gfeller, David, Delorenzi, Mauro, Fuertes Marraco, Silvia A, Speiser, Daniel E
Published in Cancer research (Chicago, Ill.) (01.04.2017)
Published in Cancer research (Chicago, Ill.) (01.04.2017)
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Journal Article
Explaining juvenile idiopathic arthritis to paediatric patients using illustrations and easy-to-read texts: improvement of disease knowledge and adherence to treatment
Reiser, Christiane, Zeltner, Nina A., Rettenbacher, Beatrix, Baumgaertner, Petra, Huemer, Martina, Huemer, Christian
Published in Pediatric Rheumatology (08.11.2021)
Published in Pediatric Rheumatology (08.11.2021)
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Journal Article
Lymphatic vessel density is associated with CD8+ T cell infiltration and immunosuppressive factors in human melanoma
Bordry, Natacha, Broggi, Maria A. S., de Jonge, Kaat, Schaeuble, Karin, Gannon, Philippe O., Foukas, Periklis G., Danenberg, Esther, Romano, Emanuela, Baumgaertner, Petra, Fankhauser, Manuel, Wald, Noémie, Cagnon, Laurène, Abed-Maillard, Samia, Hajjami, Hélène Maby-El, Murray, Timothy, Ioannidou, Kalliopi, Letovanec, Igor, Yan, Pu, Michielin, Olivier, Matter, Maurice, Swartz, Melody A., Speiser, Daniel E.
Published in Oncoimmunology (01.01.2018)
Published in Oncoimmunology (01.01.2018)
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Journal Article
A Personalized Neoantigen Vaccine in Combination with Platinum-Based Chemotherapy Induces a T-Cell Response Coinciding with a Complete Response in Endometrial Carcinoma
Harari, Alexandre, Sarivalasis, Apostolos, de Jonge, Kaat, Thierry, Anne-Christine, Huber, Florian, Boudousquie, Caroline, Rossier, Laetitia, Orcurto, Angela, Imbimbo, Martina, Baumgaertner, Petra, Bassani-Sternberg, Michal, Kandalaft, Lana E
Published in Cancers (18.11.2021)
Published in Cancers (18.11.2021)
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Journal Article
Low Avidity T Cells Do Not Hinder High Avidity T Cell Responses Against Melanoma
Ioannidou, Kalliopi, Randin, Olivier, Semilietof, Aikaterini, Maby-El Hajjami, Hélène, Baumgaertner, Petra, Vanhecke, Dominique, Speiser, Daniel E
Published in Frontiers in immunology (06.09.2019)
Published in Frontiers in immunology (06.09.2019)
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Journal Article
A Well-Controlled Experimental System to Study Interactions of Cytotoxic T Lymphocytes with Tumor Cells
Neubert, Natalie J, Soneson, Charlotte, Barras, David, Baumgaertner, Petra, Rimoldi, Donata, Delorenzi, Mauro, Fuertes Marraco, Silvia A, Speiser, Daniel E
Published in Frontiers in immunology (30.08.2016)
Published in Frontiers in immunology (30.08.2016)
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Journal Article
Differentiation associated regulation of microRNA expression in vivo in human CD8+ T cell subsets
Salaun, Bruno, Yamamoto, Takuya, Badran, Bassam, Tsunetsugu-Yokota, Yasuko, Roux, Antoine, Baitsch, Lukas, Rouas, Redouane, Fayyad-Kazan, Hussein, Baumgaertner, Petra, Devevre, Estelle, Ramesh, Anirudh, Braun, Marion, Speiser, Daniel, Autran, Brigitte, Martiat, Philippe, Appay, Victor, Romero, Pedro
Published in Journal of translational medicine (20.04.2011)
Published in Journal of translational medicine (20.04.2011)
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Journal Article