Characterizing the tumor microenvironment of metastatic ovarian cancer by single-cell transcriptomics
Olalekan, Susan, Xie, Bingqing, Back, Rebecca, Eckart, Heather, Basu, Anindita
Published in Cell reports (Cambridge) (25.05.2021)
Published in Cell reports (Cambridge) (25.05.2021)
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Journal Article
Systematic Comparison of High-throughput Single-Cell and Single-Nucleus Transcriptomes during Cardiomyocyte Differentiation
Selewa, Alan, Dohn, Ryan, Eckart, Heather, Lozano, Stephanie, Xie, Bingqing, Gauchat, Eric, Elorbany, Reem, Rhodes, Katherine, Burnett, Jonathan, Gilad, Yoav, Pott, Sebastian, Basu, Anindita
Published in Scientific reports (30.01.2020)
Published in Scientific reports (30.01.2020)
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Journal Article
High-throughput RNA sequencing of paraformaldehyde-fixed single cells
Phan, Hoang Van, van Gent, Michiel, Drayman, Nir, Basu, Anindita, Gack, Michaela U, Tay, Savaş
Published in Nature communications (24.09.2021)
Published in Nature communications (24.09.2021)
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Journal Article
Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets
Macosko, Evan Z., Basu, Anindita, Satija, Rahul, Nemesh, James, Shekhar, Karthik, Goldman, Melissa, Tirosh, Itay, Bialas, Allison R., Kamitaki, Nolan, Martersteck, Emily M., Trombetta, John J., Weitz, David A., Sanes, Joshua R., Shalek, Alex K., Regev, Aviv, McCarroll, Steven A.
Published in Cell (21.05.2015)
Published in Cell (21.05.2015)
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Journal Article
Computational modeling of the cephalic arch predicts hemodynamic profiles in patients with brachiocephalic fistula access receiving hemodialysis
Hammes, Mary, Moya-Rodriguez, Andres, Bernstein, Cameron, Nathan, Sandeep, Navuluri, Rakesh, Basu, Anindita
Published in PloS one (14.07.2021)
Published in PloS one (14.07.2021)
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Journal Article
Single-cell genomics improves the discovery of risk variants and genes of atrial fibrillation
Selewa, Alan, Luo, Kaixuan, Wasney, Michael, Smith, Linsin, Sun, Xiaotong, Tang, Chenwei, Eckart, Heather, Moskowitz, Ivan P, Basu, Anindita, He, Xin, Pott, Sebastian
Published in Nature communications (17.08.2023)
Published in Nature communications (17.08.2023)
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Journal Article
High-Throughput Single-Cell Labeling (Hi-SCL) for RNA-Seq Using Drop-Based Microfluidics
Rotem, Assaf, Ram, Oren, Shoresh, Noam, Sperling, Ralph A, Schnall-Levin, Michael, Zhang, Huidan, Basu, Anindita, Bernstein, Bradley E, Weitz, David A
Published in PloS one (22.05.2015)
Published in PloS one (22.05.2015)
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Journal Article
Rheology of soft colloids across the onset of rigidity: scaling behavior, thermal, and non-thermal responses
Basu, Anindita, Xu, Ye, Still, Tim, Arratia, P E, Zhang, Zexin, Nordstrom, K N, Rieser, Jennifer M, Gollub, J P, Durian, D J, Yodh, A G
Published in Soft matter (07.05.2014)
Published in Soft matter (07.05.2014)
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Journal Article
Exploring the tumor micro-environment in primary and metastatic tumors of different ovarian cancer histotypes
Xie, Bingqing, Olalekan, Susan, Back, Rebecca, Ashitey, Naa Asheley, Eckart, Heather, Basu, Anindita
Published in Frontiers in cell and developmental biology (24.01.2024)
Published in Frontiers in cell and developmental biology (24.01.2024)
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Journal Article
Bile acid fitness determinants of a Bacteroides fragilis isolate from a human pouchitis patient
Fiebig, Aretha, Schnizlein, Matthew K, Pena-Rivera, Selymar, Trigodet, Florian, Dubey, Abhishek Anil, Hennessy, Miette K, Basu, Anindita, Pott, Sebastian, Dalal, Sushila, Rubin, David, Sogin, Mitchell L, Eren, A Murat, Chang, Eugene B, Crosson, Sean
Published in mBio (16.01.2024)
Published in mBio (16.01.2024)
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Journal Article
Rapid, targeted and culture-free viral infectivity assay in drop-based microfluidics
Tao, Ye, Rotem, Assaf, Zhang, Huidan, Chang, Connie B, Basu, Anindita, Kolawole, Abimbola O, Koehler, Stephan A, Ren, Yukun, Lin, Jeffrey S, Pipas, James M, Feldman, Andrew B, Wobus, Christiane E, Weitz, David A
Published in Lab on a Chip (01.01.2015)
Published in Lab on a Chip (01.01.2015)
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Journal Article
Web Resource
mDrop-Seq: Massively Parallel Single-Cell RNA-Seq of Saccharomyces cerevisiae and Candida albicans
Dohn, Ryan, Xie, Bingqing, Back, Rebecca, Selewa, Alan, Eckart, Heather, Rao, Reeta Prusty, Basu, Anindita
Published in Vaccines (Basel) (27.12.2021)
Published in Vaccines (Basel) (27.12.2021)
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Journal Article
Creating patient-specific vein models to characterize wall shear stress in hemodialysis population
Moya-Rodríguez, Andrés, Xie, Bingqing, Cook, Dylan, Klineberg, Maren, Nathan, Sandeep, Hammes, Mary, Basu, Anindita
Published in Computational and structural biotechnology journal (01.01.2022)
Published in Computational and structural biotechnology journal (01.01.2022)
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Journal Article
Massively parallel single-nucleus RNA-seq with DroNc-seq
Habib, Naomi, Avraham-Davidi, Inbal, Basu, Anindita, Burks, Tyler, Shekhar, Karthik, Hofree, Matan, Choudhury, Sourav R, Aguet, François, Gelfand, Ellen, Ardlie, Kristin, Weitz, David A, Rozenblatt-Rosen, Orit, Zhang, Feng, Regev, Aviv
Published in Nature methods (01.10.2017)
Published in Nature methods (01.10.2017)
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Journal Article
Taking time to compose thoughts with prefrontal schemata
Ryom, Kwang Il, Basu, Anindita, Stendardi, Debora, Ciaramelli, Elisa, Treves, Alessandro
Published in Experimental brain research (01.05.2024)
Published in Experimental brain research (01.05.2024)
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Journal Article