The Pioneer Transcription Factor FoxA Maintains an Accessible Nucleosome Configuration at Enhancers for Tissue-Specific Gene Activation
Iwafuchi-Doi, Makiko, Donahue, Greg, Kakumanu, Akshay, Watts, Jason A., Mahony, Shaun, Pugh, B. Franklin, Lee, Dolim, Kaestner, Klaus H., Zaret, Kenneth S.
Published in Molecular cell (07.04.2016)
Published in Molecular cell (07.04.2016)
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Genome-wide Nucleosome Specificity and Directionality of Chromatin Remodelers
Yen, Kuangyu, Vinayachandran, Vinesh, Batta, Kiran, Koerber, R. Thomas, Pugh, B. Franklin
Published in Cell (22.06.2012)
Published in Cell (22.06.2012)
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Simplified ChIP-exo assays
Rossi, Matthew J., Lai, William K. M., Pugh, B. Franklin
Published in Nature communications (20.07.2018)
Published in Nature communications (20.07.2018)
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Phase separation directs ubiquitination of gene-body nucleosomes
Gallego, Laura D., Schneider, Maren, Mittal, Chitvan, Romanauska, Anete, Gudino Carrillo, Ricardo M., Schubert, Tobias, Pugh, B. Franklin, Köhler, Alwin
Published in Nature (London) (01.03.2020)
Published in Nature (London) (01.03.2020)
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Genome-wide function of H2B ubiquitylation in promoter and genic regions
Batta, Kiran, Zhang, Zhenhai, Yen, Kuangyu, Goffman, David B, Pugh, B Franklin
Published in Genes & development (01.11.2011)
Published in Genes & development (01.11.2011)
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The Nuclear Pore-Associated TREX-2 Complex Employs Mediator to Regulate Gene Expression
Schneider, Maren, Hellerschmied, Doris, Schubert, Tobias, Amlacher, Stefan, Vinayachandran, Vinesh, Reja, Rohit, Pugh, B. Franklin, Clausen, Tim, Köhler, Alwin
Published in Cell (27.08.2015)
Published in Cell (27.08.2015)
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Molecular mechanisms of ribosomal protein gene coregulation
Reja, Rohit, Vinayachandran, Vinesh, Ghosh, Sujana, Pugh, B Franklin
Published in Genes & development (15.09.2015)
Published in Genes & development (15.09.2015)
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A high-resolution protein architecture of the budding yeast genome
Rossi, Matthew J., Kuntala, Prashant K., Lai, William K. M., Yamada, Naomi, Badjatia, Nitika, Mittal, Chitvan, Kuzu, Guray, Bocklund, Kylie, Farrell, Nina P., Blanda, Thomas R., Mairose, Joshua D., Basting, Ann V., Mistretta, Katelyn S., Rocco, David J., Perkinson, Emily S., Kellogg, Gretta D., Mahony, Shaun, Pugh, B. Franklin
Published in Nature (London) (08.04.2021)
Published in Nature (London) (08.04.2021)
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A Packing Mechanism for Nucleosome Organization Reconstituted Across a Eukaryotic Genome
Zhang, Zhenhai, Wippo, Christian J., Wal, Megha, Ward, Elissa, Korber, Philipp, Pugh, B. Franklin
Published in Science (American Association for the Advancement of Science) (20.05.2011)
Published in Science (American Association for the Advancement of Science) (20.05.2011)
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Nucleosome positions predicted through comparative genomics
Pugh, B Franklin, Ioshikhes, Ilya P, Albert, Istvan, Zanton, Sara J
Published in Nature genetics (01.10.2006)
Published in Nature genetics (01.10.2006)
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Nucleosome organization in the Drosophila genome
Pugh, B. Franklin, Mavrich, Travis N, Jiang, Cizhong, Ioshikhes, Ilya P, Li, Xiaoyong, Venters, Bryan J, Zanton, Sara J, Tomsho, Lynn P, Qi, Ji, Glaser, Robert L, Schuster, Stephan C, Gilmour, David S, Albert, Istvan
Published in Nature (15.05.2008)
Published in Nature (15.05.2008)
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