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Published in Nature methods (01.11.2021)
Published in Nature methods (01.11.2021)
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DeepConsensus improves the accuracy of sequences with a gap-aware sequence transformer
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Published in Nature biotechnology (01.02.2023)
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Published in The New England journal of medicine (17.02.2022)
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Journal Article
Haplotype-aware variant calling enables high accuracy in nanopore long-reads using deep neural networks
Shafin, Kishwar, Pesout, Trevor, Pi-Chuan Chang, Nattestad, Maria, Kolesnikov, Alexey, Goel, Sidharth, Baid, Gunjan, Eizenga, Jordan M, Miga, Karen H, Carnevali, Paolo, Jain, Miten, Carroll, Andrew, Paten, Benedict
Published in bioRxiv (05.03.2021)
Published in bioRxiv (05.03.2021)
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Accelerated identification of disease-causing variants with ultra-rapid nanopore genome sequencing
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Published in Nature biotechnology (01.07.2022)
Published in Nature biotechnology (01.07.2022)
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Year of Publication 14.05.2024
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Year of Publication 14.05.2024
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Published in Cell genomics (11.05.2022)
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Published in Cell genomics (11.05.2022)
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Year of Publication 21.06.2022
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Year of Publication 10.07.2024
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Year of Publication 01.05.2024
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Year of Publication 18.04.2024
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Year of Publication 04.04.2024
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Year of Publication 13.04.2023
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Year of Publication 13.04.2023
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Year of Publication 13.04.2023
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Year of Publication 13.04.2023
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SEQUENCE ERROR CORRECTION USING NEURAL NETWORKS
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Year of Publication 02.03.2023
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Year of Publication 02.03.2023
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Yu, Jiahui, Xu, Yuanzhong, Jing Yu Koh, Luong, Thang, Baid, Gunjan, Wang, Zirui, Vasudevan, Vijay, Ku, Alexander, Yang, Yinfei, Ayan, Burcu Karagol, Hutchinson, Ben, Han, Wei, Parekh, Zarana, Li, Xin, Zhang, Han, Baldridge, Jason, Wu, Yonghui
Published in arXiv.org (22.06.2022)
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Published in arXiv.org (22.06.2022)
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precisionFDA Truth Challenge V2: Calling variants from short- and long-reads in difficult-to-map regions
Olson, Nathan D, Wagner, Justin, Mcdaniel, Jennifer, Stephens, Sarah H, Westreich, Samuel T, Prasanna, Anish G, Johanson, Elaine, Boja, Emily, Maier, Ezekiel J, Serang, Omar, Jáspez, David, Lorenzo-Salazar, José M, Muñoz-Barrera, Adrián, Rubio-Rodríguez, Luis A, Flores, Carlos, Kyriakidis, Konstantinos, Malousi, Andigoni, Shafin, Kishwar, Pesout, Trevor, Jain, Miten, Paten, Benedict, Pi-Chuan Chang, Kolesnikov, Alexey, Nattestad, Maria, Baid, Gunjan, Goel, Sidharth, Yang, Howard, Carroll, Andrew, Eveleigh, Robert, Bourgey, Mathieu, Bourque, Guillaume, Li, Gen, Ma Chouxian, Tang, Linqi, Du Yuanping, Zhang, Shaowei, Morata, Jordi, Tonda, Raúl, Parra, Genís, Jean-Rémi Trotta, Brueffer, Christian, Demirkaya-Budak, Sinem, Kabakci-Zorlu, Duygu, Turgut, Deniz, Kalay, Özem, Budak, Gungor, Narcı, Kübra, Arslan, Elif, Brown, Richard, Johnson, Ivan J, Dolgoborodov, Alexey, Semenyuk, Vladimir, Jain, Amit, Tetikol, H Serhat, Jain, Varun, Ruehle, Mike, Lajoie, Bryan, Cooper, Roddey, Catreux, Severine, Mehio, Rami, Mian Umair Ahsan, Liu, Qian, Wang, Kai, Sayed Mohammad Ebrahim Sahraeian, Li Tai Fang, Marghoob Mohiyuddin, Hung, Calvin, Jain, Chirag, Feng, Hanying, Li, Zhipan, Chen, Luoqi, Sedlazeck, Fritz J, Zook, Justin M
Published in bioRxiv (15.11.2020)
Published in bioRxiv (15.11.2020)
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