Deep Learning-Based Segmentation and Quantification in Experimental Kidney Histopathology
Bouteldja, Nassim, Klinkhammer, Barbara M, Bülow, Roman D, Droste, Patrick, Otten, Simon W, Freifrau von Stillfried, Saskia, Moellmann, Julia, Sheehan, Susan M, Korstanje, Ron, Menzel, Sylvia, Bankhead, Peter, Mietsch, Matthias, Drummer, Charis, Lehrke, Michael, Kramann, Rafael, Floege, Jürgen, Boor, Peter, Merhof, Dorit
Published in Journal of the American Society of Nephrology (01.01.2021)
Published in Journal of the American Society of Nephrology (01.01.2021)
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Journal Article
Next-Generation Morphometry for pathomics-data mining in histopathology
Hölscher, David L., Bouteldja, Nassim, Joodaki, Mehdi, Russo, Maria L., Lan, Yu-Chia, Sadr, Alireza Vafaei, Cheng, Mingbo, Tesar, Vladimir, Stillfried, Saskia V., Klinkhammer, Barbara M., Barratt, Jonathan, Floege, Jürgen, Roberts, Ian S. D., Coppo, Rosanna, Costa, Ivan G., Bülow, Roman D., Boor, Peter
Published in Nature communications (28.01.2023)
Published in Nature communications (28.01.2023)
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Journal Article
tRigon: an R package and Shiny App for integrative (path-)omics data analysis
Hölscher, David L, Goedertier, Michael, Klinkhammer, Barbara M, Droste, Patrick, Costa, Ivan G, Boor, Peter, Bülow, Roman D
Published in BMC bioinformatics (05.03.2024)
Published in BMC bioinformatics (05.03.2024)
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Journal Article
Deep learning-based classification of kidney transplant pathology: a retrospective, multicentre, proof-of-concept study
Kers, Jesper, Bülow, Roman D, Klinkhammer, Barbara M, Breimer, Gerben E, Fontana, Francesco, Abiola, Adeyemi Adefidipe, Hofstraat, Rianne, Corthals, Garry L, Peters-Sengers, Hessel, Djudjaj, Sonja, von Stillfried, Saskia, Hölscher, David L, Pieters, Tobias T, van Zuilen, Arjan D, Bemelman, Frederike J, Nurmohamed, Azam S, Naesens, Maarten, Roelofs, Joris J T H, Florquin, Sandrine, Floege, Jürgen, Nguyen, Tri Q, Kather, Jakob N, Boor, Peter
Published in The Lancet. Digital health (01.01.2022)
Published in The Lancet. Digital health (01.01.2022)
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Detection of PatIent-Level distances from single cell genomics and pathomics data with Optimal Transport (PILOT)
Joodaki, Mehdi, Shaigan, Mina, Parra, Victor, Bülow, Roman D, Kuppe, Christoph, Hölscher, David L, Cheng, Mingbo, Nagai, James S, Goedertier, Michaël, Bouteldja, Nassim, Tesar, Vladimir, Barratt, Jonathan, Roberts, Ian SD, Coppo, Rosanna, Kramann, Rafael, Boor, Peter, Costa, Ivan G
Published in Molecular systems biology (02.02.2024)
Published in Molecular systems biology (02.02.2024)
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Extending the landscape of omics technologies by pathomics
Bülow, Roman D., Hölscher, David L., Costa, Ivan G., Boor, Peter
Published in NPJ systems biology and applications (07.08.2023)
Published in NPJ systems biology and applications (07.08.2023)
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Journal Article
Banff Digital Pathology Working Group: Image Bank, Artificial Intelligence Algorithm, and Challenge Trial Developments
Farris, Alton B, Alexander, Mariam P, Balis, Ulysses G J, Barisoni, Laura, Boor, Peter, Bülow, Roman D, Cornell, Lynn D, Demetris, Anthony J, Farkash, Evan, Hermsen, Meyke, Hogan, Julien, Kain, Renate, Kers, Jesper, Kong, Jun, Levenson, Richard M, Loupy, Alexandre, Naesens, Maarten, Sarder, Pinaki, Tomaszewski, John E, van der Laak, Jeroen, van Midden, Dominique, Yagi, Yukako, Solez, Kim
Published in Transplant international (2023)
Published in Transplant international (2023)
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Journal Article
Activation of Notch3 in Renal Tubular Cells Leads to Progressive Cystic Kidney Disease
Djudjaj, Sonja, Kavvadas, Panagiotis, Prakoura, Niki, Bülow, Roman D, Migeon, Tiffany, Placier, Sandrine, Chadjichristos, Christos E, Boor, Peter, Chatziantoniou, Christos
Published in International journal of molecular sciences (14.01.2022)
Published in International journal of molecular sciences (14.01.2022)
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Journal Article
Multisystemic Cellular Tropism of SARS-CoV-2 in Autopsies of COVID-19 Patients
Wong, Dickson W L, Klinkhammer, Barbara M, Djudjaj, Sonja, Villwock, Sophia, Timm, M Cherelle, Buhl, Eva M, Wucherpfennig, Sophie, Cacchi, Claudio, Braunschweig, Till, Knüchel-Clarke, Ruth, Jonigk, Danny, Werlein, Christopher, Bülow, Roman D, Dahl, Edgar, von Stillfried, Saskia, Boor, Peter
Published in Cells (Basel, Switzerland) (27.07.2021)
Published in Cells (Basel, Switzerland) (27.07.2021)
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SARS‐CoV‐2 RNA screening in routine pathology specimens
Stillfried, Saskia, Villwock, Sophia, Bülow, Roman D., Djudjaj, Sonja, Buhl, Eva M., Maurer, Angela, Ortiz‐Brüchle, Nadina, Celec, Peter, Klinkhammer, Barbara M., Wong, Dickson W.L., Cacchi, Claudio, Braunschweig, Till, Knüchel‐Clarke, Ruth, Dahl, Edgar, Boor, Peter
Published in Microbial biotechnology (01.07.2021)
Published in Microbial biotechnology (01.07.2021)
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Journal Article
Tackling stain variability using CycleGAN-based stain augmentation
Bouteldja, Nassim, Hölscher, David L., Bülow, Roman D., Roberts, Ian S.D., Coppo, Rosanna, Boor, Peter
Published in Journal of pathology informatics (01.01.2022)
Published in Journal of pathology informatics (01.01.2022)
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Journal Article
Complement activation induces excessive T cell cytotoxicity in severe COVID-19
Georg, Philipp, Astaburuaga-García, Rosario, Bonaguro, Lorenzo, Brumhard, Sophia, Michalick, Laura, Lippert, Lena J., Kostevc, Tomislav, Gäbel, Christiane, Schneider, Maria, Streitz, Mathias, Demichev, Vadim, Gemünd, Ioanna, Barone, Matthias, Tober-Lau, Pinkus, Helbig, Elisa T., Hillus, David, Petrov, Lev, Stein, Julia, Dey, Hannah-Philine, Paclik, Daniela, Iwert, Christina, Mülleder, Michael, Aulakh, Simran Kaur, Djudjaj, Sonja, Bülow, Roman D., Mei, Henrik E., Schulz, Axel R., Thiel, Andreas, Hippenstiel, Stefan, Saliba, Antoine-Emmanuel, Eils, Roland, Lehmann, Irina, Mall, Marcus A., Stricker, Sebastian, Röhmel, Jobst, Corman, Victor M., Beule, Dieter, Wyler, Emanuel, Landthaler, Markus, Obermayer, Benedikt, von Stillfried, Saskia, Boor, Peter, Demir, Münevver, Wesselmann, Hans, Suttorp, Norbert, Uhrig, Alexander, Müller-Redetzky, Holger, Nattermann, Jacob, Kuebler, Wolfgang M., Meisel, Christian, Ralser, Markus, Schultze, Joachim L., Aschenbrenner, Anna C., Thibeault, Charlotte, Kurth, Florian, Sander, Leif E., Blüthgen, Nils, Sawitzki, Birgit
Published in Cell (03.02.2022)
Published in Cell (03.02.2022)
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Vascular neutrophilic inflammation and immunothrombosis distinguish severe COVID‐19 from influenza pneumonia
Nicolai, Leo, Leunig, Alexander, Brambs, Sophia, Kaiser, Rainer, Joppich, Markus, Hoffknecht, Marie‐Louise, Gold, Christoph, Engel, Anouk, Polewka, Vivien, Muenchhoff, Maximilian, Hellmuth, Johannes C., Ruhle, Adrian, Ledderose, Stephan, Weinberger, Tobias, Schulz, Heiko, Scherer, Clemens, Rudelius, Martina, Zoller, Michael, Keppler, Oliver T., Zwißler, Bernhard, Bergwelt‐Baildon, Michael, Kääb, Stefan, Zimmer, Ralf, Bülow, Roman D., Stillfried, Saskia, Boor, Peter, Massberg, Steffen, Pekayvaz, Kami, Stark, Konstantin
Published in Journal of thrombosis and haemostasis (01.02.2021)
Published in Journal of thrombosis and haemostasis (01.02.2021)
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Journal Article
Keratins are novel markers of renal epithelial cell injury
Djudjaj, Sonja, Papasotiriou, Marios, Bülow, Roman D., Wagnerova, Alexandra, Lindenmeyer, Maja T., Cohen, Clemens D., Strnad, Pavel, Goumenos, Dimitrios S., Floege, Jürgen, Boor, Peter
Published in Kidney international (01.04.2016)
Published in Kidney international (01.04.2016)
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Journal Article
Finerenone Added to RAS/SGLT2 Blockade for CKD in Alport Syndrome. Results of a Randomized Controlled Trial with Col4a3-/- Mice
Zhu, Zhihui, Rosenkranz, Karoline A T, Kusunoki, Yoshihiro, Li, Chenyu, Klaus, Martin, Gross, Oliver, Angelotti, Maria-Lucia, Antonelli, Giulia, Cirillo, Luigi, Romagnani, Paola, Bouteldja, Nassim, Sadr, Alireza Vafaei, Bülow, Roman D, Boor, Peter, Anders, Hans-Joachim
Published in Journal of the American Society of Nephrology (01.09.2023)
Published in Journal of the American Society of Nephrology (01.09.2023)
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A multicenter blinded preclinical randomized controlled trial on Jak1/2 inhibition in MRL/MpJ-Faslpr mice with proliferative lupus nephritis predicts low effect size
Lei, Yutian, Sehnert, Bettina, Voll, Reinhard E., Jacobs-Cachá, Conxita, Soler, Maria Jose, Sanchez-Niño, Maria D., Ortiz, Alberto, Bülow, Roman D., Boor, Peter, Anders, Hans-Joachim
Published in Kidney international (01.06.2021)
Published in Kidney international (01.06.2021)
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Journal Article
Histopathological biomarkers for predicting the tumour accumulation of nanomedicines
May, Jan-Niklas, Moss, Jennifer I., Mueller, Florian, Golombek, Susanne K., Biancacci, Ilaria, Rizzo, Larissa, Elshafei, Asmaa Said, Gremse, Felix, Pola, Robert, Pechar, Michal, Etrych, Tomáš, Becker, Svea, Trautwein, Christian, Bülow, Roman D., Boor, Peter, Knuechel, Ruth, von Stillfried, Saskia, Storm, Gert, Puri, Sanyogitta, Barry, Simon T., Schulz, Volkmar, Kiessling, Fabian, Ashford, Marianne B., Lammers, Twan
Published in Nature biomedical engineering (01.11.2024)
Published in Nature biomedical engineering (01.11.2024)
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